RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 NEMFO60524 1076 aa17.59■□□□□ 0.41
CPSF1-205ENST00000531042 SEC24BO95487 1268 aa17.59■□□□□ 0.41
CPSF1-205ENST00000531042 TXKP42681 527 aa17.59■□□□□ 0.41
CPSF1-205ENST00000531042 MXD4Q14582 209 aaPredicted RBP17.59■□□□□ 0.41
CPSF1-205ENST00000531042 HFE2Q6ZVN8 426 aa17.59■□□□□ 0.41
CPSF1-205ENST00000531042 ZNF280BQ86YH2 543 aa17.59■□□□□ 0.41
CPSF1-205ENST00000531042 URGCPQ8TCY9 931 aa17.59■□□□□ 0.41
CPSF1-205ENST00000531042 BCL7CQ8WUZ0 217 aaPredicted RBP17.59■□□□□ 0.41
CPSF1-205ENST00000531042 MTMR9Q96QG7 549 aa17.59■□□□□ 0.41
CPSF1-205ENST00000531042 ANKEF1Q9NU02 776 aa17.59■□□□□ 0.41
CPSF1-205ENST00000531042 IRAK3Q9Y616 596 aa17.59■□□□□ 0.41
CPSF1-205ENST00000531042 CNTNAP2Q9UHC6 1331 aa17.58■□□□□ 0.4
CPSF1-205ENST00000531042 B4GALT3O60512 393 aa17.58■□□□□ 0.4
CPSF1-205ENST00000531042 CTSAP10619 480 aa17.58■□□□□ 0.4
CPSF1-205ENST00000531042 CA8P35219 290 aa17.58■□□□□ 0.4
CPSF1-205ENST00000531042 SLC11A1P49279 550 aa17.58■□□□□ 0.4
CPSF1-205ENST00000531042 AFF1P51825 1210 aaKnown RBP17.58■□□□□ 0.4
CPSF1-205ENST00000531042 PTENP60484 403 aa17.58■□□□□ 0.4
CPSF1-205ENST00000531042 PCBP1Q15365 356 aaKnown RBP eCLIP17.58■□□□□ 0.4
CPSF1-205ENST00000531042 TPRNQ4KMQ1 711 aa17.58■□□□□ 0.4
CPSF1-205ENST00000531042 AUTS2Q8WXX7 1259 aa17.58■□□□□ 0.4
CPSF1-205ENST00000531042 GBP3Q9H0R5 595 aa17.58■□□□□ 0.4
CPSF1-205ENST00000531042 RSAD1Q9HA92 442 aa17.58■□□□□ 0.4
CPSF1-205ENST00000531042 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.57■□□□□ 0.4
CPSF1-205ENST00000531042 DGAT1O75907 488 aa17.57■□□□□ 0.4
CPSF1-205ENST00000531042 DDHD2O94830 711 aa17.57■□□□□ 0.4
CPSF1-205ENST00000531042 ERLIN2O94905 339 aa17.57■□□□□ 0.4
CPSF1-205ENST00000531042 NCLP19338 710 aaKnown RBP17.57■□□□□ 0.4
CPSF1-205ENST00000531042 AXLP30530 894 aa17.57■□□□□ 0.4
CPSF1-205ENST00000531042 ZXDAP98168 799 aa17.57■□□□□ 0.4
CPSF1-205ENST00000531042 POU5F1BQ06416 359 aa17.57■□□□□ 0.4
CPSF1-205ENST00000531042 GIT2Q14161 759 aa17.57■□□□□ 0.4
CPSF1-205ENST00000531042 IFNLR1Q8IU57 520 aaPredicted RBP17.57■□□□□ 0.4
CPSF1-205ENST00000531042 SMG8Q8ND04 991 aaKnown RBP17.57■□□□□ 0.4
CPSF1-205ENST00000531042 CNNM3Q8NE01 707 aa17.57■□□□□ 0.4
CPSF1-205ENST00000531042 VN1R3Q9BXE9 311 aa17.57■□□□□ 0.4
CPSF1-205ENST00000531042 KANSL3Q9P2N6 904 aa17.57■□□□□ 0.4
CPSF1-205ENST00000531042 WDFY4Q6ZS81 3184 aa17.57■□□□□ 0.4
CPSF1-205ENST00000531042 TECTAO75443 2155 aa17.57■□□□□ 0.4
CPSF1-205ENST00000531042 TSPAN1O60635 241 aa17.56■□□□□ 0.4
CPSF1-205ENST00000531042 HOXD11P31277 338 aaPredicted RBP17.56■□□□□ 0.4
CPSF1-205ENST00000531042 ARL2P36404 184 aa17.56■□□□□ 0.4
CPSF1-205ENST00000531042 RARRES1P49788 294 aa17.56■□□□□ 0.4
CPSF1-205ENST00000531042 ITIH3Q06033 890 aa17.56■□□□□ 0.4
CPSF1-205ENST00000531042 CAPSQ13938 189 aa17.56■□□□□ 0.4
CPSF1-205ENST00000531042 TFDP1Q14186 410 aa17.56■□□□□ 0.4
CPSF1-205ENST00000531042 CES5AQ6NT32 575 aa17.56■□□□□ 0.4
CPSF1-205ENST00000531042 TRIM67Q6ZTA4 783 aa17.56■□□□□ 0.4
CPSF1-205ENST00000531042 ASAP3Q8TDY4 903 aa17.56■□□□□ 0.4
CPSF1-205ENST00000531042 PIGOQ8TEQ8 1089 aa17.56■□□□□ 0.4
CPSF1-205ENST00000531042 MFSD14AQ96MC6 490 aa17.56■□□□□ 0.4
CPSF1-205ENST00000531042 TMEM175Q9BSA9 504 aa17.56■□□□□ 0.4
CPSF1-205ENST00000531042 EIF2AQ9BY44 585 aaKnown RBP17.56■□□□□ 0.4
CPSF1-205ENST00000531042 TMEM60Q9H2L4 133 aa17.56■□□□□ 0.4
CPSF1-205ENST00000531042 ADAM7Q9H2U9 754 aa17.56■□□□□ 0.4
CPSF1-205ENST00000531042 UBN1Q9NPG3 1134 aa17.56■□□□□ 0.4
CPSF1-205ENST00000531042 CDH22Q9UJ99 828 aa17.56■□□□□ 0.4
CPSF1-205ENST00000531042 LIMCH1Q9UPQ0 1083 aa17.56■□□□□ 0.4
CPSF1-205ENST00000531042 MUC6Q6W4X9 2439 aa17.55■□□□□ 0.4
CPSF1-205ENST00000531042 POTEMA6NI47 508 aa17.55■□□□□ 0.4
CPSF1-205ENST00000531042 INO80B-WBP1J3KQ70 363 aa17.55■□□□□ 0.4
CPSF1-205ENST00000531042 POMCP01189 267 aa17.55■□□□□ 0.4
CPSF1-205ENST00000531042 ALDH2P05091 517 aa17.55■□□□□ 0.4
CPSF1-205ENST00000531042 XRCC6P12956 609 aaKnown RBP eCLIP17.55■□□□□ 0.42e-8■□□□□ 10.1
CPSF1-205ENST00000531042 ITGA4P13612 1032 aa17.55■□□□□ 0.4
CPSF1-205ENST00000531042 MBTD1Q05BQ5 628 aa17.55■□□□□ 0.4
CPSF1-205ENST00000531042 NCBP1Q09161 790 aaKnown RBP17.55■□□□□ 0.4
CPSF1-205ENST00000531042 SAFBQ15424 915 aaKnown RBP eCLIP17.55■□□□□ 0.4
CPSF1-205ENST00000531042 NOTUMQ6P988 496 aa17.55■□□□□ 0.4
CPSF1-205ENST00000531042 BMP8AQ7Z5Y6 402 aa17.55■□□□□ 0.4
CPSF1-205ENST00000531042 TMEM87AQ8NBN3 555 aa17.55■□□□□ 0.4
CPSF1-205ENST00000531042 CCDC51Q96ER9 411 aa17.55■□□□□ 0.4
CPSF1-205ENST00000531042 CPB2Q96IY4 423 aa17.55■□□□□ 0.4
CPSF1-205ENST00000531042 CCDC43Q96MW1 224 aaKnown RBP17.55■□□□□ 0.4
CPSF1-205ENST00000531042 FAM193BQ96PV7 902 aaPredicted RBP17.55■□□□□ 0.4
CPSF1-205ENST00000531042 KCNH6Q9H252 994 aa17.55■□□□□ 0.4
CPSF1-205ENST00000531042 STK39Q9UEW8 545 aa17.55■□□□□ 0.4
CPSF1-205ENST00000531042 FAN1Q9Y2M0 1017 aa17.55■□□□□ 0.4
CPSF1-205ENST00000531042 IPPQ9Y573 584 aa17.55■□□□□ 0.4
CPSF1-205ENST00000531042 A0A087WWV3 80 aa17.54■□□□□ 0.4
CPSF1-205ENST00000531042 TMEM221A6NGB7 291 aa17.54■□□□□ 0.4
CPSF1-205ENST00000531042 M0R296 226 aa17.54■□□□□ 0.4
CPSF1-205ENST00000531042 NRP1O14786 923 aa17.54■□□□□ 0.4
CPSF1-205ENST00000531042 INPPL1O15357 1258 aa17.54■□□□□ 0.4
CPSF1-205ENST00000531042 SPATA31C1P0DKV0 1188 aa17.54■□□□□ 0.4
CPSF1-205ENST00000531042 EPCAMP16422 314 aa17.54■□□□□ 0.4
CPSF1-205ENST00000531042 ATP2B1P20020 1258 aa17.54■□□□□ 0.4
CPSF1-205ENST00000531042 GLRA2P23416 452 aa17.54■□□□□ 0.4
CPSF1-205ENST00000531042 MCM7P33993 719 aa17.54■□□□□ 0.4
CPSF1-205ENST00000531042 GUCY1B3Q02153 619 aa17.54■□□□□ 0.4
CPSF1-205ENST00000531042 PTPN14Q15678 1187 aa17.54■□□□□ 0.4
CPSF1-205ENST00000531042 AMHR2Q16671 573 aa17.54■□□□□ 0.4
CPSF1-205ENST00000531042 CCDC83Q8IWF9 413 aa17.54■□□□□ 0.4
CPSF1-205ENST00000531042 SLC22A17Q8WUG5 538 aa17.54■□□□□ 0.4
CPSF1-205ENST00000531042 NECTIN4Q96NY8 510 aa17.54■□□□□ 0.4
CPSF1-205ENST00000531042 NFKBIZQ9BYH8 718 aa17.54■□□□□ 0.4
CPSF1-205ENST00000531042 CSRNP2Q9H175 543 aa17.54■□□□□ 0.4
CPSF1-205ENST00000531042 RNF39Q9H2S5 420 aa17.54■□□□□ 0.4
CPSF1-205ENST00000531042 POMKQ9H5K3 350 aa17.54■□□□□ 0.4
CPSF1-205ENST00000531042 DZANK1Q9NVP4 752 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms