RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 TTLL13PA6NNM8 815 aa13.11□□□□□ -0.31
LTBP3-219ENST00000530990 CCDC169A6NNP5 214 aa13.11□□□□□ -0.31
LTBP3-219ENST00000530990 PRKCBP05771 671 aa13.11□□□□□ -0.31
LTBP3-219ENST00000530990 LINC00271P0C7V0 271 aa13.11□□□□□ -0.31
LTBP3-219ENST00000530990 AXLP30530 894 aa13.11□□□□□ -0.31
LTBP3-219ENST00000530990 NUCB2P80303 420 aa13.11□□□□□ -0.31
LTBP3-219ENST00000530990 BTG3Q14201 252 aaPredicted RBP13.11□□□□□ -0.31
LTBP3-219ENST00000530990 NOTUMQ6P988 496 aa13.11□□□□□ -0.31
LTBP3-219ENST00000530990 CDR2LQ86X02 465 aaPredicted RBP13.11□□□□□ -0.31
LTBP3-219ENST00000530990 CMTR2Q8IYT2 770 aaKnown RBP13.11□□□□□ -0.31
LTBP3-219ENST00000530990 MYLIPQ8WY64 445 aa13.11□□□□□ -0.31
LTBP3-219ENST00000530990 ARNTL2Q8WYA1 636 aa13.11□□□□□ -0.31
LTBP3-219ENST00000530990 PRIMPOLQ96LW4 560 aa13.11□□□□□ -0.31
LTBP3-219ENST00000530990 CDX2Q99626 313 aaPredicted RBP13.11□□□□□ -0.31
LTBP3-219ENST00000530990 C17orf80Q9BSJ5 609 aa13.11□□□□□ -0.31
LTBP3-219ENST00000530990 TRAIPQ9BWF2 469 aa13.11□□□□□ -0.31
LTBP3-219ENST00000530990 FZD8Q9H461 694 aa13.11□□□□□ -0.31
LTBP3-219ENST00000530990 C17orf75Q9HAS0 396 aa13.11□□□□□ -0.31
LTBP3-219ENST00000530990 PRMT7Q9NVM4 692 aaPredicted RBP13.11□□□□□ -0.31
LTBP3-219ENST00000530990 ARHGAP28Q9P2N2 729 aa13.11□□□□□ -0.31
LTBP3-219ENST00000530990 HCSTQ9UBK5 93 aa13.11□□□□□ -0.31
LTBP3-219ENST00000530990 ODF2LQ9ULJ1 636 aa13.11□□□□□ -0.31
LTBP3-219ENST00000530990 TBKBP1A7MCY6 615 aa13.1□□□□□ -0.31
LTBP3-219ENST00000530990 MEIS3P2A8K0S8 358 aa13.1□□□□□ -0.31
LTBP3-219ENST00000530990 SLC16A4O15374 487 aa13.1□□□□□ -0.31
LTBP3-219ENST00000530990 KRT18P05783 430 aaKnown RBP13.1□□□□□ -0.31
LTBP3-219ENST00000530990 PLS3P13797 630 aa13.1□□□□□ -0.31
LTBP3-219ENST00000530990 RAB27AP51159 221 aa13.1□□□□□ -0.31
LTBP3-219ENST00000530990 ERVK-21P61565 698 aa13.1□□□□□ -0.31
LTBP3-219ENST00000530990 GIT2Q14161 759 aa13.1□□□□□ -0.31
LTBP3-219ENST00000530990 E2F4Q16254 413 aa13.1□□□□□ -0.31
LTBP3-219ENST00000530990 MAPK6Q16659 721 aa13.1□□□□□ -0.31
LTBP3-219ENST00000530990 FAM187BQ17R55 369 aa13.1□□□□□ -0.31
LTBP3-219ENST00000530990 LONRF3Q496Y0 759 aa13.1□□□□□ -0.31
LTBP3-219ENST00000530990 CLLU1OSQ5K130 101 aa13.1□□□□□ -0.31
LTBP3-219ENST00000530990 RESP18Q5W5W9 173 aa13.1□□□□□ -0.31
LTBP3-219ENST00000530990 FIBCD1Q8N539 461 aa13.1□□□□□ -0.31
LTBP3-219ENST00000530990 GDPD5Q8WTR4 605 aa13.1□□□□□ -0.31
LTBP3-219ENST00000530990 LPPQ93052 612 aa13.1□□□□□ -0.31
LTBP3-219ENST00000530990 TGS1Q96RS0 853 aaKnown RBP13.1□□□□□ -0.31
LTBP3-219ENST00000530990 EIF2AQ9BY44 585 aaKnown RBP13.1□□□□□ -0.31
LTBP3-219ENST00000530990 GDPD2Q9HCC8 539 aa13.1□□□□□ -0.31
LTBP3-219ENST00000530990 KMT5AQ9NQR1 393 aa13.1□□□□□ -0.31
LTBP3-219ENST00000530990 RNF216Q9NWF9 866 aaPredicted RBP13.1□□□□□ -0.31
LTBP3-219ENST00000530990 USP20Q9Y2K6 914 aa13.1□□□□□ -0.31
LTBP3-219ENST00000530990 PCDHB2Q9Y5E7 798 aa13.1□□□□□ -0.31
LTBP3-219ENST00000530990 MRPL42Q9Y6G3 142 aaKnown RBP13.1□□□□□ -0.31
LTBP3-219ENST00000530990 MYMKA6NI61 221 aa13.09□□□□□ -0.31
LTBP3-219ENST00000530990 RFXAPO00287 272 aa13.09□□□□□ -0.31
LTBP3-219ENST00000530990 HOXA2O43364 376 aa13.09□□□□□ -0.31
LTBP3-219ENST00000530990 TBCAO75347 108 aaKnown RBP13.09□□□□□ -0.31
LTBP3-219ENST00000530990 FAM13AO94988 1023 aa13.09□□□□□ -0.31
LTBP3-219ENST00000530990 EOMESO95936 686 aa13.09□□□□□ -0.31
LTBP3-219ENST00000530990 SKIP12755 728 aa13.09□□□□□ -0.31
LTBP3-219ENST00000530990 ZNF131P52739 623 aa13.09□□□□□ -0.31
LTBP3-219ENST00000530990 EFNA5P52803 228 aa13.09□□□□□ -0.31
LTBP3-219ENST00000530990 PRPF4BQ13523 1007 aaKnown RBP13.09□□□□□ -0.31
LTBP3-219ENST00000530990 DYMQ7RTS9 669 aa13.09□□□□□ -0.31
LTBP3-219ENST00000530990 TAS1R3Q7RTX0 852 aa13.09□□□□□ -0.31
LTBP3-219ENST00000530990 SMG8Q8ND04 991 aaKnown RBP13.09□□□□□ -0.31
LTBP3-219ENST00000530990 HELQQ8TDG4 1101 aa13.09□□□□□ -0.31
LTBP3-219ENST00000530990 DHX58Q96C10 678 aa13.09□□□□□ -0.31
LTBP3-219ENST00000530990 CCDC51Q96ER9 411 aa13.09□□□□□ -0.31
LTBP3-219ENST00000530990 CASD1Q96PB1 797 aa13.09□□□□□ -0.31
LTBP3-219ENST00000530990 TMEM117Q9H0C3 514 aa13.09□□□□□ -0.31
LTBP3-219ENST00000530990 PDZD7Q9H5P4 517 aa13.09□□□□□ -0.31
LTBP3-219ENST00000530990 TRIP11Q15643 1979 aa13.09□□□□□ -0.31
LTBP3-219ENST00000530990 A0A1B0GUA9 196 aa13.08□□□□□ -0.32
LTBP3-219ENST00000530990 ACKR2O00590 384 aa13.08□□□□□ -0.32
LTBP3-219ENST00000530990 ZNF623O75123 536 aa13.08□□□□□ -0.32
LTBP3-219ENST00000530990 NPTXRO95502 500 aa13.08□□□□□ -0.32
LTBP3-219ENST00000530990 CTNNB1P35222 781 aa13.08□□□□□ -0.32
LTBP3-219ENST00000530990 NCKAP1LP55160 1127 aa13.08□□□□□ -0.32
LTBP3-219ENST00000530990 NCBP1Q09161 790 aaKnown RBP13.08□□□□□ -0.32
LTBP3-219ENST00000530990 ADGRE1Q14246 886 aa13.08□□□□□ -0.32
LTBP3-219ENST00000530990 TMEM132AQ24JP5 1023 aa13.08□□□□□ -0.32
LTBP3-219ENST00000530990 EPC2Q52LR7 807 aa13.08□□□□□ -0.32
LTBP3-219ENST00000530990 SLC27A1Q6PCB7 646 aa13.08□□□□□ -0.32
LTBP3-219ENST00000530990 SV2BQ7L1I2 683 aa13.08□□□□□ -0.32
LTBP3-219ENST00000530990 ABI1Q8IZP0 508 aa13.08□□□□□ -0.32
LTBP3-219ENST00000530990 TMEM161BQ8NDZ6 487 aa13.08□□□□□ -0.32
LTBP3-219ENST00000530990 FBXO22Q8NEZ5 403 aa13.08□□□□□ -0.32
LTBP3-219ENST00000530990 SPIRE2Q8WWL2 714 aa13.08□□□□□ -0.32
LTBP3-219ENST00000530990 DDX12PQ92771 950 aa13.08□□□□□ -0.32
LTBP3-219ENST00000530990 STAMQ92783 540 aa13.08□□□□□ -0.32
LTBP3-219ENST00000530990 CLP1Q92989 425 aaKnown RBP13.08□□□□□ -0.32
LTBP3-219ENST00000530990 SCAND2PQ9GZW5 306 aaPredicted RBP13.08□□□□□ -0.32
LTBP3-219ENST00000530990 NXF3Q9H4D5 531 aaKnown RBP13.08□□□□□ -0.32
LTBP3-219ENST00000530990 ZHX3Q9H4I2 956 aa13.08□□□□□ -0.32
LTBP3-219ENST00000530990 TMEM134Q9H6X4 195 aa13.08□□□□□ -0.32
LTBP3-219ENST00000530990 PARVGQ9HBI0 331 aa13.08□□□□□ -0.32
LTBP3-219ENST00000530990 FAM13BQ9NYF5 915 aa13.08□□□□□ -0.32
LTBP3-219ENST00000530990 LARSQ9P2J5 1176 aaKnown RBP13.08□□□□□ -0.32
LTBP3-219ENST00000530990 HES2Q9Y543 173 aa13.08□□□□□ -0.32
LTBP3-219ENST00000530990 IPPQ9Y573 584 aa13.08□□□□□ -0.32
LTBP3-219ENST00000530990 CITO14578 2027 aa13.07□□□□□ -0.32
LTBP3-219ENST00000530990 K7ENM7 598 aa13.07□□□□□ -0.32
LTBP3-219ENST00000530990 K7ERI5 159 aa13.07□□□□□ -0.32
LTBP3-219ENST00000530990 N4BP3O15049 544 aa13.07□□□□□ -0.32
LTBP3-219ENST00000530990 POLR2DO15514 142 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms