RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 PRMT7Q9NVM4 692 aaPredicted RBP16.87■□□□□ 0.29
CCS-206ENST00000530961 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.86■□□□□ 0.29
CCS-206ENST00000530961 ACTN4O43707 911 aaKnown RBP16.86■□□□□ 0.29
CCS-206ENST00000530961 GAP43P17677 238 aa16.86■□□□□ 0.29
CCS-206ENST00000530961 ABCD1P33897 745 aa16.86■□□□□ 0.29
CCS-206ENST00000530961 CACNB1Q02641 598 aaPredicted RBP16.86■□□□□ 0.29
CCS-206ENST00000530961 PPP4R3CPQ6ZMV5 832 aa16.86■□□□□ 0.29
CCS-206ENST00000530961 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.86■□□□□ 0.29
CCS-206ENST00000530961 SLC24A5Q71RS6 500 aa16.86■□□□□ 0.29
CCS-206ENST00000530961 TOP1MTQ969P6 601 aa16.86■□□□□ 0.29
CCS-206ENST00000530961 DNAJC19Q96DA6 116 aa16.86■□□□□ 0.29
CCS-206ENST00000530961 C7orf25Q9BPX7 421 aa16.86■□□□□ 0.29
CCS-206ENST00000530961 ZHX3Q9H4I2 956 aa16.86■□□□□ 0.29
CCS-206ENST00000530961 ARHGAP28Q9P2N2 729 aa16.86■□□□□ 0.29
CCS-206ENST00000530961 SEL1LQ9UBV2 794 aa16.86■□□□□ 0.29
CCS-206ENST00000530961 SERTAD1Q9UHV2 236 aa16.86■□□□□ 0.29
CCS-206ENST00000530961 PIN4Q9Y237 131 aaKnown RBP16.86■□□□□ 0.29
CCS-206ENST00000530961 K7ERI5 159 aa16.85■□□□□ 0.29
CCS-206ENST00000530961 ACKR2O00590 384 aa16.85■□□□□ 0.29
CCS-206ENST00000530961 TRAK2O60296 914 aa16.85■□□□□ 0.29
CCS-206ENST00000530961 MGEA5O60502 916 aa16.85■□□□□ 0.29
CCS-206ENST00000530961 ZNF202O95125 648 aa16.85■□□□□ 0.29
CCS-206ENST00000530961 MYL1P05976 194 aa16.85■□□□□ 0.29
CCS-206ENST00000530961 HOXA11P31270 313 aaPredicted RBP16.85■□□□□ 0.29
CCS-206ENST00000530961 MRE11P49959 708 aa16.85■□□□□ 0.29
CCS-206ENST00000530961 FAM189BP81408 668 aa16.85■□□□□ 0.29
CCS-206ENST00000530961 LONRF3Q496Y0 759 aa16.85■□□□□ 0.29
CCS-206ENST00000530961 TPRNQ4KMQ1 711 aa16.85■□□□□ 0.29
CCS-206ENST00000530961 TMEM31Q5JXX7 168 aa16.85■□□□□ 0.29
CCS-206ENST00000530961 CCDC65Q8IXS2 484 aa16.85■□□□□ 0.29
CCS-206ENST00000530961 MYOCDQ8IZQ8 938 aa16.85■□□□□ 0.29
CCS-206ENST00000530961 LINC01599Q8WXQ3 324 aa16.85■□□□□ 0.29
CCS-206ENST00000530961 CCDC51Q96ER9 411 aa16.85■□□□□ 0.29
CCS-206ENST00000530961 KIFC3Q9BVG8 833 aa16.85■□□□□ 0.29
CCS-206ENST00000530961 TRIM9Q9C026 710 aa16.85■□□□□ 0.29
CCS-206ENST00000530961 CCDC113Q9H0I3 377 aa16.85■□□□□ 0.29
CCS-206ENST00000530961 GOLPH3LQ9H4A5 285 aa16.85■□□□□ 0.29
CCS-206ENST00000530961 A0A0U1RQF3 1178 aa16.84■□□□□ 0.29
CCS-206ENST00000530961 FRMD3A2A2Y4 597 aa16.84■□□□□ 0.29
CCS-206ENST00000530961 C9IYK1 514 aa16.84■□□□□ 0.29
CCS-206ENST00000530961 TSPAN1O60635 241 aa16.84■□□□□ 0.29
CCS-206ENST00000530961 STAG3L1P0CL83 205 aa16.84■□□□□ 0.29
CCS-206ENST00000530961 MAPTP10636 758 aaKnown RBP16.84■□□□□ 0.29
CCS-206ENST00000530961 SKIP12755 728 aa16.84■□□□□ 0.29
CCS-206ENST00000530961 SARSP49591 514 aaKnown RBP16.84■□□□□ 0.29
CCS-206ENST00000530961 DEFB103AP81534 67 aa16.84■□□□□ 0.29
CCS-206ENST00000530961 FAM160A1Q05DH4 1040 aa16.84■□□□□ 0.29
CCS-206ENST00000530961 AMHR2Q16671 573 aa16.84■□□□□ 0.29
CCS-206ENST00000530961 TWF2Q6IBS0 349 aaKnown RBP16.84■□□□□ 0.29
CCS-206ENST00000530961 KANK3Q6NY19 840 aa16.84■□□□□ 0.29
CCS-206ENST00000530961 NOTUMQ6P988 496 aa16.84■□□□□ 0.29
CCS-206ENST00000530961 HERC6Q8IVU3 1022 aa16.84■□□□□ 0.29
CCS-206ENST00000530961 FAM178BQ8IXR5 827 aa16.84■□□□□ 0.29
CCS-206ENST00000530961 TMEM161BQ8NDZ6 487 aa16.84■□□□□ 0.29
CCS-206ENST00000530961 CNNM3Q8NE01 707 aa16.84■□□□□ 0.29
CCS-206ENST00000530961 STAMQ92783 540 aa16.84■□□□□ 0.29
CCS-206ENST00000530961 PAGE5Q96GU1 130 aa16.84■□□□□ 0.29
CCS-206ENST00000530961 GBP4Q96PP9 640 aa16.84■□□□□ 0.29
CCS-206ENST00000530961 ELAC1Q9H777 363 aaKnown RBP16.84■□□□□ 0.29
CCS-206ENST00000530961 ADGRA3Q8IWK6 1321 aa16.84■□□□□ 0.29
CCS-206ENST00000530961 A0A1B0GUA9 196 aa16.83■□□□□ 0.28
CCS-206ENST00000530961 PVALEFA0A1B0GWK0 134 aa16.83■□□□□ 0.28
CCS-206ENST00000530961 SLC16A4O15374 487 aa16.83■□□□□ 0.28
CCS-206ENST00000530961 GJB5O95377 273 aa16.83■□□□□ 0.28
CCS-206ENST00000530961 PRKCBP05771 671 aa16.83■□□□□ 0.28
CCS-206ENST00000530961 IDEP14735 1019 aa16.83■□□□□ 0.28
CCS-206ENST00000530961 AFMP43652 599 aa16.83■□□□□ 0.28
CCS-206ENST00000530961 RAB27AP51159 221 aa16.83■□□□□ 0.28
CCS-206ENST00000530961 NCKAP1LP55160 1127 aa16.83■□□□□ 0.28
CCS-206ENST00000530961 UBE2HP62256 183 aa16.83■□□□□ 0.28
CCS-206ENST00000530961 STRN3Q13033 797 aa16.83■□□□□ 0.28
CCS-206ENST00000530961 PRPF4BQ13523 1007 aaKnown RBP16.83■□□□□ 0.28
CCS-206ENST00000530961 HERC4Q5GLZ8 1057 aaPredicted RBP16.83■□□□□ 0.28
CCS-206ENST00000530961 KRBA2Q6ZNG9 492 aa16.83■□□□□ 0.28
CCS-206ENST00000530961 NPAS4Q8IUM7 802 aa16.83■□□□□ 0.28
CCS-206ENST00000530961 FMR1NBQ8N0W7 255 aaPredicted RBP16.83■□□□□ 0.28
CCS-206ENST00000530961 ZBED2Q9BTP6 218 aa16.83■□□□□ 0.28
CCS-206ENST00000530961 ST6GALNAC4Q9H4F1 302 aa16.83■□□□□ 0.28
CCS-206ENST00000530961 PANK4Q9NVE7 773 aa16.83■□□□□ 0.28
CCS-206ENST00000530961 PCDHB7Q9Y5E2 793 aa16.83■□□□□ 0.28
CCS-206ENST00000530961 CNTNAP2Q9UHC6 1331 aa16.82■□□□□ 0.28
CCS-206ENST00000530961 ZNF623O75123 536 aa16.82■□□□□ 0.28
CCS-206ENST00000530961 EOMESO95936 686 aa16.82■□□□□ 0.28
CCS-206ENST00000530961 ARF4P18085 180 aaPredicted RBP16.82■□□□□ 0.28
CCS-206ENST00000530961 ASIC1P78348 528 aa16.82■□□□□ 0.28
CCS-206ENST00000530961 SNW1Q13573 536 aaKnown RBP16.82■□□□□ 0.28
CCS-206ENST00000530961 RAB30Q15771 203 aa16.82■□□□□ 0.28
CCS-206ENST00000530961 ZNF720Q7Z2F6 126 aa16.82■□□□□ 0.28
CCS-206ENST00000530961 HAUS6Q7Z4H7 955 aa16.82■□□□□ 0.28
CCS-206ENST00000530961 CRIPAKQ8N1N5 446 aa16.82■□□□□ 0.28
CCS-206ENST00000530961 ENGASEQ8NFI3 743 aa16.82■□□□□ 0.28
CCS-206ENST00000530961 PPM1EQ8WY54 764 aa16.82■□□□□ 0.28
CCS-206ENST00000530961 TIGD1Q96MW7 591 aa16.82■□□□□ 0.28
CCS-206ENST00000530961 FIZ1Q96SL8 496 aa16.82■□□□□ 0.28
CCS-206ENST00000530961 RAD9AQ99638 391 aa16.82■□□□□ 0.28
CCS-206ENST00000530961 OLFML3Q9NRN5 406 aa16.82■□□□□ 0.28
CCS-206ENST00000530961 TMEM161AQ9NX61 479 aa16.82■□□□□ 0.28
CCS-206ENST00000530961 LRFN2Q9ULH4 789 aa16.82■□□□□ 0.28
CCS-206ENST00000530961 RBAK-RBAKDNI3L0D1 243 aa16.81■□□□□ 0.28
CCS-206ENST00000530961 B4GALT5O43286 388 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms