RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 ENPEPQ07075 957 aa18.61■□□□□ 0.57
BRCA2-204ENST00000530893 MTMR2Q13614 643 aa18.61■□□□□ 0.57
BRCA2-204ENST00000530893 UGCGQ16739 394 aa18.61■□□□□ 0.57
BRCA2-204ENST00000530893 XKR9Q5GH70 373 aa18.61■□□□□ 0.57
BRCA2-204ENST00000530893 OTUD6AQ7L8S5 288 aa18.61■□□□□ 0.57
BRCA2-204ENST00000530893 USP37Q86T82 979 aa18.61■□□□□ 0.57
BRCA2-204ENST00000530893 MAP4K3Q8IVH8 894 aa18.61■□□□□ 0.57
BRCA2-204ENST00000530893 SEC14L1Q92503 715 aa18.61■□□□□ 0.57
BRCA2-204ENST00000530893 LRRC45Q96CN5 670 aa18.61■□□□□ 0.57
BRCA2-204ENST00000530893 NTPCRQ9BSD7 190 aaKnown RBP18.61■□□□□ 0.57
BRCA2-204ENST00000530893 AP1M1Q9BXS5 423 aa18.61■□□□□ 0.57
BRCA2-204ENST00000530893 THAP2Q9H0W7 228 aa18.61■□□□□ 0.57
BRCA2-204ENST00000530893 MIF4GDA9UHW6 222 aaKnown RBP18.61■□□□□ 0.57
BRCA2-204ENST00000530893 SLC16A4O15374 487 aa18.61■□□□□ 0.57
BRCA2-204ENST00000530893 DDX3YO15523 660 aaKnown RBP18.61■□□□□ 0.57
BRCA2-204ENST00000530893 PPFIA4O75335 1185 aa18.61■□□□□ 0.57
BRCA2-204ENST00000530893 CCND2P30279 289 aa18.61■□□□□ 0.57
BRCA2-204ENST00000530893 GCLMP48507 274 aa18.61■□□□□ 0.57
BRCA2-204ENST00000530893 OAZ1P54368 228 aa18.61■□□□□ 0.57
BRCA2-204ENST00000530893 SKOR1P84550 965 aa18.61■□□□□ 0.57
BRCA2-204ENST00000530893 DMP1Q13316 513 aaPredicted RBP18.61■□□□□ 0.57
BRCA2-204ENST00000530893 C11orf63Q6NUN7 778 aa18.61■□□□□ 0.57
BRCA2-204ENST00000530893 SPIRE2Q8WWL2 714 aa18.61■□□□□ 0.57
BRCA2-204ENST00000530893 KIFAP3Q92845 792 aa18.61■□□□□ 0.57
BRCA2-204ENST00000530893 MOV10L1Q9BXT6 1211 aaKnown RBP18.61■□□□□ 0.57
BRCA2-204ENST00000530893 MAF1Q9H063 256 aa18.61■□□□□ 0.57
BRCA2-204ENST00000530893 SEPT11Q9NVA2 429 aaKnown RBP18.61■□□□□ 0.57
BRCA2-204ENST00000530893 TBX20Q9UMR3 447 aa18.61■□□□□ 0.57
BRCA2-204ENST00000530893 PCDHA10Q9Y5I2 948 aa18.61■□□□□ 0.57
BRCA2-204ENST00000530893 DOCK1Q14185 1865 aa18.6■□□□□ 0.57
BRCA2-204ENST00000530893 TISP43B9A030 160 aa18.6■□□□□ 0.57
BRCA2-204ENST00000530893 ATP9AO75110 1047 aa18.6■□□□□ 0.57
BRCA2-204ENST00000530893 CCNE2O96020 404 aa18.6■□□□□ 0.57
BRCA2-204ENST00000530893 GZMAP12544 262 aa18.6■□□□□ 0.57
BRCA2-204ENST00000530893 ABCD1P33897 745 aa18.6■□□□□ 0.57
BRCA2-204ENST00000530893 TTMPQ5BVD1 217 aa18.6■□□□□ 0.57
BRCA2-204ENST00000530893 FAM102BQ5T8I3 360 aa18.6■□□□□ 0.57
BRCA2-204ENST00000530893 EMC10Q5UCC4 262 aa18.6■□□□□ 0.57
BRCA2-204ENST00000530893 LRIG3Q6UXM1 1119 aa18.6■□□□□ 0.57
BRCA2-204ENST00000530893 NLRX1Q86UT6 975 aa18.6■□□□□ 0.57
BRCA2-204ENST00000530893 VSIG10LQ86VR7 867 aa18.6■□□□□ 0.57
BRCA2-204ENST00000530893 ARHGEF19Q8IW93 802 aa18.6■□□□□ 0.57
BRCA2-204ENST00000530893 TMEM161BQ8NDZ6 487 aa18.6■□□□□ 0.57
BRCA2-204ENST00000530893 MORC4Q8TE76 937 aa18.6■□□□□ 0.57
BRCA2-204ENST00000530893 CAPS2Q9BXY5 557 aa18.6■□□□□ 0.57
BRCA2-204ENST00000530893 TMEM117Q9H0C3 514 aa18.6■□□□□ 0.57
BRCA2-204ENST00000530893 AS3MTQ9HBK9 375 aa18.6■□□□□ 0.57
BRCA2-204ENST00000530893 COQ4Q9Y3A0 265 aa18.6■□□□□ 0.57
BRCA2-204ENST00000530893 IGSF9BQ9UPX0 1349 aa18.59■□□□□ 0.57
BRCA2-204ENST00000530893 TESPA1A2RU30 521 aaPredicted RBP18.59■□□□□ 0.57
BRCA2-204ENST00000530893 RTN2O75298 545 aa18.59■□□□□ 0.57
BRCA2-204ENST00000530893 ECHS1P30084 290 aa18.59■□□□□ 0.57
BRCA2-204ENST00000530893 GUCY2FP51841 1108 aa18.59■□□□□ 0.57
BRCA2-204ENST00000530893 MFAP3P55082 362 aa18.59■□□□□ 0.57
BRCA2-204ENST00000530893 GPC5P78333 572 aa18.59■□□□□ 0.57
BRCA2-204ENST00000530893 HLTFQ14527 1009 aaKnown RBP eCLIP18.59■□□□□ 0.57
BRCA2-204ENST00000530893 SNRNP35Q16560 246 aaKnown RBP18.59■□□□□ 0.57
BRCA2-204ENST00000530893 DCAF15Q66K64 600 aa18.59■□□□□ 0.57
BRCA2-204ENST00000530893 FAM71AQ8IYT1 594 aa18.59■□□□□ 0.57
BRCA2-204ENST00000530893 PIK3R5Q8WYR1 880 aa18.59■□□□□ 0.57
BRCA2-204ENST00000530893 ARHGEF26Q96DR7 871 aa18.59■□□□□ 0.57
BRCA2-204ENST00000530893 DDX47Q9H0S4 455 aaKnown RBP18.59■□□□□ 0.57
BRCA2-204ENST00000530893 GOLGA6L10A0A0M3HER8 536 aa18.59■□□□□ 0.57
BRCA2-204ENST00000530893 TULP2O00295 520 aa18.59■□□□□ 0.57
BRCA2-204ENST00000530893 FGGP02679 453 aa18.59■□□□□ 0.57
BRCA2-204ENST00000530893 GTF2H1P32780 548 aa18.59■□□□□ 0.57
BRCA2-204ENST00000530893 BACE1P56817 501 aa18.59■□□□□ 0.57
BRCA2-204ENST00000530893 KRT39Q6A163 491 aa18.59■□□□□ 0.57
BRCA2-204ENST00000530893 NSMFQ6X4W1 530 aa18.59■□□□□ 0.57
BRCA2-204ENST00000530893 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.59■□□□□ 0.57
BRCA2-204ENST00000530893 TMC2Q8TDI7 906 aa18.59■□□□□ 0.57
BRCA2-204ENST00000530893 ATP6V0A1Q93050 837 aa18.59■□□□□ 0.57
BRCA2-204ENST00000530893 FAM114A2Q9NRY5 505 aa18.59■□□□□ 0.57
BRCA2-204ENST00000530893 RNF146Q9NTX7 359 aa18.59■□□□□ 0.57
BRCA2-204ENST00000530893 TAS2R14Q9NYV8 317 aa18.59■□□□□ 0.57
BRCA2-204ENST00000530893 UTP11Q9Y3A2 253 aaKnown RBP18.59■□□□□ 0.57
BRCA2-204ENST00000530893 ZNF233A6NK53 670 aa18.58■□□□□ 0.56
BRCA2-204ENST00000530893 MTA2O94776 668 aa18.58■□□□□ 0.56
BRCA2-204ENST00000530893 FTLP02792 175 aaPredicted RBP18.58■□□□□ 0.56
BRCA2-204ENST00000530893 HSPA6P17066 643 aa18.58■□□□□ 0.56
BRCA2-204ENST00000530893 CNGA1P29973 690 aa18.58■□□□□ 0.56
BRCA2-204ENST00000530893 NPTX2P47972 431 aa18.58■□□□□ 0.56
BRCA2-204ENST00000530893 IRAK1P51617 712 aa18.58■□□□□ 0.56
BRCA2-204ENST00000530893 RTP1P59025 263 aa18.58■□□□□ 0.56
BRCA2-204ENST00000530893 PTENP60484 403 aa18.58■□□□□ 0.56
BRCA2-204ENST00000530893 MTMR3Q13615 1198 aa18.58■□□□□ 0.56
BRCA2-204ENST00000530893 DALRD3Q5D0E6 543 aaKnown RBP18.58■□□□□ 0.56
BRCA2-204ENST00000530893 ANO5Q75V66 913 aa18.58■□□□□ 0.56
BRCA2-204ENST00000530893 PALB2Q86YC2 1186 aa18.58■□□□□ 0.56
BRCA2-204ENST00000530893 PLEKHO2Q8TD55 490 aa18.58■□□□□ 0.56
BRCA2-204ENST00000530893 ARL8AQ96BM9 186 aa18.58■□□□□ 0.56
BRCA2-204ENST00000530893 CDHR1Q96JP9 859 aa18.58■□□□□ 0.56
BRCA2-204ENST00000530893 RNPC3Q96LT9 517 aaKnown RBP18.58■□□□□ 0.56
BRCA2-204ENST00000530893 RPS6KC1Q96S38 1066 aa18.58■□□□□ 0.56
BRCA2-204ENST00000530893 RAB17Q9H0T7 212 aa18.58■□□□□ 0.56
BRCA2-204ENST00000530893 GPRC5CQ9NQ84 441 aa18.58■□□□□ 0.56
BRCA2-204ENST00000530893 SYNGAP1Q96PV0 1343 aa18.58■□□□□ 0.56
BRCA2-204ENST00000530893 KRT14P02533 472 aa18.57■□□□□ 0.56
BRCA2-204ENST00000530893 POU5F1Q01860 360 aaKnown RBP18.57■□□□□ 0.56
BRCA2-204ENST00000530893 PTPROQ16827 1216 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms