RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 CASD1Q96PB1 797 aa14□□□□□ -0.17
CCDC90B-216ENST00000529856 NTPCRQ9BSD7 190 aaKnown RBP14□□□□□ -0.17
CCDC90B-216ENST00000529856 TMEM117Q9H0C3 514 aa14□□□□□ -0.17
CCDC90B-216ENST00000529856 PRMT7Q9NVM4 692 aaPredicted RBP14□□□□□ -0.17
CCDC90B-216ENST00000529856 KCNG1Q9UIX4 513 aa14□□□□□ -0.17
CCDC90B-216ENST00000529856 RCOR1Q9UKL0 485 aa14□□□□□ -0.17
CCDC90B-216ENST00000529856 RWDD3Q9Y3V2 267 aa14□□□□□ -0.17
CCDC90B-216ENST00000529856 PCDHB2Q9Y5E7 798 aa14□□□□□ -0.17
CCDC90B-216ENST00000529856 MRPL42Q9Y6G3 142 aaKnown RBP14□□□□□ -0.17
CCDC90B-216ENST00000529856 NPHP3-ACAD11A0A0J9YXS1 232 aa13.99□□□□□ -0.17
CCDC90B-216ENST00000529856 A0A1B0GUA9 196 aa13.99□□□□□ -0.17
CCDC90B-216ENST00000529856 CCDC169A6NNP5 214 aa13.99□□□□□ -0.17
CCDC90B-216ENST00000529856 SFI1A8K8P3 1242 aa13.99□□□□□ -0.17
CCDC90B-216ENST00000529856 C5orf67F2Z3F1 127 aa13.99□□□□□ -0.17
CCDC90B-216ENST00000529856 B4GALT5O43286 388 aa13.99□□□□□ -0.17
CCDC90B-216ENST00000529856 LPXNO60711 386 aa13.99□□□□□ -0.17
CCDC90B-216ENST00000529856 RB1P06400 928 aa13.99□□□□□ -0.17
CCDC90B-216ENST00000529856 IGFBP4P22692 258 aa13.99□□□□□ -0.17
CCDC90B-216ENST00000529856 BMPR1AP36894 532 aa13.99□□□□□ -0.17
CCDC90B-216ENST00000529856 RAD51AP2Q09MP3 1159 aa13.99□□□□□ -0.17
CCDC90B-216ENST00000529856 DHX8Q14562 1220 aaKnown RBP13.99□□□□□ -0.17
CCDC90B-216ENST00000529856 MAPK6Q16659 721 aa13.99□□□□□ -0.17
CCDC90B-216ENST00000529856 CLLU1OSQ5K130 101 aa13.99□□□□□ -0.17
CCDC90B-216ENST00000529856 AXDND1Q5T1B0 1012 aaPredicted RBP13.99□□□□□ -0.17
CCDC90B-216ENST00000529856 RRAGBQ5VZM2 374 aa13.99□□□□□ -0.17
CCDC90B-216ENST00000529856 GPBP1Q86WP2 473 aa13.99□□□□□ -0.17
CCDC90B-216ENST00000529856 LARP4BQ92615 738 aaKnown RBP13.99□□□□□ -0.17
CCDC90B-216ENST00000529856 PGBD4Q96DM1 585 aa13.99□□□□□ -0.17
CCDC90B-216ENST00000529856 KIFC3Q9BVG8 833 aa13.99□□□□□ -0.17
CCDC90B-216ENST00000529856 CCDC113Q9H0I3 377 aa13.99□□□□□ -0.17
CCDC90B-216ENST00000529856 STK17AQ9UEE5 414 aa13.99□□□□□ -0.17
CCDC90B-216ENST00000529856 RALGAPA2Q2PPJ7 1873 aa13.99□□□□□ -0.17
CCDC90B-216ENST00000529856 NLRC5Q86WI3 1866 aa13.99□□□□□ -0.17
CCDC90B-216ENST00000529856 TRANK1O15050 2925 aa13.98□□□□□ -0.17
CCDC90B-216ENST00000529856 H3BNC9 293 aa13.98□□□□□ -0.17
CCDC90B-216ENST00000529856 K7ERI5 159 aa13.98□□□□□ -0.17
CCDC90B-216ENST00000529856 ACKR2O00590 384 aa13.98□□□□□ -0.17
CCDC90B-216ENST00000529856 PRKCBP05771 671 aa13.98□□□□□ -0.17
CCDC90B-216ENST00000529856 PLS3P13797 630 aa13.98□□□□□ -0.17
CCDC90B-216ENST00000529856 NCLP19338 710 aaKnown RBP13.98□□□□□ -0.17
CCDC90B-216ENST00000529856 DMP1Q13316 513 aaPredicted RBP13.98□□□□□ -0.17
CCDC90B-216ENST00000529856 NAALADL2Q58DX5 795 aa13.98□□□□□ -0.17
CCDC90B-216ENST00000529856 CCDC73Q6ZRK6 1079 aa13.98□□□□□ -0.17
CCDC90B-216ENST00000529856 ABI1Q8IZP0 508 aa13.98□□□□□ -0.17
CCDC90B-216ENST00000529856 CNNM3Q8NE01 707 aa13.98□□□□□ -0.17
CCDC90B-216ENST00000529856 GDPD5Q8WTR4 605 aa13.98□□□□□ -0.17
CCDC90B-216ENST00000529856 SPIRE2Q8WWL2 714 aa13.98□□□□□ -0.17
CCDC90B-216ENST00000529856 LPPQ93052 612 aa13.98□□□□□ -0.17
CCDC90B-216ENST00000529856 PLVAPQ9BX97 442 aa13.98□□□□□ -0.17
CCDC90B-216ENST00000529856 EIF2AQ9BY44 585 aaKnown RBP13.98□□□□□ -0.17
CCDC90B-216ENST00000529856 PANK2Q9BZ23 570 aa13.98□□□□□ -0.17
CCDC90B-216ENST00000529856 TMEM134Q9H6X4 195 aa13.98□□□□□ -0.17
CCDC90B-216ENST00000529856 KMT5AQ9NQR1 393 aa13.98□□□□□ -0.17
CCDC90B-216ENST00000529856 TYW1Q9NV66 732 aaKnown RBP13.98□□□□□ -0.17
CCDC90B-216ENST00000529856 LMCD1Q9NZU5 365 aa13.98□□□□□ -0.17
CCDC90B-216ENST00000529856 ARHGAP28Q9P2N2 729 aa13.98□□□□□ -0.17
CCDC90B-216ENST00000529856 ODF2LQ9ULJ1 636 aa13.98□□□□□ -0.17
CCDC90B-216ENST00000529856 PCDHA7Q9UN72 937 aa13.98□□□□□ -0.17
CCDC90B-216ENST00000529856 RBM19Q9Y4C8 960 aaKnown RBP13.98□□□□□ -0.17
CCDC90B-216ENST00000529856 ATP6V1DQ9Y5K8 247 aa13.98□□□□□ -0.17
CCDC90B-216ENST00000529856 MTCH2Q9Y6C9 303 aa13.98□□□□□ -0.17
CCDC90B-216ENST00000529856 MYH11P35749 1972 aa13.98□□□□□ -0.17
CCDC90B-216ENST00000529856 CNTNAP2Q9UHC6 1331 aa13.97□□□□□ -0.17
CCDC90B-216ENST00000529856 A0A087X0B3 334 aa13.97□□□□□ -0.17
CCDC90B-216ENST00000529856 TTLL13PA6NNM8 815 aa13.97□□□□□ -0.17
CCDC90B-216ENST00000529856 MEIS3P2A8K0S8 358 aa13.97□□□□□ -0.17
CCDC90B-216ENST00000529856 OFD1O75665 1012 aa13.97□□□□□ -0.17
CCDC90B-216ENST00000529856 LIG1P18858 919 aa13.97□□□□□ -0.17
CCDC90B-216ENST00000529856 CTNNB1P35222 781 aa13.97□□□□□ -0.17
CCDC90B-216ENST00000529856 GPM6BQ13491 265 aa13.97□□□□□ -0.17
CCDC90B-216ENST00000529856 PRPF4BQ13523 1007 aaKnown RBP13.97□□□□□ -0.17
CCDC90B-216ENST00000529856 GIT2Q14161 759 aa13.97□□□□□ -0.17
CCDC90B-216ENST00000529856 LONRF3Q496Y0 759 aa13.97□□□□□ -0.17
CCDC90B-216ENST00000529856 SLC27A1Q6PCB7 646 aa13.97□□□□□ -0.17
CCDC90B-216ENST00000529856 SHC4Q6S5L8 630 aa13.97□□□□□ -0.17
CCDC90B-216ENST00000529856 AGMOQ6ZNB7 445 aa13.97□□□□□ -0.17
CCDC90B-216ENST00000529856 LRRC55Q6ZSA7 311 aa13.97□□□□□ -0.17
CCDC90B-216ENST00000529856 SMG8Q8ND04 991 aaKnown RBP13.97□□□□□ -0.17
CCDC90B-216ENST00000529856 MAFAQ8NHW3 353 aaPredicted RBP13.97□□□□□ -0.17
CCDC90B-216ENST00000529856 HELQQ8TDG4 1101 aa13.97□□□□□ -0.17
CCDC90B-216ENST00000529856 RSPH1Q8WYR4 309 aa13.97□□□□□ -0.17
CCDC90B-216ENST00000529856 REEP2Q9BRK0 252 aa13.97□□□□□ -0.17
CCDC90B-216ENST00000529856 CWH43Q9H720 699 aa13.97□□□□□ -0.17
CCDC90B-216ENST00000529856 LARSQ9P2J5 1176 aaKnown RBP13.97□□□□□ -0.17
CCDC90B-216ENST00000529856 IPPQ9Y573 584 aa13.97□□□□□ -0.17
CCDC90B-216ENST00000529856 COL6A3P12111 3177 aa13.96□□□□□ -0.17
CCDC90B-216ENST00000529856 PHLPP2Q6ZVD8 1323 aa13.96□□□□□ -0.17
CCDC90B-216ENST00000529856 SLC16A4O15374 487 aa13.96□□□□□ -0.17
CCDC90B-216ENST00000529856 GTPBP6O43824 516 aaPredicted RBP13.96□□□□□ -0.17
CCDC90B-216ENST00000529856 EDN1P05305 212 aa13.96□□□□□ -0.17
CCDC90B-216ENST00000529856 KRT18P05783 430 aaKnown RBP13.96□□□□□ -0.17
CCDC90B-216ENST00000529856 STAT6P42226 847 aa13.96□□□□□ -0.17
CCDC90B-216ENST00000529856 ME1P48163 572 aa13.96□□□□□ -0.17
CCDC90B-216ENST00000529856 ZNF131P52739 623 aa13.96□□□□□ -0.17
CCDC90B-216ENST00000529856 SMTNP53814 917 aa13.96□□□□□ -0.17
CCDC90B-216ENST00000529856 KRT85P78386 507 aa13.96□□□□□ -0.17
CCDC90B-216ENST00000529856 NT5DC1Q5TFE4 455 aa13.96□□□□□ -0.17
CCDC90B-216ENST00000529856 GLB1LQ6UWU2 654 aa13.96□□□□□ -0.17
CCDC90B-216ENST00000529856 SV2BQ7L1I2 683 aa13.96□□□□□ -0.17
CCDC90B-216ENST00000529856 CDR2LQ86X02 465 aaPredicted RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms