RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 EYA4O95677 639 aa17.13■□□□□ 0.33
CCDC90B-215ENST00000529745 SKIV2LQ15477 1246 aaKnown RBP17.13■□□□□ 0.33
CCDC90B-215ENST00000529745 AK8Q96MA6 479 aa17.13■□□□□ 0.33
CCDC90B-215ENST00000529745 BHMT2Q9H2M3 363 aa17.13■□□□□ 0.33
CCDC90B-215ENST00000529745 UBE2ZQ9H832 354 aaPredicted RBP17.13■□□□□ 0.33
CCDC90B-215ENST00000529745 ALG13Q9NP73 1137 aaKnown RBP17.13■□□□□ 0.33
CCDC90B-215ENST00000529745 GPRC5CQ9NQ84 441 aa17.13■□□□□ 0.33
CCDC90B-215ENST00000529745 DDX19AQ9NUU7 478 aaKnown RBP17.13■□□□□ 0.33
CCDC90B-215ENST00000529745 PCDHB2Q9Y5E7 798 aa17.13■□□□□ 0.33
CCDC90B-215ENST00000529745 MYO7AQ13402 2215 aa17.13■□□□□ 0.33
CCDC90B-215ENST00000529745 ZMYM2Q9UBW7 1377 aa17.13■□□□□ 0.33
CCDC90B-215ENST00000529745 INPPL1O15357 1258 aa17.12■□□□□ 0.33
CCDC90B-215ENST00000529745 FGF18O76093 207 aa17.12■□□□□ 0.33
CCDC90B-215ENST00000529745 NCLP19338 710 aaKnown RBP17.12■□□□□ 0.33
CCDC90B-215ENST00000529745 SYT1P21579 422 aa17.12■□□□□ 0.33
CCDC90B-215ENST00000529745 IBSPP21815 317 aaPredicted RBP17.12■□□□□ 0.33
CCDC90B-215ENST00000529745 DNAJB1P25685 340 aa17.12■□□□□ 0.33
CCDC90B-215ENST00000529745 PPM1AP35813 382 aa17.12■□□□□ 0.33
CCDC90B-215ENST00000529745 NAMPTP43490 491 aa17.12■□□□□ 0.33
CCDC90B-215ENST00000529745 CTC1Q2NKJ3 1217 aa17.12■□□□□ 0.33
CCDC90B-215ENST00000529745 TCEAL5Q5H9L2 206 aa17.12■□□□□ 0.33
CCDC90B-215ENST00000529745 PDE12Q6L8Q7 609 aaKnown RBP17.12■□□□□ 0.33
CCDC90B-215ENST00000529745 NOTUMQ6P988 496 aa17.12■□□□□ 0.33
CCDC90B-215ENST00000529745 KCNT2Q6UVM3 1135 aa17.12■□□□□ 0.33
CCDC90B-215ENST00000529745 AGMOQ6ZNB7 445 aa17.12■□□□□ 0.33
CCDC90B-215ENST00000529745 HELQQ8TDG4 1101 aa17.12■□□□□ 0.33
CCDC90B-215ENST00000529745 POF1BQ8WVV4 589 aa17.12■□□□□ 0.33
CCDC90B-215ENST00000529745 KIFAP3Q92845 792 aa17.12■□□□□ 0.33
CCDC90B-215ENST00000529745 PABPC5Q96DU9 382 aaKnown RBP17.12■□□□□ 0.33
CCDC90B-215ENST00000529745 NT5C3AQ9H0P0 336 aa17.12■□□□□ 0.33
CCDC90B-215ENST00000529745 CSRNP2Q9H175 543 aa17.12■□□□□ 0.33
CCDC90B-215ENST00000529745 C2orf40Q9H1Z8 148 aa17.12■□□□□ 0.33
CCDC90B-215ENST00000529745 FZD8Q9H461 694 aa17.12■□□□□ 0.33
CCDC90B-215ENST00000529745 HCSTQ9UBK5 93 aa17.12■□□□□ 0.33
CCDC90B-215ENST00000529745 DNM3Q9UQ16 869 aa17.12■□□□□ 0.33
CCDC90B-215ENST00000529745 MORC2Q9Y6X9 1032 aaPredicted RBP17.12■□□□□ 0.33
CCDC90B-215ENST00000529745 PP2D1A8MPX8 630 aa17.11■□□□□ 0.33
CCDC90B-215ENST00000529745 INO80B-WBP1J3KQ70 363 aa17.11■□□□□ 0.33
CCDC90B-215ENST00000529745 OFD1O75665 1012 aa17.11■□□□□ 0.33
CCDC90B-215ENST00000529745 ARF4P18085 180 aaPredicted RBP17.11■□□□□ 0.33
CCDC90B-215ENST00000529745 NCBP1Q09161 790 aaKnown RBP17.11■□□□□ 0.33
CCDC90B-215ENST00000529745 PPP2R5AQ15172 486 aa17.11■□□□□ 0.33
CCDC90B-215ENST00000529745 SPOUT1Q5T280 376 aaKnown RBP17.11■□□□□ 0.33
CCDC90B-215ENST00000529745 GLB1LQ6UWU2 654 aa17.11■□□□□ 0.33
CCDC90B-215ENST00000529745 RNF169Q8NCN4 708 aa17.11■□□□□ 0.33
CCDC90B-215ENST00000529745 ZNF558Q96NG5 402 aa17.11■□□□□ 0.33
CCDC90B-215ENST00000529745 UBN1Q9NPG3 1134 aa17.11■□□□□ 0.33
CCDC90B-215ENST00000529745 PRMT7Q9NVM4 692 aaPredicted RBP17.11■□□□□ 0.33
CCDC90B-215ENST00000529745 A0A1B0GUA9 196 aa17.1■□□□□ 0.33
CCDC90B-215ENST00000529745 VPS37CA5D8V6 355 aaPredicted RBP17.1■□□□□ 0.33
CCDC90B-215ENST00000529745 LRRIQ4A6NIV6 560 aa17.1■□□□□ 0.33
CCDC90B-215ENST00000529745 MEIS3P2A8K0S8 358 aa17.1■□□□□ 0.33
CCDC90B-215ENST00000529745 E9PMD0 336 aa17.1■□□□□ 0.33
CCDC90B-215ENST00000529745 CDC25AP30304 524 aa17.1■□□□□ 0.33
CCDC90B-215ENST00000529745 RESTQ13127 1097 aa17.1■□□□□ 0.33
CCDC90B-215ENST00000529745 LEXMQ3ZCV2 418 aa17.1■□□□□ 0.33
CCDC90B-215ENST00000529745 NOMO2Q5JPE7 1267 aa17.1■□□□□ 0.33
CCDC90B-215ENST00000529745 ZBTB8OSQ8IWT0 167 aa17.1■□□□□ 0.33
CCDC90B-215ENST00000529745 SLC39A11Q8N1S5 342 aa17.1■□□□□ 0.33
CCDC90B-215ENST00000529745 SMG8Q8ND04 991 aaKnown RBP17.1■□□□□ 0.33
CCDC90B-215ENST00000529745 BSNDQ8WZ55 320 aa17.1■□□□□ 0.33
CCDC90B-215ENST00000529745 MRPS27Q92552 414 aaKnown RBP17.1■□□□□ 0.33
CCDC90B-215ENST00000529745 LPPQ93052 612 aa17.1■□□□□ 0.33
CCDC90B-215ENST00000529745 PNMA5Q96PV4 448 aa17.1■□□□□ 0.33
CCDC90B-215ENST00000529745 TIPINQ9BVW5 301 aa17.1■□□□□ 0.33
CCDC90B-215ENST00000529745 CCDC113Q9H0I3 377 aa17.1■□□□□ 0.33
CCDC90B-215ENST00000529745 RSAD1Q9HA92 442 aa17.1■□□□□ 0.33
CCDC90B-215ENST00000529745 CACNA1AO00555 2505 aa17.1■□□□□ 0.33
CCDC90B-215ENST00000529745 VWA3AA6NCI4 1184 aa17.09■□□□□ 0.33
CCDC90B-215ENST00000529745 PI4K2BG5E9Z4 385 aa17.09■□□□□ 0.33
CCDC90B-215ENST00000529745 FSCN2O14926 492 aa17.09■□□□□ 0.33
CCDC90B-215ENST00000529745 LONP1P36776 959 aaKnown RBP17.09■□□□□ 0.33
CCDC90B-215ENST00000529745 HYAL1Q12794 435 aa17.09■□□□□ 0.33
CCDC90B-215ENST00000529745 TMEM119Q4V9L6 283 aa17.09■□□□□ 0.33
CCDC90B-215ENST00000529745 SLC27A1Q6PCB7 646 aa17.09■□□□□ 0.33
CCDC90B-215ENST00000529745 C1orf186Q6ZWK4 172 aa17.09■□□□□ 0.33
CCDC90B-215ENST00000529745 MAEAQ7L5Y9 396 aa17.09■□□□□ 0.33
CCDC90B-215ENST00000529745 KCNK18Q7Z418 384 aa17.09■□□□□ 0.33
CCDC90B-215ENST00000529745 THNSL1Q8IYQ7 743 aa17.09■□□□□ 0.33
CCDC90B-215ENST00000529745 PPP2R3CQ969Q6 453 aa17.09■□□□□ 0.33
CCDC90B-215ENST00000529745 C17orf75Q9HAS0 396 aa17.09■□□□□ 0.33
CCDC90B-215ENST00000529745 TLR9Q9NR96 1032 aa17.09■□□□□ 0.33
CCDC90B-215ENST00000529745 TBC1D13Q9NVG8 400 aa17.09■□□□□ 0.33
CCDC90B-215ENST00000529745 SPG21Q9NZD8 308 aa17.09■□□□□ 0.33
CCDC90B-215ENST00000529745 KCND2Q9NZV8 630 aa17.09■□□□□ 0.33
CCDC90B-215ENST00000529745 KANSL3Q9P2N6 904 aa17.09■□□□□ 0.33
CCDC90B-215ENST00000529745 IPPQ9Y573 584 aa17.09■□□□□ 0.33
CCDC90B-215ENST00000529745 FSD2A1L4K1 749 aa17.08■□□□□ 0.32
CCDC90B-215ENST00000529745 PDIA4P13667 645 aaKnown RBP17.08■□□□□ 0.32
CCDC90B-215ENST00000529745 GUCY2CP25092 1073 aa17.08■□□□□ 0.32
CCDC90B-215ENST00000529745 IRS1P35568 1242 aa17.08■□□□□ 0.32
CCDC90B-215ENST00000529745 EFNA5P52803 228 aa17.08■□□□□ 0.32
CCDC90B-215ENST00000529745 MAPK7Q13164 816 aa17.08■□□□□ 0.32
CCDC90B-215ENST00000529745 SF3A1Q15459 793 aaKnown RBP17.08■□□□□ 0.32
CCDC90B-215ENST00000529745 RINT1Q6NUQ1 792 aa17.08■□□□□ 0.32
CCDC90B-215ENST00000529745 DAW1Q8N136 415 aa17.08■□□□□ 0.32
CCDC90B-215ENST00000529745 SYT2Q8N9I0 419 aaPredicted RBP17.08■□□□□ 0.32
CCDC90B-215ENST00000529745 CPB2Q96IY4 423 aa17.08■□□□□ 0.32
CCDC90B-215ENST00000529745 IFT74Q96LB3 600 aa17.08■□□□□ 0.32
CCDC90B-215ENST00000529745 EIF2AQ9BY44 585 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms