RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 C2orf40Q9H1Z8 148 aa17.82■□□□□ 0.44
TSPAN4-218ENST00000529566 HCSTQ9UBK5 93 aa17.82■□□□□ 0.44
TSPAN4-218ENST00000529566 DAXXQ9UER7 740 aaPredicted RBP17.82■□□□□ 0.44
TSPAN4-218ENST00000529566 MTCH2Q9Y6C9 303 aa17.82■□□□□ 0.44
TSPAN4-218ENST00000529566 SFI1A8K8P3 1242 aa17.81■□□□□ 0.44
TSPAN4-218ENST00000529566 H3BNC9 293 aa17.81■□□□□ 0.44
TSPAN4-218ENST00000529566 HOXA2O43364 376 aa17.81■□□□□ 0.44
TSPAN4-218ENST00000529566 SKIP12755 728 aa17.81■□□□□ 0.44
TSPAN4-218ENST00000529566 PEX3P56589 373 aa17.81■□□□□ 0.44
TSPAN4-218ENST00000529566 RAD51AP2Q09MP3 1159 aa17.81■□□□□ 0.44
TSPAN4-218ENST00000529566 NOTUMQ6P988 496 aa17.81■□□□□ 0.44
TSPAN4-218ENST00000529566 ZBTB8OSQ8IWT0 167 aa17.81■□□□□ 0.44
TSPAN4-218ENST00000529566 RNF169Q8NCN4 708 aa17.81■□□□□ 0.44
TSPAN4-218ENST00000529566 MAFAQ8NHW3 353 aaPredicted RBP17.81■□□□□ 0.44
TSPAN4-218ENST00000529566 DEPTORQ8TB45 409 aa17.81■□□□□ 0.44
TSPAN4-218ENST00000529566 CCDC51Q96ER9 411 aa17.81■□□□□ 0.44
TSPAN4-218ENST00000529566 PRIMPOLQ96LW4 560 aa17.81■□□□□ 0.44
TSPAN4-218ENST00000529566 CWH43Q9H720 699 aa17.81■□□□□ 0.44
TSPAN4-218ENST00000529566 C17orf75Q9HAS0 396 aa17.81■□□□□ 0.44
TSPAN4-218ENST00000529566 TYW1Q9NV66 732 aaKnown RBP17.81■□□□□ 0.44
TSPAN4-218ENST00000529566 PRMT7Q9NVM4 692 aaPredicted RBP17.81■□□□□ 0.44
TSPAN4-218ENST00000529566 RCOR1Q9UKL0 485 aa17.81■□□□□ 0.44
TSPAN4-218ENST00000529566 RWDD3Q9Y3V2 267 aa17.81■□□□□ 0.44
TSPAN4-218ENST00000529566 PRRC2BQ5JSZ5 2229 aaKnown RBP17.81■□□□□ 0.44
TSPAN4-218ENST00000529566 REV3LO60673 3130 aa17.81■□□□□ 0.44
TSPAN4-218ENST00000529566 CNTNAP2Q9UHC6 1331 aa17.8■□□□□ 0.44
TSPAN4-218ENST00000529566 ACKR2O00590 384 aa17.8■□□□□ 0.44
TSPAN4-218ENST00000529566 RB1P06400 928 aa17.8■□□□□ 0.44
TSPAN4-218ENST00000529566 NCLP19338 710 aaKnown RBP17.8■□□□□ 0.44
TSPAN4-218ENST00000529566 IGFBP4P22692 258 aa17.8■□□□□ 0.44
TSPAN4-218ENST00000529566 EFNA5P52803 228 aa17.8■□□□□ 0.44
TSPAN4-218ENST00000529566 LONRF3Q496Y0 759 aa17.8■□□□□ 0.44
TSPAN4-218ENST00000529566 AGMOQ6ZNB7 445 aa17.8■□□□□ 0.44
TSPAN4-218ENST00000529566 TAS1R3Q7RTX0 852 aa17.8■□□□□ 0.44
TSPAN4-218ENST00000529566 GPBP1Q86WP2 473 aa17.8■□□□□ 0.44
TSPAN4-218ENST00000529566 HELQQ8TDG4 1101 aa17.8■□□□□ 0.44
TSPAN4-218ENST00000529566 SPIRE2Q8WWL2 714 aa17.8■□□□□ 0.44
TSPAN4-218ENST00000529566 LARP4BQ92615 738 aaKnown RBP17.8■□□□□ 0.44
TSPAN4-218ENST00000529566 CHAMP1Q96JM3 812 aa17.8■□□□□ 0.44
TSPAN4-218ENST00000529566 PLVAPQ9BX97 442 aa17.8■□□□□ 0.44
TSPAN4-218ENST00000529566 ARHGAP28Q9P2N2 729 aa17.8■□□□□ 0.44
TSPAN4-218ENST00000529566 USP20Q9Y2K6 914 aa17.8■□□□□ 0.44
TSPAN4-218ENST00000529566 NLRC5Q86WI3 1866 aa17.8■□□□□ 0.44
TSPAN4-218ENST00000529566 CUTAO60888 179 aa17.79■□□□□ 0.44
TSPAN4-218ENST00000529566 OFD1O75665 1012 aa17.79■□□□□ 0.44
TSPAN4-218ENST00000529566 PLS3P13797 630 aa17.79■□□□□ 0.44
TSPAN4-218ENST00000529566 CTNNB1P35222 781 aa17.79■□□□□ 0.44
TSPAN4-218ENST00000529566 CACNB1Q02641 598 aaPredicted RBP17.79■□□□□ 0.44
TSPAN4-218ENST00000529566 NCBP1Q09161 790 aaKnown RBP17.79■□□□□ 0.44
TSPAN4-218ENST00000529566 DMP1Q13316 513 aaPredicted RBP17.79■□□□□ 0.44
TSPAN4-218ENST00000529566 GIT2Q14161 759 aa17.79■□□□□ 0.44
TSPAN4-218ENST00000529566 DHX8Q14562 1220 aaKnown RBP17.79■□□□□ 0.44
TSPAN4-218ENST00000529566 MAPK6Q16659 721 aa17.79■□□□□ 0.44
TSPAN4-218ENST00000529566 NT5DC1Q5TFE4 455 aa17.79■□□□□ 0.44
TSPAN4-218ENST00000529566 RRAGBQ5VZM2 374 aa17.79■□□□□ 0.44
TSPAN4-218ENST00000529566 SHC4Q6S5L8 630 aa17.79■□□□□ 0.44
TSPAN4-218ENST00000529566 RASSF8Q8NHQ8 419 aa17.79■□□□□ 0.44
TSPAN4-218ENST00000529566 KCNG4Q8TDN1 519 aa17.79■□□□□ 0.44
TSPAN4-218ENST00000529566 REEP2Q9BRK0 252 aa17.79■□□□□ 0.44
TSPAN4-218ENST00000529566 PANK2Q9BZ23 570 aa17.79■□□□□ 0.44
TSPAN4-218ENST00000529566 RNF39Q9H2S5 420 aa17.79■□□□□ 0.44
TSPAN4-218ENST00000529566 LMCD1Q9NZU5 365 aa17.79■□□□□ 0.44
TSPAN4-218ENST00000529566 STK17AQ9UEE5 414 aa17.79■□□□□ 0.44
TSPAN4-218ENST00000529566 CCDC39Q9UFE4 941 aa17.79■□□□□ 0.44
TSPAN4-218ENST00000529566 CFAP45Q9UL16 551 aa17.79■□□□□ 0.44
TSPAN4-218ENST00000529566 PCDHA7Q9UN72 937 aa17.79■□□□□ 0.44
TSPAN4-218ENST00000529566 IPPQ9Y573 584 aa17.79■□□□□ 0.44
TSPAN4-218ENST00000529566 RALGAPA2Q2PPJ7 1873 aa17.79■□□□□ 0.44
TSPAN4-218ENST00000529566 COL4A4P53420 1690 aaPredicted RBP17.78■□□□□ 0.44
TSPAN4-218ENST00000529566 CCDC169A6NNP5 214 aa17.78■□□□□ 0.44
TSPAN4-218ENST00000529566 PRKCBP05771 671 aa17.78■□□□□ 0.44
TSPAN4-218ENST00000529566 AFF1P51825 1210 aaKnown RBP17.78■□□□□ 0.44
TSPAN4-218ENST00000529566 ZNF131P52739 623 aa17.78■□□□□ 0.44
TSPAN4-218ENST00000529566 GPM6BQ13491 265 aa17.78■□□□□ 0.44
TSPAN4-218ENST00000529566 PRPF4BQ13523 1007 aaKnown RBP17.78■□□□□ 0.44
TSPAN4-218ENST00000529566 SLC27A1Q6PCB7 646 aa17.78■□□□□ 0.44
TSPAN4-218ENST00000529566 CDR2LQ86X02 465 aaPredicted RBP17.78■□□□□ 0.44
TSPAN4-218ENST00000529566 P2RX5Q93086 422 aa17.78■□□□□ 0.44
TSPAN4-218ENST00000529566 PGBD4Q96DM1 585 aa17.78■□□□□ 0.44
TSPAN4-218ENST00000529566 PDZD7Q9H5P4 517 aa17.78■□□□□ 0.44
TSPAN4-218ENST00000529566 TMEM134Q9H6X4 195 aa17.78■□□□□ 0.44
TSPAN4-218ENST00000529566 KMT5AQ9NQR1 393 aa17.78■□□□□ 0.44
TSPAN4-218ENST00000529566 ODF2LQ9ULJ1 636 aa17.78■□□□□ 0.44
TSPAN4-218ENST00000529566 PLAGL2Q9UPG8 496 aa17.78■□□□□ 0.44
TSPAN4-218ENST00000529566 RBM19Q9Y4C8 960 aaKnown RBP17.78■□□□□ 0.44
TSPAN4-218ENST00000529566 HES2Q9Y543 173 aa17.78■□□□□ 0.44
TSPAN4-218ENST00000529566 KIAA1671Q9BY89 1806 aa17.77■□□□□ 0.44
TSPAN4-218ENST00000529566 K7ERI5 159 aa17.77■□□□□ 0.44
TSPAN4-218ENST00000529566 GRM6O15303 877 aa17.77■□□□□ 0.44
TSPAN4-218ENST00000529566 SLC16A4O15374 487 aa17.77■□□□□ 0.44
TSPAN4-218ENST00000529566 TXLNAP40222 546 aa17.77■□□□□ 0.44
TSPAN4-218ENST00000529566 CAMK1Q14012 370 aa17.77■□□□□ 0.44
TSPAN4-218ENST00000529566 E2F4Q16254 413 aa17.77■□□□□ 0.44
TSPAN4-218ENST00000529566 ABI1Q8IZP0 508 aa17.77■□□□□ 0.44
TSPAN4-218ENST00000529566 LRRC43Q8N309 656 aa17.77■□□□□ 0.44
TSPAN4-218ENST00000529566 KLHL23Q8NBE8 558 aa17.77■□□□□ 0.44
TSPAN4-218ENST00000529566 TMEM161BQ8NDZ6 487 aa17.77■□□□□ 0.44
TSPAN4-218ENST00000529566 CNNM3Q8NE01 707 aa17.77■□□□□ 0.44
TSPAN4-218ENST00000529566 KCNN1Q92952 543 aa17.77■□□□□ 0.44
TSPAN4-218ENST00000529566 C11orf84Q9BUA3 381 aaPredicted RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms