RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 GPD1LQ8N335 351 aa8.65□□□□□ -1.02
CTNND1-220ENST00000529526 ZBED2Q9BTP6 218 aa8.65□□□□□ -1.02
CTNND1-220ENST00000529526 RGL1Q9NZL6 768 aa8.65□□□□□ -1.02
CTNND1-220ENST00000529526 SCOCQ9UIL1 159 aa8.65□□□□□ -1.02
CTNND1-220ENST00000529526 ADGRG1Q9Y653 693 aa8.65□□□□□ -1.02
CTNND1-220ENST00000529526 AFF2P51816 1311 aa8.65□□□□□ -1.02
CTNND1-220ENST00000529526 MYO3BQ8WXR4 1341 aa8.65□□□□□ -1.02
CTNND1-220ENST00000529526 ZNF185O15231 689 aa8.65□□□□□ -1.02
CTNND1-220ENST00000529526 KRT14P02533 472 aa8.65□□□□□ -1.02
CTNND1-220ENST00000529526 ATP2C1P98194 919 aaPredicted RBP8.65□□□□□ -1.02
CTNND1-220ENST00000529526 POU5F1BQ06416 359 aa8.65□□□□□ -1.02
CTNND1-220ENST00000529526 HSP90AA5PQ58FG0 334 aa8.65□□□□□ -1.02
CTNND1-220ENST00000529526 PODNQ7Z5L7 613 aa8.65□□□□□ -1.02
CTNND1-220ENST00000529526 C2orf69Q8N8R5 385 aa8.65□□□□□ -1.02
CTNND1-220ENST00000529526 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.65□□□□□ -1.024e-16■□□□□ 9.4
CTNND1-220ENST00000529526 SLC13A1Q9BZW2 595 aa8.65□□□□□ -1.02
CTNND1-220ENST00000529526 RBAKQ9NYW8 714 aaPredicted RBP8.65□□□□□ -1.02
CTNND1-220ENST00000529526 THEGQ9P2T0 379 aa8.65□□□□□ -1.02
CTNND1-220ENST00000529526 IP6K2Q9UHH9 426 aa8.65□□□□□ -1.02
CTNND1-220ENST00000529526 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.65□□□□□ -1.02
CTNND1-220ENST00000529526 QRICH2Q9H0J4 1663 aa8.65□□□□□ -1.02
CTNND1-220ENST00000529526 NBPF26B4DH59 902 aa8.65□□□□□ -1.02
CTNND1-220ENST00000529526 GYG2O15488 501 aa8.65□□□□□ -1.02
CTNND1-220ENST00000529526 DCTN3O75935 186 aa8.65□□□□□ -1.02
CTNND1-220ENST00000529526 SDC4P31431 198 aa8.65□□□□□ -1.02
CTNND1-220ENST00000529526 PSMC5P62195 406 aa8.65□□□□□ -1.02
CTNND1-220ENST00000529526 TSPY1Q01534 308 aa8.65□□□□□ -1.02
CTNND1-220ENST00000529526 NBPF10Q6P3W6 841 aaKnown RBP8.65□□□□□ -1.02
CTNND1-220ENST00000529526 METTL16Q86W50 562 aaKnown RBP8.65□□□□□ -1.02
CTNND1-220ENST00000529526 NBPF15Q8N660 670 aa8.65□□□□□ -1.02
CTNND1-220ENST00000529526 PRPF38AQ8NAV1 312 aaKnown RBP8.65□□□□□ -1.02
CTNND1-220ENST00000529526 STRIP2Q9ULQ0 834 aa8.65□□□□□ -1.02
CTNND1-220ENST00000529526 LRRC7Q96NW7 1537 aa8.65□□□□□ -1.02
CTNND1-220ENST00000529526 CYP26A1O43174 497 aa8.65□□□□□ -1.03
CTNND1-220ENST00000529526 GNAT1P11488 350 aa8.65□□□□□ -1.03
CTNND1-220ENST00000529526 SFNP31947 248 aa8.65□□□□□ -1.03
CTNND1-220ENST00000529526 COPS2P61201 443 aa8.65□□□□□ -1.03
CTNND1-220ENST00000529526 ROR1Q01973 937 aa8.65□□□□□ -1.03
CTNND1-220ENST00000529526 CACNB2Q08289 660 aaPredicted RBP8.65□□□□□ -1.03
CTNND1-220ENST00000529526 TTLL4Q14679 1199 aa8.65□□□□□ -1.03
CTNND1-220ENST00000529526 ALX1Q15699 326 aa8.65□□□□□ -1.03
CTNND1-220ENST00000529526 PDXDC1Q6P996 788 aa8.65□□□□□ -1.03
CTNND1-220ENST00000529526 CLEC10AQ8IUN9 316 aa8.65□□□□□ -1.03
CTNND1-220ENST00000529526 KCNV2Q8TDN2 545 aa8.65□□□□□ -1.03
CTNND1-220ENST00000529526 ATXN7L3BQ96GX2 97 aa8.65□□□□□ -1.03
CTNND1-220ENST00000529526 VPS39Q96JC1 886 aa8.65□□□□□ -1.03
CTNND1-220ENST00000529526 MRPL4Q9BYD3 311 aaKnown RBP8.65□□□□□ -1.03
CTNND1-220ENST00000529526 DRC3Q9H069 523 aa8.65□□□□□ -1.03
CTNND1-220ENST00000529526 FBXO40Q9UH90 709 aa8.65□□□□□ -1.03
CTNND1-220ENST00000529526 FBXO2Q9UK22 296 aaPredicted RBP8.65□□□□□ -1.03
CTNND1-220ENST00000529526 FGFR4P22455 802 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 TBXAS1P24557 533 aaPredicted RBP8.64□□□□□ -1.03
CTNND1-220ENST00000529526 PAPOLAP51003 745 aaKnown RBP8.64□□□□□ -1.03
CTNND1-220ENST00000529526 ESRRGP62508 458 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 FAM102AQ5T9C2 384 aaPredicted RBP8.64□□□□□ -1.03
CTNND1-220ENST00000529526 KRT39Q6A163 491 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 CCDC137Q6PK04 289 aaKnown RBP8.64□□□□□ -1.03
CTNND1-220ENST00000529526 RNF135Q8IUD6 432 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 MS4A14Q96JA4 679 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 TTC25Q96NG3 672 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 OSBPL5Q9H0X9 879 aaPredicted RBP8.64□□□□□ -1.03
CTNND1-220ENST00000529526 PRDM5Q9NQX1 630 aaPredicted RBP8.64□□□□□ -1.03
CTNND1-220ENST00000529526 APOBEC2Q9Y235 224 aaKnown RBP8.64□□□□□ -1.03
CTNND1-220ENST00000529526 PFDN1O60925 122 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 YWHABP31946 246 aaKnown RBP8.64□□□□□ -1.03
CTNND1-220ENST00000529526 TFDP2Q14188 446 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 NAALADL2Q58DX5 795 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 KIAA1755Q5JYT7 1200 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 KDELC2Q7Z4H8 507 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 CCNYL1Q8N7R7 359 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 TTC13Q8NBP0 860 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 DHX35Q9H5Z1 703 aaKnown RBP8.64□□□□□ -1.03
CTNND1-220ENST00000529526 ADAM21Q9UKJ8 722 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 ALKQ9UM73 1620 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 RFX7Q2KHR2 1363 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 ANO9A1A5B4 782 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 CHRNA5P30532 468 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 KLHL38Q2WGJ6 581 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 RNF219Q5W0B1 726 aaPredicted RBP8.64□□□□□ -1.03
CTNND1-220ENST00000529526 HEATR6Q6AI08 1181 aaKnown RBP8.64□□□□□ -1.03
CTNND1-220ENST00000529526 RGS9BPQ6ZS82 235 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 WDR75Q8IWA0 830 aaKnown RBP8.64□□□□□ -1.03
CTNND1-220ENST00000529526 N4BP2L2Q92802 583 aaPredicted RBP8.64□□□□□ -1.03
CTNND1-220ENST00000529526 ABTB1Q969K4 478 aaPredicted RBP8.64□□□□□ -1.03
CTNND1-220ENST00000529526 SLC9A2Q9UBY0 812 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 BCORL1Q5H9F3 1711 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 A8MXQ7 604 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 DFFAO00273 331 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 KRT38O76015 456 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 ESRRBO95718 433 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 KCNA1Q09470 495 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 MTMR2Q13614 643 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 NCAPHQ15003 741 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 RFX8Q6ZV50 586 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 ZC3H18Q86VM9 953 aaKnown RBP8.64□□□□□ -1.03
CTNND1-220ENST00000529526 LDHDQ86WU2 507 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 TRIM59Q8IWR1 403 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 AGR3Q8TD06 166 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 SNX19Q92543 992 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 KIF12Q96FN5 646 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms