RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 SLC26A6Q9BXS9 759 aa9.62□□□□□ -0.87
SSBP3-212ENST00000528930 ANO3Q9BYT9 981 aa9.62□□□□□ -0.87
SSBP3-212ENST00000528930 GLT8D2Q9H1C3 349 aa9.62□□□□□ -0.87
SSBP3-212ENST00000528930 JADE2Q9NQC1 790 aa9.62□□□□□ -0.87
SSBP3-212ENST00000528930 HDAC6Q9UBN7 1215 aa9.62□□□□□ -0.87
SSBP3-212ENST00000528930 NXF1Q9UBU9 619 aaKnown RBP9.62□□□□□ -0.87
SSBP3-212ENST00000528930 WNT16Q9UBV4 365 aa9.62□□□□□ -0.87
SSBP3-212ENST00000528930 FBXO4Q9UKT5 387 aa9.62□□□□□ -0.87
SSBP3-212ENST00000528930 FBXL21Q9UKT6 434 aa9.62□□□□□ -0.87
SSBP3-212ENST00000528930 USTQ9Y2C2 406 aa9.62□□□□□ -0.87
SSBP3-212ENST00000528930 MYO18BQ8IUG5 2567 aa9.62□□□□□ -0.87
SSBP3-212ENST00000528930 AKAP13Q12802 2813 aa9.61□□□□□ -0.87
SSBP3-212ENST00000528930 TENM4Q6N022 2769 aa9.61□□□□□ -0.87
SSBP3-212ENST00000528930 MAFGO15525 162 aa9.61□□□□□ -0.87
SSBP3-212ENST00000528930 TBC1D4O60343 1298 aa9.61□□□□□ -0.87
SSBP3-212ENST00000528930 LGALS2P05162 132 aa9.61□□□□□ -0.87
SSBP3-212ENST00000528930 SREBF1P36956 1147 aa9.61□□□□□ -0.87
SSBP3-212ENST00000528930 AK2P54819 239 aa9.61□□□□□ -0.87
SSBP3-212ENST00000528930 CHMP4BP1P59074 171 aa9.61□□□□□ -0.87
SSBP3-212ENST00000528930 AKAP17AQ02040 695 aaKnown RBP9.61□□□□□ -0.87
SSBP3-212ENST00000528930 SPEM2Q0P670 501 aa9.61□□□□□ -0.87
SSBP3-212ENST00000528930 SCRN1Q12765 414 aa9.61□□□□□ -0.87
SSBP3-212ENST00000528930 STK3Q13188 491 aa9.61□□□□□ -0.87
SSBP3-212ENST00000528930 JAKMIP3Q5VZ66 844 aa9.61□□□□□ -0.87
SSBP3-212ENST00000528930 ZCCHC14Q8WYQ9 949 aaKnown RBP9.61□□□□□ -0.87
SSBP3-212ENST00000528930 CDHR1Q96JP9 859 aa9.61□□□□□ -0.87
SSBP3-212ENST00000528930 BBC3Q96PG8 261 aaPredicted RBP9.61□□□□□ -0.87
SSBP3-212ENST00000528930 ALG1Q9BT22 464 aa9.61□□□□□ -0.87
SSBP3-212ENST00000528930 KATNAL1Q9BW62 490 aa9.61□□□□□ -0.87
SSBP3-212ENST00000528930 APOL5Q9BWW9 433 aa9.61□□□□□ -0.87
SSBP3-212ENST00000528930 TBC1D17Q9HA65 648 aa9.61□□□□□ -0.87
SSBP3-212ENST00000528930 C6orf50Q9HD87 102 aa9.61□□□□□ -0.87
SSBP3-212ENST00000528930 KCNH7Q9NS40 1196 aa9.61□□□□□ -0.87
SSBP3-212ENST00000528930 GMEB2Q9UKD1 530 aa9.61□□□□□ -0.87
SSBP3-212ENST00000528930 TPCN1Q9ULQ1 816 aa9.61□□□□□ -0.87
SSBP3-212ENST00000528930 GSTTP1A0A1W2PQM5 241 aa9.6□□□□□ -0.87
SSBP3-212ENST00000528930 RSPH10B2B2RC85 870 aa9.6□□□□□ -0.87
SSBP3-212ENST00000528930 H3BRB1 525 aa9.6□□□□□ -0.87
SSBP3-212ENST00000528930 MEIS1O00470 390 aa9.6□□□□□ -0.87
SSBP3-212ENST00000528930 HOXA2O43364 376 aa9.6□□□□□ -0.87
SSBP3-212ENST00000528930 EDIL3O43854 480 aa9.6□□□□□ -0.87
SSBP3-212ENST00000528930 PFKFB2O60825 505 aa9.6□□□□□ -0.87
SSBP3-212ENST00000528930 EIF5BO60841 1220 aaKnown RBP9.6□□□□□ -0.87
SSBP3-212ENST00000528930 DCNP07585 359 aaKnown RBP9.6□□□□□ -0.87
SSBP3-212ENST00000528930 CYP3A4P08684 503 aa9.6□□□□□ -0.87
SSBP3-212ENST00000528930 RSPH10BP0C881 870 aa9.6□□□□□ -0.87
SSBP3-212ENST00000528930 GLULP15104 373 aa9.6□□□□□ -0.87
SSBP3-212ENST00000528930 LORP23490 312 aaPredicted RBP9.6□□□□□ -0.87
SSBP3-212ENST00000528930 GNA11P29992 359 aa9.6□□□□□ -0.87
SSBP3-212ENST00000528930 HOXC8P31273 242 aa9.6□□□□□ -0.87
SSBP3-212ENST00000528930 ARHGAP4P98171 946 aa9.6□□□□□ -0.87
SSBP3-212ENST00000528930 SSRP1Q08945 709 aaKnown RBP9.6□□□□□ -0.87
SSBP3-212ENST00000528930 MTMR1Q13613 665 aa9.6□□□□□ -0.87
SSBP3-212ENST00000528930 BTG3Q14201 252 aaPredicted RBP9.6□□□□□ -0.87
SSBP3-212ENST00000528930 CEP55Q53EZ4 464 aa9.6□□□□□ -0.87
SSBP3-212ENST00000528930 PHLDB3Q6NSJ2 640 aa9.6□□□□□ -0.87
SSBP3-212ENST00000528930 GIMAP8Q8ND71 665 aaPredicted RBP9.6□□□□□ -0.87
SSBP3-212ENST00000528930 CCDC12Q8WUD4 166 aaPredicted RBP9.6□□□□□ -0.87
SSBP3-212ENST00000528930 OSBPL7Q9BZF2 842 aa9.6□□□□□ -0.87
SSBP3-212ENST00000528930 ADAM7Q9H2U9 754 aa9.6□□□□□ -0.87
SSBP3-212ENST00000528930 TUT1Q9H6E5 874 aaKnown RBP9.6□□□□□ -0.87
SSBP3-212ENST00000528930 EHMT1Q9H9B1 1298 aa9.6□□□□□ -0.87
SSBP3-212ENST00000528930 VPS54Q9P1Q0 977 aa9.6□□□□□ -0.87
SSBP3-212ENST00000528930 MRPL42Q9Y6G3 142 aaKnown RBP9.6□□□□□ -0.87
SSBP3-212ENST00000528930 HECTD1Q9ULT8 2610 aa9.6□□□□□ -0.87
SSBP3-212ENST00000528930 MYH15Q9Y2K3 1946 aa9.6□□□□□ -0.87
SSBP3-212ENST00000528930 IGLV3-22A0A075B6J6 115 aa9.59□□□□□ -0.87
SSBP3-212ENST00000528930 FAM86B1E9PN63 330 aa9.59□□□□□ -0.87
SSBP3-212ENST00000528930 NOP56O00567 594 aaKnown RBP9.59□□□□□ -0.87
SSBP3-212ENST00000528930 CPLX1O14810 134 aa9.59□□□□□ -0.87
SSBP3-212ENST00000528930 CAPN5O15484 640 aaPredicted RBP9.59□□□□□ -0.87
SSBP3-212ENST00000528930 DTNBO60941 627 aa9.59□□□□□ -0.87
SSBP3-212ENST00000528930 DEXIO95424 95 aa9.59□□□□□ -0.87
SSBP3-212ENST00000528930 CTDNEP1O95476 244 aa9.59□□□□□ -0.87
SSBP3-212ENST00000528930 FAM86B2P0C5J1 330 aa9.59□□□□□ -0.87
SSBP3-212ENST00000528930 MTHFRP42898 656 aa9.59□□□□□ -0.87
SSBP3-212ENST00000528930 LIMK1P53667 647 aa9.59□□□□□ -0.87
SSBP3-212ENST00000528930 UBE3AQ05086 875 aa9.59□□□□□ -0.87
SSBP3-212ENST00000528930 ITIH3Q06033 890 aa9.59□□□□□ -0.87
SSBP3-212ENST00000528930 NPY5RQ15761 445 aa9.59□□□□□ -0.87
SSBP3-212ENST00000528930 ME3Q16798 604 aa9.59□□□□□ -0.87
SSBP3-212ENST00000528930 SPECC1Q5M775 1068 aa9.59□□□□□ -0.87
SSBP3-212ENST00000528930 PRR23CQ6ZRP0 262 aa9.59□□□□□ -0.87
SSBP3-212ENST00000528930 PDZD3Q86UT5 571 aa9.59□□□□□ -0.87
SSBP3-212ENST00000528930 TRIM22Q8IYM9 498 aa9.59□□□□□ -0.87
SSBP3-212ENST00000528930 REXO1Q8N1G1 1221 aaKnown RBP9.59□□□□□ -0.87
SSBP3-212ENST00000528930 C7orf31Q8N865 590 aa9.59□□□□□ -0.87
SSBP3-212ENST00000528930 EHBP1Q8NDI1 1231 aa9.59□□□□□ -0.87
SSBP3-212ENST00000528930 CCDC148Q8NFR7 591 aa9.59□□□□□ -0.87
SSBP3-212ENST00000528930 APBB2Q92870 758 aa9.59□□□□□ -0.87
SSBP3-212ENST00000528930 AIFM3Q96NN9 605 aa9.59□□□□□ -0.87
SSBP3-212ENST00000528930 RNPEPQ9H4A4 650 aa9.59□□□□□ -0.87
SSBP3-212ENST00000528930 AGO4Q9HCK5 861 aaKnown RBP9.59□□□□□ -0.87
SSBP3-212ENST00000528930 SH3GLB2Q9NR46 395 aa9.59□□□□□ -0.87
SSBP3-212ENST00000528930 CYP26B1Q9NR63 512 aa9.59□□□□□ -0.87
SSBP3-212ENST00000528930 RXFP3Q9NSD7 469 aa9.59□□□□□ -0.87
SSBP3-212ENST00000528930 ZNF462Q96JM2 2506 aa9.59□□□□□ -0.87
SSBP3-212ENST00000528930 TEP1Q99973 2627 aaKnown RBP9.59□□□□□ -0.87
SSBP3-212ENST00000528930 NFASCO94856 1347 aa9.58□□□□□ -0.88
SSBP3-212ENST00000528930 M0R2N6 131 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms