RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 UBLCP1Q8WVY7 318 aaPredicted RBP9.05□□□□□ -0.96
CSTF3-208ENST00000528865 ALG3Q92685 438 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 KAT2BQ92831 832 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 CD101Q93033 1021 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 CNKSR1Q969H4 720 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 ZNF622Q969S3 477 aaKnown RBP eCLIP9.05□□□□□ -0.96
CSTF3-208ENST00000528865 RUNDC3BQ96NL0 473 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 CSRNP1Q96S65 589 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 PCDHB18PQ96TA0 734 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 LXNQ9BS40 222 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 FAM129AQ9BZQ8 928 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 WNT8AQ9H1J5 351 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 VCPKMTQ9H867 229 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 CNOT10Q9H9A5 744 aaKnown RBP9.05□□□□□ -0.96
CSTF3-208ENST00000528865 ERVK-5Q9HDB9 667 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 TAS2R14Q9NYV8 317 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 LARSQ9P2J5 1176 aaKnown RBP9.05□□□□□ -0.96
CSTF3-208ENST00000528865 ZBTB21Q9ULJ3 1066 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 NOVA2Q9UNW9 492 aaKnown RBP9.05□□□□□ -0.96
CSTF3-208ENST00000528865 COQ4Q9Y3A0 265 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 PCDHA3Q9Y5H8 950 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 UBIAD1Q9Y5Z9 338 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 EMSYQ7Z589 1322 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 SCN9AQ15858 1988 aa9.04□□□□□ -0.96
CSTF3-208ENST00000528865 H0YIN7 160 aa9.04□□□□□ -0.96
CSTF3-208ENST00000528865 IPO5O00410 1097 aaKnown RBP9.04□□□□□ -0.96
CSTF3-208ENST00000528865 CHMP2AO43633 222 aa9.04□□□□□ -0.96
CSTF3-208ENST00000528865 FTLP02792 175 aaPredicted RBP9.04□□□□□ -0.96
CSTF3-208ENST00000528865 CYP1A2P05177 515 aa9.04□□□□□ -0.96
CSTF3-208ENST00000528865 MMP10P09238 476 aa9.04□□□□□ -0.96
CSTF3-208ENST00000528865 PLS3P13797 630 aa9.04□□□□□ -0.96
CSTF3-208ENST00000528865 ITGB5P18084 799 aa9.04□□□□□ -0.96
CSTF3-208ENST00000528865 LIG3P49916 1009 aa9.04□□□□□ -0.96
CSTF3-208ENST00000528865 DR1Q01658 176 aa9.04□□□□□ -0.96
CSTF3-208ENST00000528865 ACTN3Q08043 901 aaPredicted RBP9.04□□□□□ -0.96
CSTF3-208ENST00000528865 PTPROQ16827 1216 aa9.04□□□□□ -0.96
CSTF3-208ENST00000528865 ARHGAP44Q17R89 818 aa9.04□□□□□ -0.96
CSTF3-208ENST00000528865 LACTB2Q53H82 288 aaPredicted RBP9.04□□□□□ -0.96
CSTF3-208ENST00000528865 ERMARDQ5T6L9 678 aa9.04□□□□□ -0.96
CSTF3-208ENST00000528865 MEX3CQ5U5Q3 659 aaKnown RBP9.04□□□□□ -0.96
CSTF3-208ENST00000528865 CCDC174Q6PII3 467 aa9.04□□□□□ -0.96
CSTF3-208ENST00000528865 MIER3Q7Z3K6 550 aa9.04□□□□□ -0.96
CSTF3-208ENST00000528865 LDHDQ86WU2 507 aa9.04□□□□□ -0.96
CSTF3-208ENST00000528865 PALB2Q86YC2 1186 aa9.04□□□□□ -0.96
CSTF3-208ENST00000528865 JAMLQ86YT9 394 aa9.04□□□□□ -0.96
CSTF3-208ENST00000528865 ARHGEF19Q8IW93 802 aa9.04□□□□□ -0.96
CSTF3-208ENST00000528865 ZDHHC14Q8IZN3 488 aa9.04□□□□□ -0.96
CSTF3-208ENST00000528865 SYCP3Q8IZU3 236 aa9.04□□□□□ -0.96
CSTF3-208ENST00000528865 SPICE1Q8N0Z3 855 aa9.04□□□□□ -0.96
CSTF3-208ENST00000528865 UBL4BQ8N7F7 174 aa9.04□□□□□ -0.96
CSTF3-208ENST00000528865 PRELID2Q8N945 189 aa9.04□□□□□ -0.96
CSTF3-208ENST00000528865 XXYLT1Q8NBI6 393 aa9.04□□□□□ -0.96
CSTF3-208ENST00000528865 PLEKHO2Q8TD55 490 aa9.04□□□□□ -0.96
CSTF3-208ENST00000528865 RAPGEF5Q92565 580 aa9.04□□□□□ -0.96
CSTF3-208ENST00000528865 HOOK2Q96ED9 719 aa9.04□□□□□ -0.96
CSTF3-208ENST00000528865 CYFIP2Q96F07 1278 aa9.04□□□□□ -0.96
CSTF3-208ENST00000528865 PGM2Q96G03 612 aa9.04□□□□□ -0.96
CSTF3-208ENST00000528865 IWS1Q96ST2 819 aa9.04□□□□□ -0.96
CSTF3-208ENST00000528865 FMO2Q99518 471 aa9.04□□□□□ -0.96
CSTF3-208ENST00000528865 ZSWIM1Q9BR11 485 aa9.04□□□□□ -0.96
CSTF3-208ENST00000528865 DPH5Q9H2P9 285 aa9.04□□□□□ -0.96
CSTF3-208ENST00000528865 PABPC3Q9H361 631 aaKnown RBP9.04□□□□□ -0.96
CSTF3-208ENST00000528865 RABEP2Q9H5N1 569 aa9.04□□□□□ -0.96
CSTF3-208ENST00000528865 AGO4Q9HCK5 861 aaKnown RBP9.04□□□□□ -0.96
CSTF3-208ENST00000528865 UBE2TQ9NPD8 197 aaPredicted RBP9.04□□□□□ -0.96
CSTF3-208ENST00000528865 MAP3K20Q9NYL2 800 aaKnown RBP9.04□□□□□ -0.96
CSTF3-208ENST00000528865 GRHL1Q9NZI5 618 aa9.04□□□□□ -0.96
CSTF3-208ENST00000528865 PARP2Q9UGN5 583 aa9.04□□□□□ -0.96
CSTF3-208ENST00000528865 PGAP2Q9UHJ9 254 aa9.04□□□□□ -0.96
CSTF3-208ENST00000528865 RASAL2Q9UJF2 1139 aa9.04□□□□□ -0.96
CSTF3-208ENST00000528865 COL11A2P13942 1736 aaPredicted RBP9.04□□□□□ -0.96
CSTF3-208ENST00000528865 SYNGAP1Q96PV0 1343 aa9.04□□□□□ -0.96
CSTF3-208ENST00000528865 SPDYE2BA6NHP3 402 aa9.03□□□□□ -0.96
CSTF3-208ENST00000528865 CCDC169A6NNP5 214 aa9.03□□□□□ -0.96
CSTF3-208ENST00000528865 YDJCA8MPS7 323 aa9.03□□□□□ -0.96
CSTF3-208ENST00000528865 E7EVH7 732 aa9.03□□□□□ -0.96
CSTF3-208ENST00000528865 KIAA0754O94854 1291 aa9.03□□□□□ -0.96
CSTF3-208ENST00000528865 ICAM1P05362 532 aa9.03□□□□□ -0.96
CSTF3-208ENST00000528865 SPDYE6P0CI01 402 aa9.03□□□□□ -0.96
CSTF3-208ENST00000528865 ABCB4P21439 1286 aa9.03□□□□□ -0.96
CSTF3-208ENST00000528865 DRD4P21917 467 aa9.03□□□□□ -0.96
CSTF3-208ENST00000528865 HNRNPH1P31943 449 aaKnown RBP9.03□□□□□ -0.96
CSTF3-208ENST00000528865 GTF2H1P32780 548 aa9.03□□□□□ -0.96
CSTF3-208ENST00000528865 RARRES1P49788 294 aa9.03□□□□□ -0.96
CSTF3-208ENST00000528865 PMS2P54278 862 aa9.03□□□□□ -0.96
CSTF3-208ENST00000528865 NCKAP1LP55160 1127 aa9.03□□□□□ -0.96
CSTF3-208ENST00000528865 DLG4P78352 724 aa9.03□□□□□ -0.96
CSTF3-208ENST00000528865 KRT71Q3SY84 523 aa9.03□□□□□ -0.96
CSTF3-208ENST00000528865 ZNF568Q3ZCX4 644 aa9.03□□□□□ -0.96
CSTF3-208ENST00000528865 CYFIP1Q7L576 1253 aa9.03□□□□□ -0.96
CSTF3-208ENST00000528865 TAX1BP1Q86VP1 789 aa9.03□□□□□ -0.96
CSTF3-208ENST00000528865 HOOK3Q86VS8 718 aa9.03□□□□□ -0.96
CSTF3-208ENST00000528865 RPUSD2Q8IZ73 545 aaKnown RBP9.03□□□□□ -0.96
CSTF3-208ENST00000528865 C12orf50Q8NA57 414 aaPredicted RBP9.03□□□□□ -0.96
CSTF3-208ENST00000528865 SLC20A1Q8WUM9 679 aa9.03□□□□□ -0.96
CSTF3-208ENST00000528865 CLEC4DQ8WXI8 215 aa9.03□□□□□ -0.96
CSTF3-208ENST00000528865 P3H4Q92791 437 aa9.03□□□□□ -0.96
CSTF3-208ENST00000528865 SLCO2A1Q92959 643 aa9.03□□□□□ -0.96
CSTF3-208ENST00000528865 RNF25Q96BH1 459 aaPredicted RBP9.03□□□□□ -0.96
CSTF3-208ENST00000528865 HVCN1Q96D96 273 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms