RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 TMEM60Q9H2L4 133 aa12.39□□□□□ -0.43
NR1H3-230ENST00000527949 UPF2Q9HAU5 1272 aaKnown RBP12.39□□□□□ -0.43
NR1H3-230ENST00000527949 XPNPEP1Q9NQW7 623 aa12.39□□□□□ -0.43
NR1H3-230ENST00000527949 DBR1Q9UK59 544 aaKnown RBP12.39□□□□□ -0.43
NR1H3-230ENST00000527949 STK24Q9Y6E0 443 aa12.39□□□□□ -0.43
NR1H3-230ENST00000527949 PLXNA4Q9HCM2 1894 aa12.39□□□□□ -0.43
NR1H3-230ENST00000527949 TECTAO75443 2155 aa12.38□□□□□ -0.43
NR1H3-230ENST00000527949 FSCN2O14926 492 aa12.38□□□□□ -0.43
NR1H3-230ENST00000527949 OR52Z1P0C646 297 aa12.38□□□□□ -0.43
NR1H3-230ENST00000527949 SPATA31C1P0DKV0 1188 aa12.38□□□□□ -0.43
NR1H3-230ENST00000527949 RPA1P27694 616 aa12.38□□□□□ -0.43
NR1H3-230ENST00000527949 NBL1P41271 181 aa12.38□□□□□ -0.43
NR1H3-230ENST00000527949 TXKP42681 527 aa12.38□□□□□ -0.43
NR1H3-230ENST00000527949 RARRES1P49788 294 aa12.38□□□□□ -0.43
NR1H3-230ENST00000527949 VCPP55072 806 aaKnown RBP12.38□□□□□ -0.43
NR1H3-230ENST00000527949 PTENP60484 403 aa12.38□□□□□ -0.43
NR1H3-230ENST00000527949 CYP4A11Q02928 519 aa12.38□□□□□ -0.43
NR1H3-230ENST00000527949 TFDP1Q14186 410 aa12.38□□□□□ -0.43
NR1H3-230ENST00000527949 BMS1Q14692 1282 aaKnown RBP12.38□□□□□ -0.43
NR1H3-230ENST00000527949 TPRNQ4KMQ1 711 aa12.38□□□□□ -0.43
NR1H3-230ENST00000527949 TWF2Q6IBS0 349 aaKnown RBP12.38□□□□□ -0.43
NR1H3-230ENST00000527949 CES5AQ6NT32 575 aa12.38□□□□□ -0.43
NR1H3-230ENST00000527949 KCNT2Q6UVM3 1135 aa12.38□□□□□ -0.43
NR1H3-230ENST00000527949 CNNM3Q8NE01 707 aa12.38□□□□□ -0.43
NR1H3-230ENST00000527949 ERMNQ8TAM6 284 aa12.38□□□□□ -0.43
NR1H3-230ENST00000527949 MRPS27Q92552 414 aaKnown RBP12.38□□□□□ -0.43
NR1H3-230ENST00000527949 PGBD4Q96DM1 585 aa12.38□□□□□ -0.43
NR1H3-230ENST00000527949 NLRP4Q96MN2 994 aa12.38□□□□□ -0.43
NR1H3-230ENST00000527949 ZNF558Q96NG5 402 aa12.38□□□□□ -0.43
NR1H3-230ENST00000527949 FAM105AQ9NUU6 356 aa12.38□□□□□ -0.43
NR1H3-230ENST00000527949 STK39Q9UEW8 545 aa12.38□□□□□ -0.43
NR1H3-230ENST00000527949 NOL7Q9UMY1 257 aaKnown RBP12.38□□□□□ -0.43
NR1H3-230ENST00000527949 SORCS3Q9UPU3 1222 aa12.38□□□□□ -0.43
NR1H3-230ENST00000527949 PIN4Q9Y237 131 aaKnown RBP12.38□□□□□ -0.43
NR1H3-230ENST00000527949 ZMYM2Q9UBW7 1377 aa12.38□□□□□ -0.43
NR1H3-230ENST00000527949 CNTNAP2Q9UHC6 1331 aa12.37□□□□□ -0.43
NR1H3-230ENST00000527949 LAD1O00515 517 aa12.37□□□□□ -0.43
NR1H3-230ENST00000527949 PER2O15055 1255 aa12.37□□□□□ -0.43
NR1H3-230ENST00000527949 INPPL1O15357 1258 aa12.37□□□□□ -0.43
NR1H3-230ENST00000527949 FGFR4P22455 802 aa12.37□□□□□ -0.43
NR1H3-230ENST00000527949 HOXA11P31270 313 aaPredicted RBP12.37□□□□□ -0.43
NR1H3-230ENST00000527949 MCM7P33993 719 aa12.37□□□□□ -0.43
NR1H3-230ENST00000527949 ARL2P36404 184 aa12.37□□□□□ -0.43
NR1H3-230ENST00000527949 FXR2P51116 673 aaKnown RBP eCLIP12.37□□□□□ -0.43
NR1H3-230ENST00000527949 KRT17Q04695 432 aa12.37□□□□□ -0.43
NR1H3-230ENST00000527949 ITIH3Q06033 890 aa12.37□□□□□ -0.43
NR1H3-230ENST00000527949 PDIA5Q14554 519 aa12.37□□□□□ -0.43
NR1H3-230ENST00000527949 TTC38Q5R3I4 469 aa12.37□□□□□ -0.43
NR1H3-230ENST00000527949 ANKRD54Q6NXT1 300 aa12.37□□□□□ -0.43
NR1H3-230ENST00000527949 GLB1LQ6UWU2 654 aa12.37□□□□□ -0.43
NR1H3-230ENST00000527949 LRRC55Q6ZSA7 311 aa12.37□□□□□ -0.43
NR1H3-230ENST00000527949 KSR1Q8IVT5 923 aa12.37□□□□□ -0.43
NR1H3-230ENST00000527949 RNF149Q8NC42 400 aa12.37□□□□□ -0.43
NR1H3-230ENST00000527949 MCPH1Q8NEM0 835 aa12.37□□□□□ -0.43
NR1H3-230ENST00000527949 CASP10Q92851 521 aa12.37□□□□□ -0.43
NR1H3-230ENST00000527949 TMEM143Q96AN5 459 aa12.37□□□□□ -0.43
NR1H3-230ENST00000527949 ZNF668Q96K58 619 aaPredicted RBP12.37□□□□□ -0.43
NR1H3-230ENST00000527949 NACC1Q96RE7 527 aa12.37□□□□□ -0.43
NR1H3-230ENST00000527949 S1PR5Q9H228 398 aa12.37□□□□□ -0.43
NR1H3-230ENST00000527949 FAM86C1Q9NVL1 165 aa12.37□□□□□ -0.43
NR1H3-230ENST00000527949 SPG21Q9NZD8 308 aa12.37□□□□□ -0.43
NR1H3-230ENST00000527949 POTEMA6NI47 508 aa12.36□□□□□ -0.43
NR1H3-230ENST00000527949 H0Y858 1186 aa12.36□□□□□ -0.43
NR1H3-230ENST00000527949 ZBTB39O15060 712 aa12.36□□□□□ -0.43
NR1H3-230ENST00000527949 CSDE1O75534 798 aaKnown RBP12.36□□□□□ -0.43
NR1H3-230ENST00000527949 PRPHP41219 470 aa12.36□□□□□ -0.43
NR1H3-230ENST00000527949 TECP42680 631 aa12.36□□□□□ -0.43
NR1H3-230ENST00000527949 GUCY1B3Q02153 619 aa12.36□□□□□ -0.43
NR1H3-230ENST00000527949 KCNC3Q14003 757 aa12.36□□□□□ -0.43
NR1H3-230ENST00000527949 HAUS3Q68CZ6 603 aa12.36□□□□□ -0.43
NR1H3-230ENST00000527949 CATSPER3Q86XQ3 398 aa12.36□□□□□ -0.43
NR1H3-230ENST00000527949 SLC39A11Q8N1S5 342 aa12.36□□□□□ -0.43
NR1H3-230ENST00000527949 KCTD17Q8N5Z5 321 aa12.36□□□□□ -0.43
NR1H3-230ENST00000527949 C4orf32Q8N8J7 132 aa12.36□□□□□ -0.43
NR1H3-230ENST00000527949 KREMEN2Q8NCW0 462 aa12.36□□□□□ -0.43
NR1H3-230ENST00000527949 MINDY3Q9H8M7 445 aa12.36□□□□□ -0.43
NR1H3-230ENST00000527949 UBN1Q9NPG3 1134 aa12.36□□□□□ -0.43
NR1H3-230ENST00000527949 ENTPD7Q9NQZ7 604 aa12.36□□□□□ -0.43
NR1H3-230ENST00000527949 PRR23AA6NEV1 266 aa12.35□□□□□ -0.43
NR1H3-230ENST00000527949 OFD1O75665 1012 aa12.35□□□□□ -0.43
NR1H3-230ENST00000527949 SRGAP2CP0DJJ0 459 aa12.35□□□□□ -0.43
NR1H3-230ENST00000527949 NCLP19338 710 aaKnown RBP12.35□□□□□ -0.43
NR1H3-230ENST00000527949 FOSBP53539 338 aa12.35□□□□□ -0.43
NR1H3-230ENST00000527949 NCBP1Q09161 790 aaKnown RBP12.35□□□□□ -0.43
NR1H3-230ENST00000527949 GNL2Q13823 731 aaKnown RBP12.35□□□□□ -0.43
NR1H3-230ENST00000527949 ZNF174Q15697 407 aa12.35□□□□□ -0.43
NR1H3-230ENST00000527949 NOMO2Q5JPE7 1267 aa12.35□□□□□ -0.43
NR1H3-230ENST00000527949 UBXN11Q5T124 520 aa12.35□□□□□ -0.43
NR1H3-230ENST00000527949 PPP4R3CPQ6ZMV5 832 aa12.35□□□□□ -0.43
NR1H3-230ENST00000527949 PLCD3Q8N3E9 789 aa12.35□□□□□ -0.43
NR1H3-230ENST00000527949 IGSF22Q8N9C0 903 aa12.35□□□□□ -0.43
NR1H3-230ENST00000527949 VN1R2Q8NFZ6 395 aa12.35□□□□□ -0.43
NR1H3-230ENST00000527949 HELQQ8TDG4 1101 aa12.35□□□□□ -0.43
NR1H3-230ENST00000527949 NKD2Q969F2 451 aaPredicted RBP12.35□□□□□ -0.43
NR1H3-230ENST00000527949 TMX3Q96JJ7 454 aa12.35□□□□□ -0.43
NR1H3-230ENST00000527949 PRIMPOLQ96LW4 560 aa12.35□□□□□ -0.43
NR1H3-230ENST00000527949 CCDC43Q96MW1 224 aaKnown RBP12.35□□□□□ -0.43
NR1H3-230ENST00000527949 TBC1D32Q96NH3 1257 aa12.35□□□□□ -0.43
NR1H3-230ENST00000527949 TCF25Q9BQ70 676 aa12.35□□□□□ -0.43
NR1H3-230ENST00000527949 RAB34Q9BZG1 259 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms