RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 NFAT5O94916 1531 aa13.39□□□□□ -0.27
TSKU-203ENST00000527881 NPHP3-ACAD11A0A0J9YXS1 232 aa13.38□□□□□ -0.27
TSKU-203ENST00000527881 CCDC160A6NGH7 325 aa13.38□□□□□ -0.27
TSKU-203ENST00000527881 BAG2O95816 211 aa13.38□□□□□ -0.27
TSKU-203ENST00000527881 FAM200BP0CF97 657 aa13.38□□□□□ -0.27
TSKU-203ENST00000527881 SEPT7Q16181 437 aaKnown RBP13.38□□□□□ -0.27
TSKU-203ENST00000527881 KCNK18Q7Z418 384 aa13.38□□□□□ -0.27
TSKU-203ENST00000527881 NCAPG2Q86XI2 1143 aa13.38□□□□□ -0.27
TSKU-203ENST00000527881 INPP5DQ92835 1189 aa13.38□□□□□ -0.27
TSKU-203ENST00000527881 CCDC77Q9BR77 488 aa13.38□□□□□ -0.27
TSKU-203ENST00000527881 FGFBP2Q9BYJ0 223 aa13.38□□□□□ -0.27
TSKU-203ENST00000527881 ADAM33Q9BZ11 813 aa13.38□□□□□ -0.27
TSKU-203ENST00000527881 ZWILCHQ9H900 591 aa13.38□□□□□ -0.27
TSKU-203ENST00000527881 SEC63Q9UGP8 760 aaKnown RBP13.38□□□□□ -0.27
TSKU-203ENST00000527881 CHORDC1Q9UHD1 332 aaPredicted RBP13.38□□□□□ -0.27
TSKU-203ENST00000527881 ANKRD63C9JTQ0 380 aa13.38□□□□□ -0.27
TSKU-203ENST00000527881 GYG2O15488 501 aa13.38□□□□□ -0.27
TSKU-203ENST00000527881 TOM1O60784 492 aa13.38□□□□□ -0.27
TSKU-203ENST00000527881 TAC1P20366 129 aa13.38□□□□□ -0.27
TSKU-203ENST00000527881 TNFAIP3P21580 790 aa13.38□□□□□ -0.27
TSKU-203ENST00000527881 FOXN2P32314 431 aa13.38□□□□□ -0.27
TSKU-203ENST00000527881 PDIA5Q14554 519 aa13.38□□□□□ -0.27
TSKU-203ENST00000527881 RRP1BQ14684 758 aaKnown RBP13.38□□□□□ -0.27
TSKU-203ENST00000527881 MESDQ14696 234 aa13.38□□□□□ -0.27
TSKU-203ENST00000527881 KPNB1Q14974 876 aaKnown RBP13.38□□□□□ -0.27
TSKU-203ENST00000527881 RBM26Q5T8P6 1007 aaKnown RBP13.38□□□□□ -0.27
TSKU-203ENST00000527881 MFSD5Q6N075 450 aa13.38□□□□□ -0.27
TSKU-203ENST00000527881 ANKLE1Q8NAG6 615 aa13.38□□□□□ -0.27
TSKU-203ENST00000527881 RBM46Q8TBY0 533 aaKnown RBP13.38□□□□□ -0.27
TSKU-203ENST00000527881 NUDT12Q9BQG2 462 aa13.38□□□□□ -0.27
TSKU-203ENST00000527881 CENPKQ9BS16 269 aa13.38□□□□□ -0.27
TSKU-203ENST00000527881 MKNK2Q9HBH9 465 aa13.38□□□□□ -0.27
TSKU-203ENST00000527881 SUGT1Q9Y2Z0 365 aa13.38□□□□□ -0.27
TSKU-203ENST00000527881 MAP7Q14244 749 aa13.38□□□□□ -0.27
TSKU-203ENST00000527881 COBLL1Q53SF7 1204 aa13.38□□□□□ -0.27
TSKU-203ENST00000527881 CYP4F22Q6NT55 531 aa13.38□□□□□ -0.27
TSKU-203ENST00000527881 DSTYKQ6XUX3 929 aa13.38□□□□□ -0.27
TSKU-203ENST00000527881 SLFN11Q7Z7L1 901 aa13.38□□□□□ -0.27
TSKU-203ENST00000527881 SDCCAG8Q86SQ7 713 aaPredicted RBP13.38□□□□□ -0.27
TSKU-203ENST00000527881 LCA5Q86VQ0 697 aa13.38□□□□□ -0.27
TSKU-203ENST00000527881 ENDOVQ8N8Q3 282 aaKnown RBP13.38□□□□□ -0.27
TSKU-203ENST00000527881 PNMA5Q96PV4 448 aa13.38□□□□□ -0.27
TSKU-203ENST00000527881 PLEKHG4BQ96PX9 1271 aa13.38□□□□□ -0.27
TSKU-203ENST00000527881 CYTH2Q99418 400 aa13.38□□□□□ -0.27
TSKU-203ENST00000527881 POP1Q99575 1024 aaKnown RBP13.38□□□□□ -0.27
TSKU-203ENST00000527881 UBN1Q9NPG3 1134 aa13.38□□□□□ -0.27
TSKU-203ENST00000527881 EMILIN3Q9NT22 766 aa13.38□□□□□ -0.27
TSKU-203ENST00000527881 CFAP69A5D8W1 941 aa13.37□□□□□ -0.27
TSKU-203ENST00000527881 CCNFP41002 786 aa13.37□□□□□ -0.27
TSKU-203ENST00000527881 CNPY1Q3B7I2 92 aa13.37□□□□□ -0.27
TSKU-203ENST00000527881 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.37□□□□□ -0.27
TSKU-203ENST00000527881 OLFML2BQ68BL8 750 aa13.37□□□□□ -0.27
TSKU-203ENST00000527881 TRMT10CQ7L0Y3 403 aaKnown RBP13.37□□□□□ -0.27
TSKU-203ENST00000527881 NLRP10Q86W26 655 aa13.37□□□□□ -0.27
TSKU-203ENST00000527881 OSCARQ8IYS5 282 aa13.37□□□□□ -0.27
TSKU-203ENST00000527881 ANKRD35Q8N283 1001 aa13.37□□□□□ -0.27
TSKU-203ENST00000527881 ARHGAP18Q8N392 663 aa13.37□□□□□ -0.27
TSKU-203ENST00000527881 PRELID2Q8N945 189 aa13.37□□□□□ -0.27
TSKU-203ENST00000527881 CHMP2BQ9UQN3 213 aa13.37□□□□□ -0.27
TSKU-203ENST00000527881 DIS3Q9Y2L1 958 aaKnown RBP13.37□□□□□ -0.27
TSKU-203ENST00000527881 PCDHB13Q9Y5F0 798 aa13.37□□□□□ -0.27
TSKU-203ENST00000527881 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.37□□□□□ -0.27
TSKU-203ENST00000527881 HNRNPRO43390 633 aaKnown RBP13.37□□□□□ -0.27
TSKU-203ENST00000527881 PDE8AO60658 829 aa13.37□□□□□ -0.27
TSKU-203ENST00000527881 TTLL1O95922 423 aa13.37□□□□□ -0.27
TSKU-203ENST00000527881 KRT15P19012 456 aa13.37□□□□□ -0.27
TSKU-203ENST00000527881 PON1P27169 355 aa13.37□□□□□ -0.27
TSKU-203ENST00000527881 GNA11P29992 359 aa13.37□□□□□ -0.27
TSKU-203ENST00000527881 MYBPC3Q14896 1274 aa13.37□□□□□ -0.27
TSKU-203ENST00000527881 ARHGAP44Q17R89 818 aa13.37□□□□□ -0.27
TSKU-203ENST00000527881 CAPN12Q6ZSI9 719 aa13.37□□□□□ -0.27
TSKU-203ENST00000527881 TMEM109Q9BVC6 243 aa13.37□□□□□ -0.27
TSKU-203ENST00000527881 PLA2G12BQ9BX93 195 aa13.37□□□□□ -0.27
TSKU-203ENST00000527881 FAM192AQ9GZU8 254 aa13.37□□□□□ -0.27
TSKU-203ENST00000527881 NPHS2Q9NP85 383 aa13.37□□□□□ -0.27
TSKU-203ENST00000527881 TMEM260Q9NX78 707 aa13.37□□□□□ -0.27
TSKU-203ENST00000527881 BARHL2Q9NY43 387 aa13.37□□□□□ -0.27
TSKU-203ENST00000527881 ASAP1Q9ULH1 1129 aa13.37□□□□□ -0.27
TSKU-203ENST00000527881 SYNGAP1Q96PV0 1343 aa13.37□□□□□ -0.27
TSKU-203ENST00000527881 WDR91A4D1P6 747 aa13.37□□□□□ -0.27
TSKU-203ENST00000527881 DDX3YO15523 660 aaKnown RBP13.37□□□□□ -0.27
TSKU-203ENST00000527881 ZSCAN9O15535 394 aaPredicted RBP13.37□□□□□ -0.27
TSKU-203ENST00000527881 SPOPO43791 374 aa13.37□□□□□ -0.27
TSKU-203ENST00000527881 PTPN4P29074 926 aa13.37□□□□□ -0.27
TSKU-203ENST00000527881 TNNI2P48788 182 aa13.37□□□□□ -0.27
TSKU-203ENST00000527881 MARCKSL1P49006 195 aa13.37□□□□□ -0.27
TSKU-203ENST00000527881 DRG2P55039 364 aaKnown RBP13.37□□□□□ -0.27
TSKU-203ENST00000527881 USP46P62068 366 aa13.37□□□□□ -0.27
TSKU-203ENST00000527881 CCDC15Q0P6D6 951 aa13.37□□□□□ -0.27
TSKU-203ENST00000527881 TTC27Q6P3X3 843 aa13.37□□□□□ -0.27
TSKU-203ENST00000527881 REXO1Q8N1G1 1221 aaKnown RBP13.37□□□□□ -0.27
TSKU-203ENST00000527881 GJA10Q969M2 543 aa13.37□□□□□ -0.27
TSKU-203ENST00000527881 MCM9Q9NXL9 1143 aa13.37□□□□□ -0.27
TSKU-203ENST00000527881 USP20Q9Y2K6 914 aa13.37□□□□□ -0.27
TSKU-203ENST00000527881 PARP4Q9UKK3 1724 aaKnown RBP13.36□□□□□ -0.27
TSKU-203ENST00000527881 GYG1P46976 350 aa13.36□□□□□ -0.27
TSKU-203ENST00000527881 SLC34A1Q06495 639 aa13.36□□□□□ -0.27
TSKU-203ENST00000527881 FYB2Q5VWT5 728 aa13.36□□□□□ -0.27
TSKU-203ENST00000527881 GALNT17Q6IS24 598 aa13.36□□□□□ -0.27
TSKU-203ENST00000527881 PHLDB3Q6NSJ2 640 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms