RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 KCTD19Q17RG1 926 aaPredicted RBP19.03■□□□□ 0.64
USH1C-205ENST00000527020 ATG4CQ96DT6 458 aa19.03■□□□□ 0.64
USH1C-205ENST00000527020 SEPT11Q9NVA2 429 aaKnown RBP19.03■□□□□ 0.64
USH1C-205ENST00000527020 USP20Q9Y2K6 914 aa19.03■□□□□ 0.64
USH1C-205ENST00000527020 PHIPQ8WWQ0 1821 aa19.02■□□□□ 0.64
USH1C-205ENST00000527020 GOLGA8IPA6NC78 632 aa19.02■□□□□ 0.64
USH1C-205ENST00000527020 GOLGA8JA6NMD2 632 aa19.02■□□□□ 0.64
USH1C-205ENST00000527020 WDR64B1ANS9 1081 aa19.02■□□□□ 0.64
USH1C-205ENST00000527020 ANKRD63C9JTQ0 380 aa19.02■□□□□ 0.64
USH1C-205ENST00000527020 KRT14P02533 472 aa19.02■□□□□ 0.64
USH1C-205ENST00000527020 HSPA9P38646 679 aaKnown RBP19.02■□□□□ 0.64
USH1C-205ENST00000527020 XKR9Q5GH70 373 aa19.02■□□□□ 0.64
USH1C-205ENST00000527020 NSMFQ6X4W1 530 aa19.02■□□□□ 0.64
USH1C-205ENST00000527020 ANO5Q75V66 913 aa19.02■□□□□ 0.64
USH1C-205ENST00000527020 DDX42Q86XP3 938 aaKnown RBP eCLIP19.02■□□□□ 0.64
USH1C-205ENST00000527020 TMEM161BQ8NDZ6 487 aa19.02■□□□□ 0.64
USH1C-205ENST00000527020 ANKEF1Q9NU02 776 aa19.02■□□□□ 0.64
USH1C-205ENST00000527020 PIM2Q9P1W9 311 aa19.02■□□□□ 0.64
USH1C-205ENST00000527020 PMM2O15305 246 aa19.02■□□□□ 0.63
USH1C-205ENST00000527020 ZBED4O75132 1171 aa19.02■□□□□ 0.63
USH1C-205ENST00000527020 IVLP07476 585 aa19.02■□□□□ 0.63
USH1C-205ENST00000527020 SFNP31947 248 aa19.02■□□□□ 0.63
USH1C-205ENST00000527020 SNRPFP62306 86 aaKnown RBP19.02■□□□□ 0.63
USH1C-205ENST00000527020 KRT76Q01546 638 aa19.02■□□□□ 0.63
USH1C-205ENST00000527020 CFAP58Q5T655 872 aa19.02■□□□□ 0.63
USH1C-205ENST00000527020 FAM102BQ5T8I3 360 aa19.02■□□□□ 0.63
USH1C-205ENST00000527020 POTEAQ6S8J7 498 aa19.02■□□□□ 0.63
USH1C-205ENST00000527020 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.02■□□□□ 0.63
USH1C-205ENST00000527020 RUFY1Q96T51 708 aa19.02■□□□□ 0.63
USH1C-205ENST00000527020 KIFC3Q9BVG8 833 aa19.02■□□□□ 0.63
USH1C-205ENST00000527020 NEUROG2Q9H2A3 272 aa19.02■□□□□ 0.63
USH1C-205ENST00000527020 TAOK3Q9H2K8 898 aa19.02■□□□□ 0.63
USH1C-205ENST00000527020 NR2E1Q9Y466 385 aa19.02■□□□□ 0.63
USH1C-205ENST00000527020 TESPA1A2RU30 521 aaPredicted RBP19.01■□□□□ 0.63
USH1C-205ENST00000527020 POU5F1Q01860 360 aaKnown RBP19.01■□□□□ 0.63
USH1C-205ENST00000527020 CETN1Q12798 172 aa19.01■□□□□ 0.63
USH1C-205ENST00000527020 BAATQ14032 418 aaPredicted RBP19.01■□□□□ 0.63
USH1C-205ENST00000527020 ARHGEF16Q5VV41 709 aa19.01■□□□□ 0.63
USH1C-205ENST00000527020 CBWD2Q8IUF1 395 aa19.01■□□□□ 0.63
USH1C-205ENST00000527020 CD302Q8IX05 232 aa19.01■□□□□ 0.63
USH1C-205ENST00000527020 JDP2Q8WYK2 163 aa19.01■□□□□ 0.63
USH1C-205ENST00000527020 CWC15Q9P013 229 aaKnown RBP19.01■□□□□ 0.63
USH1C-205ENST00000527020 AMACRQ9UHK6 382 aa19.01■□□□□ 0.63
USH1C-205ENST00000527020 TBX20Q9UMR3 447 aa19.01■□□□□ 0.63
USH1C-205ENST00000527020 NFKBIEO00221 500 aa19■□□□□ 0.63
USH1C-205ENST00000527020 CHRNB2P17787 502 aa19■□□□□ 0.63
USH1C-205ENST00000527020 NPTX2P47972 431 aa19■□□□□ 0.63
USH1C-205ENST00000527020 MXI1P50539 228 aa19■□□□□ 0.63
USH1C-205ENST00000527020 HADHBP55084 474 aaKnown RBP19■□□□□ 0.63
USH1C-205ENST00000527020 CUL1Q13616 776 aa19■□□□□ 0.63
USH1C-205ENST00000527020 NBPF12Q5TAG4 269 aaPredicted RBP19■□□□□ 0.63
USH1C-205ENST00000527020 SAMD7Q7Z3H4 446 aa19■□□□□ 0.63
USH1C-205ENST00000527020 DEFB132Q7Z7B7 95 aa19■□□□□ 0.63
USH1C-205ENST00000527020 VSIG10LQ86VR7 867 aa19■□□□□ 0.63
USH1C-205ENST00000527020 REPS2Q8NFH8 660 aa19■□□□□ 0.63
USH1C-205ENST00000527020 BSNDQ8WZ55 320 aa19■□□□□ 0.63
USH1C-205ENST00000527020 SEMA4DQ92854 862 aa19■□□□□ 0.63
USH1C-205ENST00000527020 VTI1AQ96AJ9 217 aa19■□□□□ 0.63
USH1C-205ENST00000527020 KREMEN1Q96MU8 473 aa19■□□□□ 0.63
USH1C-205ENST00000527020 SLITRK6Q9H5Y7 841 aa19■□□□□ 0.63
USH1C-205ENST00000527020 RNF146Q9NTX7 359 aa19■□□□□ 0.63
USH1C-205ENST00000527020 TULP2O00295 520 aa19■□□□□ 0.63
USH1C-205ENST00000527020 STBD1O95210 358 aa19■□□□□ 0.63
USH1C-205ENST00000527020 SGPL1O95470 568 aa19■□□□□ 0.63
USH1C-205ENST00000527020 FGGP02679 453 aa19■□□□□ 0.63
USH1C-205ENST00000527020 RPUSD2Q8IZ73 545 aaKnown RBP19■□□□□ 0.63
USH1C-205ENST00000527020 IWS1Q96ST2 819 aa19■□□□□ 0.63
USH1C-205ENST00000527020 PCDHB18PQ96TA0 734 aa19■□□□□ 0.63
USH1C-205ENST00000527020 HACL1Q9UJ83 578 aa19■□□□□ 0.63
USH1C-205ENST00000527020 NOCTQ9UK39 431 aaKnown RBP19■□□□□ 0.63
USH1C-205ENST00000527020 ZNF862O60290 1169 aa18.99■□□□□ 0.63
USH1C-205ENST00000527020 FTLP02792 175 aaPredicted RBP18.99■□□□□ 0.63
USH1C-205ENST00000527020 IRAK1P51617 712 aa18.99■□□□□ 0.63
USH1C-205ENST00000527020 TCEAL1Q15170 157 aa18.99■□□□□ 0.63
USH1C-205ENST00000527020 SNRNP35Q16560 246 aaKnown RBP18.99■□□□□ 0.63
USH1C-205ENST00000527020 SLC39A4Q6P5W5 647 aa18.99■□□□□ 0.63
USH1C-205ENST00000527020 NOP9Q86U38 636 aaKnown RBP18.99■□□□□ 0.63
USH1C-205ENST00000527020 MAP4K3Q8IVH8 894 aa18.99■□□□□ 0.63
USH1C-205ENST00000527020 FAM71AQ8IYT1 594 aa18.99■□□□□ 0.63
USH1C-205ENST00000527020 SH2D3CQ8N5H7 860 aa18.99■□□□□ 0.63
USH1C-205ENST00000527020 EPS8L1Q8TE68 723 aa18.99■□□□□ 0.63
USH1C-205ENST00000527020 SEC14L1Q92503 715 aa18.99■□□□□ 0.63
USH1C-205ENST00000527020 ALG3Q92685 438 aa18.99■□□□□ 0.63
USH1C-205ENST00000527020 SAAL1Q96ER3 474 aa18.99■□□□□ 0.63
USH1C-205ENST00000527020 MOV10L1Q9BXT6 1211 aaKnown RBP18.99■□□□□ 0.63
USH1C-205ENST00000527020 CARD9Q9H257 536 aa18.99■□□□□ 0.63
USH1C-205ENST00000527020 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.99■□□□□ 0.63
USH1C-205ENST00000527020 TELO2Q9Y4R8 837 aa18.99■□□□□ 0.63
USH1C-205ENST00000527020 CTDP1Q9Y5B0 961 aaPredicted RBP18.99■□□□□ 0.63
USH1C-205ENST00000527020 GRIN2DO15399 1336 aa18.99■□□□□ 0.63
USH1C-205ENST00000527020 LCTP09848 1927 aa18.99■□□□□ 0.63
USH1C-205ENST00000527020 CCDC169A6NNP5 214 aa18.99■□□□□ 0.63
USH1C-205ENST00000527020 TTI1O43156 1089 aa18.99■□□□□ 0.63
USH1C-205ENST00000527020 SOX10P56693 466 aa18.99■□□□□ 0.63
USH1C-205ENST00000527020 MAP2K1Q02750 393 aaPredicted RBP18.99■□□□□ 0.63
USH1C-205ENST00000527020 HLTFQ14527 1009 aaKnown RBP eCLIP18.99■□□□□ 0.63
USH1C-205ENST00000527020 ZNF746Q6NUN9 644 aaPredicted RBP18.99■□□□□ 0.63
USH1C-205ENST00000527020 SENP7Q9BQF6 1050 aa18.99■□□□□ 0.63
USH1C-205ENST00000527020 CELF4Q9BZC1 486 aaKnown RBP18.99■□□□□ 0.63
USH1C-205ENST00000527020 LCMT1Q9UIC8 334 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms