RNA–Protein interactions for RNA: ENST00000526150.1

COLCA1-202, Transcript of colorectal cancer associated 1, humanhuman

TSL 2

Gene COLCA1, Length 391 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-202ENST00000526150 LONRF3Q496Y0 759 aa13.62□□□□□ -0.23
COLCA1-202ENST00000526150 OTOP3Q7RTS5 596 aa13.62□□□□□ -0.23
COLCA1-202ENST00000526150 MRPL10Q7Z7H8 261 aaKnown RBP13.62□□□□□ -0.23
COLCA1-202ENST00000526150 HACE1Q8IYU2 909 aa13.62□□□□□ -0.23
COLCA1-202ENST00000526150 PRPF31Q8WWY3 499 aaKnown RBP13.62□□□□□ -0.23
COLCA1-202ENST00000526150 WASF1Q92558 559 aa13.62□□□□□ -0.23
COLCA1-202ENST00000526150 SH2D3AQ9BRG2 576 aa13.62□□□□□ -0.23
COLCA1-202ENST00000526150 MFSD1Q9H3U5 465 aa13.62□□□□□ -0.23
COLCA1-202ENST00000526150 DHX33Q9H6R0 707 aaKnown RBP13.62□□□□□ -0.23
COLCA1-202ENST00000526150 IFT122Q9HBG6 1241 aa13.62□□□□□ -0.23
COLCA1-202ENST00000526150 KCNMB3Q9NPA1 279 aa13.62□□□□□ -0.23
COLCA1-202ENST00000526150 MRPL17Q9NRX2 175 aaKnown RBP13.62□□□□□ -0.23
COLCA1-202ENST00000526150 PDRG1Q9NUG6 133 aa13.62□□□□□ -0.23
COLCA1-202ENST00000526150 KMT2EQ8IZD2 1858 aa13.61□□□□□ -0.23
COLCA1-202ENST00000526150 TMEM150BA6NC51 233 aa13.61□□□□□ -0.23
COLCA1-202ENST00000526150 CCNT1O60563 726 aaKnown RBP13.61□□□□□ -0.23
COLCA1-202ENST00000526150 SRGAP2CP0DJJ0 459 aa13.61□□□□□ -0.23
COLCA1-202ENST00000526150 EPCAMP16422 314 aa13.61□□□□□ -0.23
COLCA1-202ENST00000526150 YWHABP31946 246 aaKnown RBP13.61□□□□□ -0.23
COLCA1-202ENST00000526150 SLC11A1P49279 550 aa13.61□□□□□ -0.23
COLCA1-202ENST00000526150 VCPP55072 806 aaKnown RBP13.61□□□□□ -0.23
COLCA1-202ENST00000526150 TFDP1Q14186 410 aa13.61□□□□□ -0.23
COLCA1-202ENST00000526150 PLA2G4FQ68DD2 849 aa13.61□□□□□ -0.23
COLCA1-202ENST00000526150 CYP26C1Q6V0L0 522 aa13.61□□□□□ -0.23
COLCA1-202ENST00000526150 C15orf39Q6ZRI6 1047 aa13.61□□□□□ -0.23
COLCA1-202ENST00000526150 CCDC149Q6ZUS6 474 aa13.61□□□□□ -0.23
COLCA1-202ENST00000526150 KSR1Q8IVT5 923 aa13.61□□□□□ -0.23
COLCA1-202ENST00000526150 SLC22A17Q8WUG5 538 aa13.61□□□□□ -0.23
COLCA1-202ENST00000526150 CCDC51Q96ER9 411 aa13.61□□□□□ -0.23
COLCA1-202ENST00000526150 PHF20Q9BVI0 1012 aa13.61□□□□□ -0.23
COLCA1-202ENST00000526150 ZSWIM4Q9H7M6 989 aa13.61□□□□□ -0.23
COLCA1-202ENST00000526150 BRMS1Q9HCU9 246 aa13.61□□□□□ -0.23
COLCA1-202ENST00000526150 STK36Q9NRP7 1315 aa13.61□□□□□ -0.23
COLCA1-202ENST00000526150 EML1O00423 815 aa13.6□□□□□ -0.23
COLCA1-202ENST00000526150 GALR2O43603 387 aaPredicted RBP13.6□□□□□ -0.23
COLCA1-202ENST00000526150 SLC37A4O43826 429 aa13.6□□□□□ -0.23
COLCA1-202ENST00000526150 BRD1O95696 1058 aa13.6□□□□□ -0.23
COLCA1-202ENST00000526150 URODP06132 367 aa13.6□□□□□ -0.23
COLCA1-202ENST00000526150 ADH1AP07327 375 aa13.6□□□□□ -0.23
COLCA1-202ENST00000526150 ITGA4P13612 1032 aa13.6□□□□□ -0.23
COLCA1-202ENST00000526150 NCLP19338 710 aaKnown RBP13.6□□□□□ -0.23
COLCA1-202ENST00000526150 NPEPPSP55786 919 aa13.6□□□□□ -0.23
COLCA1-202ENST00000526150 POU5F1BQ06416 359 aa13.6□□□□□ -0.23
COLCA1-202ENST00000526150 LAMTOR4Q0VGL1 99 aa13.6□□□□□ -0.23
COLCA1-202ENST00000526150 PTPN14Q15678 1187 aa13.6□□□□□ -0.23
COLCA1-202ENST00000526150 NPY5RQ15761 445 aa13.6□□□□□ -0.23
COLCA1-202ENST00000526150 XKR9Q5GH70 373 aa13.6□□□□□ -0.23
COLCA1-202ENST00000526150 NOTUMQ6P988 496 aa13.6□□□□□ -0.23
COLCA1-202ENST00000526150 TMC5Q6UXY8 1006 aa13.6□□□□□ -0.23
COLCA1-202ENST00000526150 AGMOQ6ZNB7 445 aa13.6□□□□□ -0.23
COLCA1-202ENST00000526150 GPR149Q86SP6 731 aa13.6□□□□□ -0.23
COLCA1-202ENST00000526150 TMEM173Q86WV6 379 aaPredicted RBP13.6□□□□□ -0.23
COLCA1-202ENST00000526150 C12orf76Q8N812 135 aaPredicted RBP13.6□□□□□ -0.23
COLCA1-202ENST00000526150 RNF149Q8NC42 400 aa13.6□□□□□ -0.23
COLCA1-202ENST00000526150 AUTS2Q8WXX7 1259 aa13.6□□□□□ -0.23
COLCA1-202ENST00000526150 CCDC43Q96MW1 224 aaKnown RBP13.6□□□□□ -0.23
COLCA1-202ENST00000526150 MTRQ99707 1265 aa13.6□□□□□ -0.23
COLCA1-202ENST00000526150 LXNQ9BS40 222 aa13.6□□□□□ -0.23
COLCA1-202ENST00000526150 DNAJB4Q9UDY4 337 aa13.6□□□□□ -0.23
COLCA1-202ENST00000526150 LIMD1Q9UGP4 676 aa13.6□□□□□ -0.23
COLCA1-202ENST00000526150 VAV3Q9UKW4 847 aa13.6□□□□□ -0.23
COLCA1-202ENST00000526150 KCNJ14Q9UNX9 436 aa13.6□□□□□ -0.23
COLCA1-202ENST00000526150 CACNA1HO95180 2353 aa13.6□□□□□ -0.23
COLCA1-202ENST00000526150 NRP1O14786 923 aa13.59□□□□□ -0.23
COLCA1-202ENST00000526150 GFRA3O60609 400 aa13.59□□□□□ -0.23
COLCA1-202ENST00000526150 SOD2P04179 222 aa13.59□□□□□ -0.23
COLCA1-202ENST00000526150 CLCN5P51795 746 aa13.59□□□□□ -0.23
COLCA1-202ENST00000526150 EMC2Q15006 297 aa13.59□□□□□ -0.23
COLCA1-202ENST00000526150 ANKRD1Q15327 319 aa13.59□□□□□ -0.23
COLCA1-202ENST00000526150 ASTLQ6HA08 431 aaPredicted RBP13.59□□□□□ -0.23
COLCA1-202ENST00000526150 NCAPH2Q6IBW4 605 aa13.59□□□□□ -0.23
COLCA1-202ENST00000526150 PIK3AP1Q6ZUJ8 805 aa13.59□□□□□ -0.23
COLCA1-202ENST00000526150 FERMT3Q86UX7 667 aa13.59□□□□□ -0.23
COLCA1-202ENST00000526150 ZNF280BQ86YH2 543 aa13.59□□□□□ -0.23
COLCA1-202ENST00000526150 STAMQ92783 540 aa13.59□□□□□ -0.23
COLCA1-202ENST00000526150 TMEM143Q96AN5 459 aa13.59□□□□□ -0.23
COLCA1-202ENST00000526150 AIFM3Q96NN9 605 aa13.59□□□□□ -0.23
COLCA1-202ENST00000526150 KLHL5Q96PQ7 755 aa13.59□□□□□ -0.23
COLCA1-202ENST00000526150 WDFY4Q6ZS81 3184 aa13.59□□□□□ -0.23
COLCA1-202ENST00000526150 MEIS3P2A8K0S8 358 aa13.58□□□□□ -0.24
COLCA1-202ENST00000526150 DDHD2O94830 711 aa13.58□□□□□ -0.24
COLCA1-202ENST00000526150 C1RP00736 705 aa13.58□□□□□ -0.24
COLCA1-202ENST00000526150 SSBP05455 408 aaKnown RBP eCLIP13.58□□□□□ -0.24
COLCA1-202ENST00000526150 WEE2P0C1S8 567 aa13.58□□□□□ -0.24
COLCA1-202ENST00000526150 HOXA11P31270 313 aaPredicted RBP13.58□□□□□ -0.24
COLCA1-202ENST00000526150 CLCN4P51793 760 aa13.58□□□□□ -0.24
COLCA1-202ENST00000526150 TDGQ13569 410 aa13.58□□□□□ -0.24
COLCA1-202ENST00000526150 CMASQ8NFW8 434 aaPredicted RBP13.58□□□□□ -0.24
COLCA1-202ENST00000526150 HDAC7Q8WUI4 952 aa13.58□□□□□ -0.24
COLCA1-202ENST00000526150 PHOX2BQ99453 314 aa13.58□□□□□ -0.24
COLCA1-202ENST00000526150 COLEC11Q9BWP8 271 aa13.58□□□□□ -0.24
COLCA1-202ENST00000526150 TRIM6Q9C030 488 aaPredicted RBP13.58□□□□□ -0.24
COLCA1-202ENST00000526150 IGSF9Q9P2J2 1179 aa13.58□□□□□ -0.24
COLCA1-202ENST00000526150 DAXXQ9UER7 740 aaPredicted RBP13.58□□□□□ -0.24
COLCA1-202ENST00000526150 CDH22Q9UJ99 828 aa13.58□□□□□ -0.24
COLCA1-202ENST00000526150 PROB1E7EW31 1015 aa13.57□□□□□ -0.24
COLCA1-202ENST00000526150 H0Y858 1186 aa13.57□□□□□ -0.24
COLCA1-202ENST00000526150 INO80B-WBP1J3KQ70 363 aa13.57□□□□□ -0.24
COLCA1-202ENST00000526150 DGAT1O75907 488 aa13.57□□□□□ -0.24
COLCA1-202ENST00000526150 PDGFBP01127 241 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms