RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 NFKBIBQ15653 356 aa19.12■□□□□ 0.65
CCS-204ENST00000526066 LONRF3Q496Y0 759 aa19.12■□□□□ 0.65
CCS-204ENST00000526066 XKR9Q5GH70 373 aa19.12■□□□□ 0.65
CCS-204ENST00000526066 ZNF484Q5JVG2 852 aa19.12■□□□□ 0.65
CCS-204ENST00000526066 SPOUT1Q5T280 376 aaKnown RBP19.12■□□□□ 0.65
CCS-204ENST00000526066 KANK3Q6NY19 840 aa19.12■□□□□ 0.65
CCS-204ENST00000526066 KRBA2Q6ZNG9 492 aa19.12■□□□□ 0.65
CCS-204ENST00000526066 CEP57L1Q8IYX8 460 aa19.12■□□□□ 0.65
CCS-204ENST00000526066 EFHBQ8N7U6 833 aa19.12■□□□□ 0.65
CCS-204ENST00000526066 GPT2Q8TD30 523 aa19.12■□□□□ 0.65
CCS-204ENST00000526066 EDAQ92838 391 aa19.12■□□□□ 0.65
CCS-204ENST00000526066 PRRX2Q99811 253 aa19.12■□□□□ 0.65
CCS-204ENST00000526066 BHMT2Q9H2M3 363 aa19.12■□□□□ 0.65
CCS-204ENST00000526066 TNMDQ9H2S6 317 aa19.12■□□□□ 0.65
CCS-204ENST00000526066 CYP26B1Q9NR63 512 aa19.12■□□□□ 0.65
CCS-204ENST00000526066 KBTBD4Q9NVX7 518 aa19.12■□□□□ 0.65
CCS-204ENST00000526066 DACT1Q9NYF0 836 aa19.12■□□□□ 0.65
CCS-204ENST00000526066 SERTAD1Q9UHV2 236 aa19.12■□□□□ 0.65
CCS-204ENST00000526066 KIAA1671Q9BY89 1806 aa19.11■□□□□ 0.65
CCS-204ENST00000526066 A0A087WWV3 80 aa19.11■□□□□ 0.65
CCS-204ENST00000526066 ARHGEF35A5YM69 484 aa19.11■□□□□ 0.65
CCS-204ENST00000526066 ITGB1P05556 798 aa19.11■□□□□ 0.65
CCS-204ENST00000526066 INSRRP14616 1297 aa19.11■□□□□ 0.65
CCS-204ENST00000526066 IBSPP21815 317 aaPredicted RBP19.11■□□□□ 0.65
CCS-204ENST00000526066 NRIP1P48552 1158 aa19.11■□□□□ 0.65
CCS-204ENST00000526066 MARCH8Q5T0T0 291 aa19.11■□□□□ 0.65
CCS-204ENST00000526066 PLA2G4FQ68DD2 849 aa19.11■□□□□ 0.65
CCS-204ENST00000526066 SV2BQ7L1I2 683 aa19.11■□□□□ 0.65
CCS-204ENST00000526066 ELOA2Q8IYF1 753 aaPredicted RBP19.11■□□□□ 0.65
CCS-204ENST00000526066 KLHL23Q8NBE8 558 aa19.11■□□□□ 0.65
CCS-204ENST00000526066 CNNM3Q8NE01 707 aa19.11■□□□□ 0.65
CCS-204ENST00000526066 MICAL1Q8TDZ2 1067 aa19.11■□□□□ 0.65
CCS-204ENST00000526066 POF1BQ8WVV4 589 aa19.11■□□□□ 0.65
CCS-204ENST00000526066 CCDC34Q96HJ3 373 aa19.11■□□□□ 0.65
CCS-204ENST00000526066 CEP170P1Q96L14 293 aa19.11■□□□□ 0.65
CCS-204ENST00000526066 CCDC43Q96MW1 224 aaKnown RBP19.11■□□□□ 0.65
CCS-204ENST00000526066 LRRC27Q9C0I9 530 aa19.11■□□□□ 0.65
CCS-204ENST00000526066 AGO3Q9H9G7 860 aaKnown RBP19.11■□□□□ 0.65
CCS-204ENST00000526066 AAASQ9NRG9 546 aa19.11■□□□□ 0.65
CCS-204ENST00000526066 KCND2Q9NZV8 630 aa19.11■□□□□ 0.65
CCS-204ENST00000526066 PCDHB12Q9Y5F1 795 aa19.11■□□□□ 0.65
CCS-204ENST00000526066 ZNF318Q5VUA4 2279 aa19.11■□□□□ 0.65
CCS-204ENST00000526066 TMEM150BA6NC51 233 aa19.1■□□□□ 0.65
CCS-204ENST00000526066 ZBTB42B2RXF5 422 aa19.1■□□□□ 0.65
CCS-204ENST00000526066 SRGAP2BP0DMP2 458 aa19.1■□□□□ 0.65
CCS-204ENST00000526066 NPEPPSP55786 919 aa19.1■□□□□ 0.65
CCS-204ENST00000526066 TMEM62Q0P6H9 643 aa19.1■□□□□ 0.65
CCS-204ENST00000526066 MCM6Q14566 821 aa19.1■□□□□ 0.65
CCS-204ENST00000526066 ODR4Q5SWX8 454 aa19.1■□□□□ 0.65
CCS-204ENST00000526066 FAM43BQ6ZT52 329 aaPredicted RBP19.1■□□□□ 0.65
CCS-204ENST00000526066 RBM23Q86U06 439 aaKnown RBP19.1■□□□□ 0.65
CCS-204ENST00000526066 EXOC8Q8IYI6 725 aa19.1■□□□□ 0.65
CCS-204ENST00000526066 PBXIP1Q96AQ6 731 aa19.1■□□□□ 0.65
CCS-204ENST00000526066 CEP89Q96ST8 783 aa19.1■□□□□ 0.65
CCS-204ENST00000526066 PADI3Q9ULW8 664 aa19.1■□□□□ 0.65
CCS-204ENST00000526066 RFC5P40937 340 aa19.09■□□□□ 0.65
CCS-204ENST00000526066 PTPN5P54829 565 aa19.09■□□□□ 0.65
CCS-204ENST00000526066 AMPD3Q01432 767 aa19.09■□□□□ 0.65
CCS-204ENST00000526066 COASYQ13057 564 aa19.09■□□□□ 0.65
CCS-204ENST00000526066 MTERF2Q49AM1 385 aa19.09■□□□□ 0.65
CCS-204ENST00000526066 PADI6Q6TGC4 694 aa19.09■□□□□ 0.65
CCS-204ENST00000526066 TRIM67Q6ZTA4 783 aa19.09■□□□□ 0.65
CCS-204ENST00000526066 TRMT1LQ7Z2T5 733 aaKnown RBP19.09■□□□□ 0.65
CCS-204ENST00000526066 SMRP1Q8NCR6 262 aa19.09■□□□□ 0.65
CCS-204ENST00000526066 SPPL3Q8TCT6 385 aa19.09■□□□□ 0.65
CCS-204ENST00000526066 MSLNLQ96KJ4 702 aa19.09■□□□□ 0.65
CCS-204ENST00000526066 CELF4Q9BZC1 486 aaKnown RBP19.09■□□□□ 0.65
CCS-204ENST00000526066 TLE6Q9H808 572 aa19.09■□□□□ 0.65
CCS-204ENST00000526066 PCDHB7Q9Y5E2 793 aa19.09■□□□□ 0.65
CCS-204ENST00000526066 PCDHA2Q9Y5H9 948 aa19.09■□□□□ 0.65
CCS-204ENST00000526066 LOXHD1Q8IVV2 1947 aa19.09■□□□□ 0.65
CCS-204ENST00000526066 TMEM221A6NGB7 291 aa19.08■□□□□ 0.64
CCS-204ENST00000526066 M0R296 226 aa19.08■□□□□ 0.64
CCS-204ENST00000526066 DGAT1O75907 488 aa19.08■□□□□ 0.64
CCS-204ENST00000526066 SSBP05455 408 aaKnown RBP eCLIP19.08■□□□□ 0.64
CCS-204ENST00000526066 MYL1P05976 194 aa19.08■□□□□ 0.64
CCS-204ENST00000526066 CYP11B2P19099 503 aa19.08■□□□□ 0.64
CCS-204ENST00000526066 NFX1Q12986 1120 aaKnown RBP19.08■□□□□ 0.64
CCS-204ENST00000526066 CAMK1Q14012 370 aa19.08■□□□□ 0.64
CCS-204ENST00000526066 KLHL40Q2TBA0 621 aa19.08■□□□□ 0.64
CCS-204ENST00000526066 SKOR2Q2VWA4 1001 aaPredicted RBP19.08■□□□□ 0.64
CCS-204ENST00000526066 RINT1Q6NUQ1 792 aa19.08■□□□□ 0.64
CCS-204ENST00000526066 CNNM4Q6P4Q7 775 aa19.08■□□□□ 0.64
CCS-204ENST00000526066 C1orf186Q6ZWK4 172 aa19.08■□□□□ 0.64
CCS-204ENST00000526066 BMP8AQ7Z5Y6 402 aa19.08■□□□□ 0.64
CCS-204ENST00000526066 GPBP1Q86WP2 473 aa19.08■□□□□ 0.64
CCS-204ENST00000526066 NME8Q8N427 588 aa19.08■□□□□ 0.64
CCS-204ENST00000526066 LINC01599Q8WXQ3 324 aa19.08■□□□□ 0.64
CCS-204ENST00000526066 PAGE5Q96GU1 130 aa19.08■□□□□ 0.64
CCS-204ENST00000526066 MTRQ99707 1265 aa19.08■□□□□ 0.64
CCS-204ENST00000526066 JPH2Q9BR39 696 aaPredicted RBP19.08■□□□□ 0.64
CCS-204ENST00000526066 TIPINQ9BVW5 301 aa19.08■□□□□ 0.64
CCS-204ENST00000526066 DHX33Q9H6R0 707 aaKnown RBP19.08■□□□□ 0.64
CCS-204ENST00000526066 HOOK1Q9UJC3 728 aaKnown RBP19.08■□□□□ 0.64
CCS-204ENST00000526066 IGKV6-21A0A0C4DH24 114 aa19.07■□□□□ 0.64
CCS-204ENST00000526066 SMIM35A0A1B0GVV1 85 aa19.07■□□□□ 0.64
CCS-204ENST00000526066 DENND3A2RUS2 1198 aa19.07■□□□□ 0.64
CCS-204ENST00000526066 MAGEB2O15479 319 aa19.07■□□□□ 0.64
CCS-204ENST00000526066 GAS2O43903 313 aaKnown RBP19.07■□□□□ 0.64
CCS-204ENST00000526066 MAFO75444 373 aaPredicted RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms