RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 COL19A1Q14993 1142 aa18.83■□□□□ 0.6
CCS-203ENST00000526058 ZRSR1Q15695 479 aaKnown RBP18.83■□□□□ 0.6
CCS-203ENST00000526058 CSPP1Q1MSJ5 1256 aa18.83■□□□□ 0.6
CCS-203ENST00000526058 NOTUMQ6P988 496 aa18.83■□□□□ 0.6
CCS-203ENST00000526058 GLB1LQ6UWU2 654 aa18.83■□□□□ 0.6
CCS-203ENST00000526058 EP400NLQ6ZTU2 488 aa18.83■□□□□ 0.6
CCS-203ENST00000526058 BRAPQ7Z569 592 aa18.83■□□□□ 0.6
CCS-203ENST00000526058 CDR2LQ86X02 465 aaPredicted RBP18.83■□□□□ 0.6
CCS-203ENST00000526058 INTS4Q96HW7 963 aaKnown RBP18.83■□□□□ 0.6
CCS-203ENST00000526058 NECAB3Q96P71 396 aaPredicted RBP18.83■□□□□ 0.6
CCS-203ENST00000526058 RNF39Q9H2S5 420 aa18.83■□□□□ 0.6
CCS-203ENST00000526058 TBC1D13Q9NVG8 400 aa18.83■□□□□ 0.6
CCS-203ENST00000526058 CLDND1Q9NY35 253 aa18.83■□□□□ 0.6
CCS-203ENST00000526058 DNM3Q9UQ16 869 aa18.83■□□□□ 0.6
CCS-203ENST00000526058 C5orf42Q9H799 3197 aa18.82■□□□□ 0.6
CCS-203ENST00000526058 NT5C1B-RDH14C9J2C7 533 aa18.82■□□□□ 0.6
CCS-203ENST00000526058 H3BQ06 376 aaPredicted RBP18.82■□□□□ 0.6
CCS-203ENST00000526058 EYA4O95677 639 aa18.82■□□□□ 0.6
CCS-203ENST00000526058 NCLP19338 710 aaKnown RBP18.82■□□□□ 0.6
CCS-203ENST00000526058 SYT1P21579 422 aa18.82■□□□□ 0.6
CCS-203ENST00000526058 PLCB3Q01970 1234 aa18.82■□□□□ 0.6
CCS-203ENST00000526058 NOMO2Q5JPE7 1267 aa18.82■□□□□ 0.6
CCS-203ENST00000526058 ARL6IP4Q66PJ3 421 aaKnown RBP18.82■□□□□ 0.6
CCS-203ENST00000526058 CDCA2Q69YH5 1023 aaPredicted RBP18.82■□□□□ 0.6
CCS-203ENST00000526058 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.82■□□□□ 0.6
CCS-203ENST00000526058 MICAL1Q8TDZ2 1067 aa18.82■□□□□ 0.6
CCS-203ENST00000526058 PNMA5Q96PV4 448 aa18.82■□□□□ 0.6
CCS-203ENST00000526058 PLIN2Q99541 437 aa18.82■□□□□ 0.6
CCS-203ENST00000526058 CSRNP2Q9H175 543 aa18.82■□□□□ 0.6
CCS-203ENST00000526058 RSAD1Q9HA92 442 aa18.82■□□□□ 0.6
CCS-203ENST00000526058 TLR9Q9NR96 1032 aa18.82■□□□□ 0.6
CCS-203ENST00000526058 IPPQ9Y573 584 aa18.82■□□□□ 0.6
CCS-203ENST00000526058 TTLL13PA6NNM8 815 aa18.81■□□□□ 0.6
CCS-203ENST00000526058 LINC01565O15544 149 aa18.81■□□□□ 0.6
CCS-203ENST00000526058 B4GALT3O60512 393 aa18.81■□□□□ 0.6
CCS-203ENST00000526058 ZC3H11AO75152 810 aaKnown RBP eCLIP18.81■□□□□ 0.6
CCS-203ENST00000526058 LTBRP36941 435 aa18.81■□□□□ 0.6
CCS-203ENST00000526058 BCAR1P56945 870 aa18.81■□□□□ 0.6
CCS-203ENST00000526058 DLX2Q07687 328 aaPredicted RBP18.81■□□□□ 0.6
CCS-203ENST00000526058 CTC1Q2NKJ3 1217 aa18.81■□□□□ 0.6
CCS-203ENST00000526058 LEXMQ3ZCV2 418 aa18.81■□□□□ 0.6
CCS-203ENST00000526058 RBM23Q86U06 439 aaKnown RBP18.81■□□□□ 0.6
CCS-203ENST00000526058 ZBTB8OSQ8IWT0 167 aa18.81■□□□□ 0.6
CCS-203ENST00000526058 SLC39A11Q8N1S5 342 aa18.81■□□□□ 0.6
CCS-203ENST00000526058 MRPS27Q92552 414 aaKnown RBP18.81■□□□□ 0.6
CCS-203ENST00000526058 CCDC51Q96ER9 411 aa18.81■□□□□ 0.6
CCS-203ENST00000526058 UHRF1Q96T88 793 aaPredicted RBP18.81■□□□□ 0.6
CCS-203ENST00000526058 RUSC1Q9BVN2 902 aa18.81■□□□□ 0.6
CCS-203ENST00000526058 GBP3Q9H0R5 595 aa18.81■□□□□ 0.6
CCS-203ENST00000526058 FZD8Q9H461 694 aa18.81■□□□□ 0.6
CCS-203ENST00000526058 NRDE2Q9H7Z3 1164 aa18.81■□□□□ 0.6
CCS-203ENST00000526058 SPG21Q9NZD8 308 aa18.81■□□□□ 0.6
CCS-203ENST00000526058 USP20Q9Y2K6 914 aa18.81■□□□□ 0.6
CCS-203ENST00000526058 HES2Q9Y543 173 aa18.81■□□□□ 0.6
CCS-203ENST00000526058 A0A1B0GUA9 196 aa18.8■□□□□ 0.6
CCS-203ENST00000526058 FSCN2O14926 492 aa18.8■□□□□ 0.6
CCS-203ENST00000526058 EDN1P05305 212 aa18.8■□□□□ 0.6
CCS-203ENST00000526058 ITGA4P13612 1032 aa18.8■□□□□ 0.6
CCS-203ENST00000526058 PPM1AP35813 382 aa18.8■□□□□ 0.6
CCS-203ENST00000526058 NAMPTP43490 491 aa18.8■□□□□ 0.6
CCS-203ENST00000526058 NRIP1P48552 1158 aa18.8■□□□□ 0.6
CCS-203ENST00000526058 ALDH7A1P49419 539 aaKnown RBP18.8■□□□□ 0.6
CCS-203ENST00000526058 RNASELQ05823 741 aaKnown RBP18.8■□□□□ 0.6
CCS-203ENST00000526058 SF3A1Q15459 793 aaKnown RBP18.8■□□□□ 0.6
CCS-203ENST00000526058 HYIQ5T013 277 aa18.8■□□□□ 0.6
CCS-203ENST00000526058 RINT1Q6NUQ1 792 aa18.8■□□□□ 0.6
CCS-203ENST00000526058 PPP4R3CPQ6ZMV5 832 aa18.8■□□□□ 0.6
CCS-203ENST00000526058 TMEM173Q86WV6 379 aaPredicted RBP18.8■□□□□ 0.6
CCS-203ENST00000526058 ZNF280BQ86YH2 543 aa18.8■□□□□ 0.6
CCS-203ENST00000526058 CNNM3Q8NE01 707 aa18.8■□□□□ 0.6
CCS-203ENST00000526058 RSPH1Q8WYR4 309 aa18.8■□□□□ 0.6
CCS-203ENST00000526058 KIFC3Q9BVG8 833 aa18.8■□□□□ 0.6
CCS-203ENST00000526058 PRMT7Q9NVM4 692 aaPredicted RBP18.8■□□□□ 0.6
CCS-203ENST00000526058 DNAJB4Q9UDY4 337 aa18.8■□□□□ 0.6
CCS-203ENST00000526058 LZTS1Q9Y250 596 aa18.8■□□□□ 0.6
CCS-203ENST00000526058 CNTNAP2Q9UHC6 1331 aa18.79■□□□□ 0.6
CCS-203ENST00000526058 TDRD15B5MCY1 1934 aaKnown RBP18.79■□□□□ 0.6
CCS-203ENST00000526058 PER2O15055 1255 aa18.79■□□□□ 0.6
CCS-203ENST00000526058 NCK2O43639 380 aa18.79■□□□□ 0.6
CCS-203ENST00000526058 DDHD2O94830 711 aa18.79■□□□□ 0.6
CCS-203ENST00000526058 NPTXRO95502 500 aa18.79■□□□□ 0.6
CCS-203ENST00000526058 POMCP01189 267 aa18.79■□□□□ 0.6
CCS-203ENST00000526058 LIG1P18858 919 aa18.79■□□□□ 0.6
CCS-203ENST00000526058 GRIN1Q05586 938 aa18.79■□□□□ 0.6
CCS-203ENST00000526058 RESTQ13127 1097 aa18.79■□□□□ 0.6
CCS-203ENST00000526058 ADAM15Q13444 863 aa18.79■□□□□ 0.6
CCS-203ENST00000526058 PPP2R5AQ15172 486 aa18.79■□□□□ 0.6
CCS-203ENST00000526058 FAM187BQ17R55 369 aa18.79■□□□□ 0.6
CCS-203ENST00000526058 FAM173BQ6P4H8 233 aa18.79■□□□□ 0.6
CCS-203ENST00000526058 DEPTORQ8TB45 409 aa18.79■□□□□ 0.6
CCS-203ENST00000526058 URGCPQ8TCY9 931 aa18.79■□□□□ 0.6
CCS-203ENST00000526058 KIFAP3Q92845 792 aa18.79■□□□□ 0.6
CCS-203ENST00000526058 SNX21Q969T3 373 aa18.79■□□□□ 0.6
CCS-203ENST00000526058 IFT74Q96LB3 600 aa18.79■□□□□ 0.6
CCS-203ENST00000526058 PRIMPOLQ96LW4 560 aa18.79■□□□□ 0.6
CCS-203ENST00000526058 APOL6Q9BWW8 343 aa18.79■□□□□ 0.6
CCS-203ENST00000526058 CCDC113Q9H0I3 377 aa18.79■□□□□ 0.6
CCS-203ENST00000526058 C2orf40Q9H1Z8 148 aa18.79■□□□□ 0.6
CCS-203ENST00000526058 NXF3Q9H4D5 531 aaKnown RBP18.79■□□□□ 0.6
CCS-203ENST00000526058 PUF60Q9UHX1 559 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms