RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 URGCPQ8TCY9 931 aa7.37□□□□□ -1.23
CD44-221ENST00000526000 PRPF31Q8WWY3 499 aaKnown RBP7.37□□□□□ -1.23
CD44-221ENST00000526000 PGBD4Q96DM1 585 aa7.37□□□□□ -1.23
CD44-221ENST00000526000 CEP170P1Q96L14 293 aa7.37□□□□□ -1.23
CD44-221ENST00000526000 MYADMQ96S97 322 aa7.37□□□□□ -1.23
CD44-221ENST00000526000 EMILIN2Q9BXX0 1053 aa7.37□□□□□ -1.23
CD44-221ENST00000526000 EIF2AQ9BY44 585 aaKnown RBP7.37□□□□□ -1.23
CD44-221ENST00000526000 INO80BQ9C086 356 aaPredicted RBP7.37□□□□□ -1.23
CD44-221ENST00000526000 RSAD1Q9HA92 442 aa7.37□□□□□ -1.23
CD44-221ENST00000526000 PIDD1Q9HB75 910 aa7.37□□□□□ -1.23
CD44-221ENST00000526000 MAN1C1Q9NR34 630 aa7.37□□□□□ -1.23
CD44-221ENST00000526000 MRPL17Q9NRX2 175 aaKnown RBP7.37□□□□□ -1.23
CD44-221ENST00000526000 GJB4Q9NTQ9 266 aa7.37□□□□□ -1.23
CD44-221ENST00000526000 DZANK1Q9NVP4 752 aa7.37□□□□□ -1.23
CD44-221ENST00000526000 RGL1Q9NZL6 768 aa7.37□□□□□ -1.23
CD44-221ENST00000526000 CACNG4Q9UBN1 327 aa7.37□□□□□ -1.23
CD44-221ENST00000526000 HES2Q9Y543 173 aa7.37□□□□□ -1.23
CD44-221ENST00000526000 R4GN57 208 aa7.37□□□□□ -1.23
CD44-221ENST00000526000 RIF1Q5UIP0 2472 aaKnown RBP7.37□□□□□ -1.23
CD44-221ENST00000526000 IGKV6-21A0A0C4DH24 114 aa7.36□□□□□ -1.23
CD44-221ENST00000526000 KRBA1A5PL33 1030 aa7.36□□□□□ -1.23
CD44-221ENST00000526000 TEX28O15482 410 aa7.36□□□□□ -1.23
CD44-221ENST00000526000 SLC37A4O43826 429 aa7.36□□□□□ -1.23
CD44-221ENST00000526000 GAS2O43903 313 aaKnown RBP7.36□□□□□ -1.23
CD44-221ENST00000526000 LILRB3O75022 631 aa7.36□□□□□ -1.23
CD44-221ENST00000526000 N4BP1O75113 896 aaKnown RBP7.36□□□□□ -1.23
CD44-221ENST00000526000 ZNF623O75123 536 aa7.36□□□□□ -1.23
CD44-221ENST00000526000 DCNP07585 359 aaKnown RBP7.36□□□□□ -1.23
CD44-221ENST00000526000 SKIP12755 728 aa7.36□□□□□ -1.23
CD44-221ENST00000526000 ITGA4P13612 1032 aa7.36□□□□□ -1.23
CD44-221ENST00000526000 IFNAR1P17181 557 aa7.36□□□□□ -1.23
CD44-221ENST00000526000 RPL17P18621 184 aaKnown RBP7.36□□□□□ -1.23
CD44-221ENST00000526000 HOXA11P31270 313 aaPredicted RBP7.36□□□□□ -1.23
CD44-221ENST00000526000 NBL1P41271 181 aa7.36□□□□□ -1.23
CD44-221ENST00000526000 ID4P47928 161 aa7.36□□□□□ -1.23
CD44-221ENST00000526000 CLCN4P51793 760 aa7.36□□□□□ -1.23
CD44-221ENST00000526000 CLCN5P51795 746 aa7.36□□□□□ -1.23
CD44-221ENST00000526000 PSMC5P62195 406 aa7.36□□□□□ -1.23
CD44-221ENST00000526000 CYP4A11Q02928 519 aa7.36□□□□□ -1.23
CD44-221ENST00000526000 LAMTOR4Q0VGL1 99 aa7.36□□□□□ -1.23
CD44-221ENST00000526000 CTTNQ14247 550 aaKnown RBP7.36□□□□□ -1.23
CD44-221ENST00000526000 ANGPT1Q15389 498 aa7.36□□□□□ -1.23
CD44-221ENST00000526000 Q4G0T1 1027 aa7.36□□□□□ -1.23
CD44-221ENST00000526000 XKR9Q5GH70 373 aa7.36□□□□□ -1.23
CD44-221ENST00000526000 UBXN11Q5T124 520 aa7.36□□□□□ -1.23
CD44-221ENST00000526000 FAM43BQ6ZT52 329 aaPredicted RBP7.36□□□□□ -1.23
CD44-221ENST00000526000 MAEAQ7L5Y9 396 aa7.36□□□□□ -1.23
CD44-221ENST00000526000 PPFIBP1Q86W92 1011 aa7.36□□□□□ -1.23
CD44-221ENST00000526000 TPH2Q8IWU9 490 aa7.36□□□□□ -1.23
CD44-221ENST00000526000 BLIDQ8IZY5 108 aa7.36□□□□□ -1.23
CD44-221ENST00000526000 SLC44A3Q8N4M1 653 aa7.36□□□□□ -1.23
CD44-221ENST00000526000 RNF149Q8NC42 400 aa7.36□□□□□ -1.23
CD44-221ENST00000526000 CCDC148Q8NFR7 591 aa7.36□□□□□ -1.23
CD44-221ENST00000526000 SMG7Q92540 1137 aaKnown RBP7.36□□□□□ -1.23
CD44-221ENST00000526000 DYDC2Q96IM9 177 aa7.36□□□□□ -1.23
CD44-221ENST00000526000 GAD1Q99259 594 aa7.36□□□□□ -1.23
CD44-221ENST00000526000 RNF26Q9BY78 433 aaPredicted RBP7.36□□□□□ -1.23
CD44-221ENST00000526000 SFXN1Q9H9B4 322 aa7.36□□□□□ -1.23
CD44-221ENST00000526000 IFT122Q9HBG6 1241 aa7.36□□□□□ -1.23
CD44-221ENST00000526000 KLK14Q9P0G3 267 aa7.36□□□□□ -1.23
CD44-221ENST00000526000 WRAP73Q9P2S5 460 aaPredicted RBP7.36□□□□□ -1.23
CD44-221ENST00000526000 DDX25Q9UHL0 483 aaKnown RBP7.36□□□□□ -1.23
CD44-221ENST00000526000 PCDHA4Q9UN74 947 aa7.36□□□□□ -1.23
CD44-221ENST00000526000 USTQ9Y2C2 406 aa7.36□□□□□ -1.23
CD44-221ENST00000526000 COL4A3BPQ9Y5P4 624 aa7.36□□□□□ -1.23
CD44-221ENST00000526000 PROB1E7EW31 1015 aa7.35□□□□□ -1.23
CD44-221ENST00000526000 CPLX1O14810 134 aa7.35□□□□□ -1.23
CD44-221ENST00000526000 INPPL1O15357 1258 aa7.35□□□□□ -1.23
CD44-221ENST00000526000 LRRN2O75325 713 aa7.35□□□□□ -1.23
CD44-221ENST00000526000 URODP06132 367 aa7.35□□□□□ -1.23
CD44-221ENST00000526000 AOC1P19801 751 aa7.35□□□□□ -1.23
CD44-221ENST00000526000 AKAP5P24588 427 aa7.35□□□□□ -1.23
CD44-221ENST00000526000 HSPA4P34932 840 aa7.35□□□□□ -1.23
CD44-221ENST00000526000 QARSP47897 775 aaKnown RBP7.35□□□□□ -1.23
CD44-221ENST00000526000 SCNN1GP51170 649 aa7.35□□□□□ -1.23
CD44-221ENST00000526000 FOSBP53539 338 aa7.35□□□□□ -1.23
CD44-221ENST00000526000 NTHL1P78549 312 aa7.35□□□□□ -1.23
CD44-221ENST00000526000 CDC42EP1Q00587 391 aa7.35□□□□□ -1.23
CD44-221ENST00000526000 GIT2Q14161 759 aa7.35□□□□□ -1.23
CD44-221ENST00000526000 NONOQ15233 471 aaKnown RBP eCLIP7.35□□□□□ -1.23
CD44-221ENST00000526000 NCAPH2Q6IBW4 605 aa7.35□□□□□ -1.23
CD44-221ENST00000526000 POTEGQ6S5H5 508 aa7.35□□□□□ -1.23
CD44-221ENST00000526000 MRPL10Q7Z7H8 261 aaKnown RBP7.35□□□□□ -1.23
CD44-221ENST00000526000 ZNF410Q86VK4 478 aa7.35□□□□□ -1.23
CD44-221ENST00000526000 TEX2Q8IWB9 1127 aa7.35□□□□□ -1.23
CD44-221ENST00000526000 TRIM22Q8IYM9 498 aa7.35□□□□□ -1.23
CD44-221ENST00000526000 KIAA2013Q8IYS2 634 aa7.35□□□□□ -1.23
CD44-221ENST00000526000 ZNF710Q8N1W2 664 aa7.35□□□□□ -1.23
CD44-221ENST00000526000 DCLK2Q8N568 766 aa7.35□□□□□ -1.23
CD44-221ENST00000526000 SMG8Q8ND04 991 aaKnown RBP7.35□□□□□ -1.23
CD44-221ENST00000526000 ETNPPLQ8TBG4 499 aa7.35□□□□□ -1.23
CD44-221ENST00000526000 OXER1Q8TDS5 423 aa7.35□□□□□ -1.23
CD44-221ENST00000526000 ZFP42Q96MM3 310 aa7.35□□□□□ -1.23
CD44-221ENST00000526000 RPS6KC1Q96S38 1066 aa7.35□□□□□ -1.23
CD44-221ENST00000526000 HINFPQ9BQA5 517 aa7.35□□□□□ -1.23
CD44-221ENST00000526000 RPP25Q9BUL9 199 aaKnown RBP7.35□□□□□ -1.23
CD44-221ENST00000526000 AGPAT5Q9NUQ2 364 aa7.35□□□□□ -1.23
CD44-221ENST00000526000 MARCH5Q9NX47 278 aa7.35□□□□□ -1.23
CD44-221ENST00000526000 PARP2Q9UGN5 583 aa7.35□□□□□ -1.23
CD44-221ENST00000526000 USP20Q9Y2K6 914 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms