RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 MRPL9Q9BYD2 267 aaKnown RBP13.42□□□□□ -0.26
SSBP3-210ENST00000525990 POLR3FQ9H1D9 316 aaPredicted RBP13.42□□□□□ -0.26
SSBP3-210ENST00000525990 ANKEF1Q9NU02 776 aa13.42□□□□□ -0.26
SSBP3-210ENST00000525990 PPME1Q9Y570 386 aa13.42□□□□□ -0.26
SSBP3-210ENST00000525990 MYH11P35749 1972 aa13.41□□□□□ -0.26
SSBP3-210ENST00000525990 GAS2O43903 313 aaKnown RBP13.41□□□□□ -0.26
SSBP3-210ENST00000525990 EIF5BO60841 1220 aaKnown RBP13.41□□□□□ -0.26
SSBP3-210ENST00000525990 POMCP01189 267 aa13.41□□□□□ -0.26
SSBP3-210ENST00000525990 GALTP07902 379 aa13.41□□□□□ -0.26
SSBP3-210ENST00000525990 CA8P35219 290 aa13.41□□□□□ -0.26
SSBP3-210ENST00000525990 PPM1AP35813 382 aa13.41□□□□□ -0.26
SSBP3-210ENST00000525990 SLC11A1P49279 550 aa13.41□□□□□ -0.26
SSBP3-210ENST00000525990 RBM25P49756 843 aaKnown RBP13.41□□□□□ -0.26
SSBP3-210ENST00000525990 TOB1P50616 345 aaPredicted RBP13.41□□□□□ -0.26
SSBP3-210ENST00000525990 RAB27AP51159 221 aa13.41□□□□□ -0.26
SSBP3-210ENST00000525990 TMEM31Q5JXX7 168 aa13.41□□□□□ -0.26
SSBP3-210ENST00000525990 MRPL10Q7Z7H8 261 aaKnown RBP13.41□□□□□ -0.26
SSBP3-210ENST00000525990 NOSTRINQ8IVI9 506 aa13.41□□□□□ -0.26
SSBP3-210ENST00000525990 C4orf32Q8N8J7 132 aa13.41□□□□□ -0.26
SSBP3-210ENST00000525990 BSNDQ8WZ55 320 aa13.41□□□□□ -0.26
SSBP3-210ENST00000525990 ZSCAN31Q96LW9 406 aaPredicted RBP13.41□□□□□ -0.26
SSBP3-210ENST00000525990 FOXP1Q9H334 677 aaPredicted RBP13.41□□□□□ -0.26
SSBP3-210ENST00000525990 RSAD1Q9HA92 442 aa13.41□□□□□ -0.26
SSBP3-210ENST00000525990 POLD4Q9HCU8 107 aa13.41□□□□□ -0.26
SSBP3-210ENST00000525990 PRKAG3Q9UGI9 489 aa13.41□□□□□ -0.26
SSBP3-210ENST00000525990 PUF60Q9UHX1 559 aaKnown RBP13.41□□□□□ -0.26
SSBP3-210ENST00000525990 MUTYHQ9UIF7 546 aa13.41□□□□□ -0.26
SSBP3-210ENST00000525990 FAM50BQ9Y247 325 aa13.41□□□□□ -0.26
SSBP3-210ENST00000525990 IPPQ9Y573 584 aa13.41□□□□□ -0.26
SSBP3-210ENST00000525990 C2orf71A6NGG8 1288 aa13.4□□□□□ -0.26
SSBP3-210ENST00000525990 TTLL13PA6NNM8 815 aa13.4□□□□□ -0.26
SSBP3-210ENST00000525990 F8W810 466 aa13.4□□□□□ -0.26
SSBP3-210ENST00000525990 INO80B-WBP1J3KQ70 363 aa13.4□□□□□ -0.26
SSBP3-210ENST00000525990 ASAP2O43150 1006 aa13.4□□□□□ -0.26
SSBP3-210ENST00000525990 DGAT1O75907 488 aa13.4□□□□□ -0.26
SSBP3-210ENST00000525990 ERLIN2O94905 339 aa13.4□□□□□ -0.26
SSBP3-210ENST00000525990 EDN1P05305 212 aa13.4□□□□□ -0.26
SSBP3-210ENST00000525990 OR52Z1P0C646 297 aa13.4□□□□□ -0.26
SSBP3-210ENST00000525990 ARF4P18085 180 aaPredicted RBP13.4□□□□□ -0.26
SSBP3-210ENST00000525990 SP100P23497 879 aaPredicted RBP13.4□□□□□ -0.26
SSBP3-210ENST00000525990 ALDH7A1P49419 539 aaKnown RBP13.4□□□□□ -0.26
SSBP3-210ENST00000525990 HMGN5P82970 282 aaKnown RBP13.4□□□□□ -0.26
SSBP3-210ENST00000525990 KRT17Q04695 432 aa13.4□□□□□ -0.26
SSBP3-210ENST00000525990 RNASELQ05823 741 aaKnown RBP13.4□□□□□ -0.26
SSBP3-210ENST00000525990 KANK3Q6NY19 840 aa13.4□□□□□ -0.26
SSBP3-210ENST00000525990 SYCE2Q6PIF2 218 aa13.4□□□□□ -0.26
SSBP3-210ENST00000525990 EXOC8Q8IYI6 725 aa13.4□□□□□ -0.26
SSBP3-210ENST00000525990 VPS52Q8N1B4 723 aa13.4□□□□□ -0.26
SSBP3-210ENST00000525990 FAM184AQ8NB25 1140 aa13.4□□□□□ -0.26
SSBP3-210ENST00000525990 TMEM169Q96HH4 297 aa13.4□□□□□ -0.26
SSBP3-210ENST00000525990 IGSF21Q96ID5 467 aa13.4□□□□□ -0.26
SSBP3-210ENST00000525990 ZFP42Q96MM3 310 aa13.4□□□□□ -0.26
SSBP3-210ENST00000525990 CCDC43Q96MW1 224 aaKnown RBP13.4□□□□□ -0.26
SSBP3-210ENST00000525990 APOL6Q9BWW8 343 aa13.4□□□□□ -0.26
SSBP3-210ENST00000525990 ZBP1Q9H171 429 aa13.4□□□□□ -0.26
SSBP3-210ENST00000525990 S1PR5Q9H228 398 aa13.4□□□□□ -0.26
SSBP3-210ENST00000525990 NXF3Q9H4D5 531 aaKnown RBP13.4□□□□□ -0.26
SSBP3-210ENST00000525990 SH2B1Q9NRF2 756 aaPredicted RBP13.4□□□□□ -0.26
SSBP3-210ENST00000525990 MIOSQ9NXC5 875 aa13.4□□□□□ -0.26
SSBP3-210ENST00000525990 USP20Q9Y2K6 914 aa13.4□□□□□ -0.26
SSBP3-210ENST00000525990 PCDHB6Q9Y5E3 794 aa13.4□□□□□ -0.26
SSBP3-210ENST00000525990 HCFC2Q9Y5Z7 792 aa13.4□□□□□ -0.26
SSBP3-210ENST00000525990 LRRIQ4A6NIV6 560 aa13.39□□□□□ -0.27
SSBP3-210ENST00000525990 PP2D1A8MPX8 630 aa13.39□□□□□ -0.27
SSBP3-210ENST00000525990 GPR37L1O60883 481 aa13.39□□□□□ -0.27
SSBP3-210ENST00000525990 CLASP2O75122 1294 aaKnown RBP13.39□□□□□ -0.27
SSBP3-210ENST00000525990 SKIP12755 728 aa13.39□□□□□ -0.27
SSBP3-210ENST00000525990 NCLP19338 710 aaKnown RBP13.39□□□□□ -0.27
SSBP3-210ENST00000525990 MLH1P40692 756 aa13.39□□□□□ -0.27
SSBP3-210ENST00000525990 GNL2Q13823 731 aaKnown RBP13.39□□□□□ -0.27
SSBP3-210ENST00000525990 MXD4Q14582 209 aaPredicted RBP13.39□□□□□ -0.27
SSBP3-210ENST00000525990 SMC1AQ14683 1233 aaKnown RBP13.39□□□□□ -0.27
SSBP3-210ENST00000525990 PDE12Q6L8Q7 609 aaKnown RBP13.39□□□□□ -0.27
SSBP3-210ENST00000525990 ANKRD54Q6NXT1 300 aa13.39□□□□□ -0.27
SSBP3-210ENST00000525990 IFNLR1Q8IU57 520 aaPredicted RBP13.39□□□□□ -0.27
SSBP3-210ENST00000525990 RNF135Q8IUD6 432 aa13.39□□□□□ -0.27
SSBP3-210ENST00000525990 MRPL43Q8N983 215 aaKnown RBP13.39□□□□□ -0.27
SSBP3-210ENST00000525990 PGBD4Q96DM1 585 aa13.39□□□□□ -0.27
SSBP3-210ENST00000525990 CDCA3Q99618 268 aaPredicted RBP13.39□□□□□ -0.27
SSBP3-210ENST00000525990 TUFT1Q9NNX1 390 aa13.39□□□□□ -0.27
SSBP3-210ENST00000525990 NGRNQ9NPE2 291 aaKnown RBP13.39□□□□□ -0.27
SSBP3-210ENST00000525990 CACNG4Q9UBN1 327 aa13.39□□□□□ -0.27
SSBP3-210ENST00000525990 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.38□□□□□ -0.27
SSBP3-210ENST00000525990 DCXO43602 365 aa13.38□□□□□ -0.27
SSBP3-210ENST00000525990 CXCL14O95715 111 aa13.38□□□□□ -0.27
SSBP3-210ENST00000525990 SSBP05455 408 aaKnown RBP eCLIP13.38□□□□□ -0.27
SSBP3-210ENST00000525990 WEE2P0C1S8 567 aa13.38□□□□□ -0.27
SSBP3-210ENST00000525990 EPCAMP16422 314 aa13.38□□□□□ -0.27
SSBP3-210ENST00000525990 AKAP5P24588 427 aa13.38□□□□□ -0.27
SSBP3-210ENST00000525990 U2AF2P26368 475 aaKnown RBP eCLIP13.38□□□□□ -0.27
SSBP3-210ENST00000525990 SCNN1GP51170 649 aa13.38□□□□□ -0.27
SSBP3-210ENST00000525990 TFDP1Q14186 410 aa13.38□□□□□ -0.27
SSBP3-210ENST00000525990 IL17AQ16552 155 aa13.38□□□□□ -0.27
SSBP3-210ENST00000525990 NOTUMQ6P988 496 aa13.38□□□□□ -0.27
SSBP3-210ENST00000525990 TMEM184AQ6ZMB5 413 aa13.38□□□□□ -0.27
SSBP3-210ENST00000525990 C12orf76Q8N812 135 aaPredicted RBP13.38□□□□□ -0.27
SSBP3-210ENST00000525990 URGCPQ8TCY9 931 aa13.38□□□□□ -0.27
SSBP3-210ENST00000525990 SUSD6Q92537 303 aa13.38□□□□□ -0.27
SSBP3-210ENST00000525990 RABGGTAQ92696 567 aa13.38□□□□□ -0.27
SSBP3-210ENST00000525990 RPGRIP1Q96KN7 1286 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms