RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 LETM2Q2VYF4 491 aa12.08□□□□□ -0.48
CLNS1A-204ENST00000525428 LRRC55Q6ZSA7 311 aa12.08□□□□□ -0.48
CLNS1A-204ENST00000525428 ZNF365Q70YC5 407 aa12.08□□□□□ -0.48
CLNS1A-204ENST00000525428 NT5DC3Q86UY8 548 aa12.08□□□□□ -0.48
CLNS1A-204ENST00000525428 LCA5Q86VQ0 697 aa12.08□□□□□ -0.48
CLNS1A-204ENST00000525428 VGLL2Q8N8G2 317 aa12.08□□□□□ -0.48
CLNS1A-204ENST00000525428 ENDOVQ8N8Q3 282 aaKnown RBP12.08□□□□□ -0.48
CLNS1A-204ENST00000525428 SLC7A6OSQ96CW6 309 aaPredicted RBP12.08□□□□□ -0.48
CLNS1A-204ENST00000525428 HIC2Q96JB3 615 aa12.08□□□□□ -0.48
CLNS1A-204ENST00000525428 PPP1R9AQ9ULJ8 1098 aa12.08□□□□□ -0.48
CLNS1A-204ENST00000525428 PFASO15067 1338 aa12.08□□□□□ -0.48
CLNS1A-204ENST00000525428 DDX60Q8IY21 1712 aaKnown RBP12.08□□□□□ -0.48
CLNS1A-204ENST00000525428 MAGEA13PA6NCF6 341 aa12.08□□□□□ -0.48
CLNS1A-204ENST00000525428 A6NJR5 290 aa12.08□□□□□ -0.48
CLNS1A-204ENST00000525428 ZNF189O75820 626 aaPredicted RBP12.08□□□□□ -0.48
CLNS1A-204ENST00000525428 FUT4P22083 530 aa12.08□□□□□ -0.48
CLNS1A-204ENST00000525428 PSMC4P43686 418 aa12.08□□□□□ -0.48
CLNS1A-204ENST00000525428 GYG1P46976 350 aa12.08□□□□□ -0.48
CLNS1A-204ENST00000525428 NEK3P51956 506 aa12.08□□□□□ -0.48
CLNS1A-204ENST00000525428 UBE4AQ14139 1066 aa12.08□□□□□ -0.48
CLNS1A-204ENST00000525428 U2AF1L4Q8WU68 220 aaKnown RBP12.08□□□□□ -0.48
CLNS1A-204ENST00000525428 CAMKK2Q96RR4 588 aa12.08□□□□□ -0.48
CLNS1A-204ENST00000525428 ZNF219Q9P2Y4 722 aaPredicted RBP12.08□□□□□ -0.48
CLNS1A-204ENST00000525428 MTRF1LQ9UGC7 380 aaKnown RBP12.08□□□□□ -0.48
CLNS1A-204ENST00000525428 SEC63Q9UGP8 760 aaKnown RBP12.08□□□□□ -0.48
CLNS1A-204ENST00000525428 AMFRQ9UKV5 643 aa12.08□□□□□ -0.48
CLNS1A-204ENST00000525428 NID2Q14112 1375 aa12.08□□□□□ -0.48
CLNS1A-204ENST00000525428 CNTNAP5Q8WYK1 1306 aa12.08□□□□□ -0.48
CLNS1A-204ENST00000525428 MYMKA6NI61 221 aa12.07□□□□□ -0.48
CLNS1A-204ENST00000525428 T-ENOLP0DO92 83 aa12.07□□□□□ -0.48
CLNS1A-204ENST00000525428 TM4SF1P30408 202 aa12.07□□□□□ -0.48
CLNS1A-204ENST00000525428 FOXN2P32314 431 aa12.07□□□□□ -0.48
CLNS1A-204ENST00000525428 SKIV2L2P42285 1042 aaKnown RBP12.07□□□□□ -0.48
CLNS1A-204ENST00000525428 PTENP60484 403 aa12.07□□□□□ -0.48
CLNS1A-204ENST00000525428 RPS8P62241 208 aaKnown RBP12.07□□□□□ -0.48
CLNS1A-204ENST00000525428 EVX2Q03828 476 aa12.07□□□□□ -0.48
CLNS1A-204ENST00000525428 KPNB1Q14974 876 aaKnown RBP12.07□□□□□ -0.48
CLNS1A-204ENST00000525428 FAM47AQ5JRC9 791 aa12.07□□□□□ -0.48
CLNS1A-204ENST00000525428 DCAF12L1Q5VU92 463 aa12.07□□□□□ -0.48
CLNS1A-204ENST00000525428 HS2ST1Q7LGA3 356 aa12.07□□□□□ -0.48
CLNS1A-204ENST00000525428 ANKRD23Q86SG2 305 aa12.07□□□□□ -0.48
CLNS1A-204ENST00000525428 DNAJC1Q96KC8 554 aaKnown RBP12.07□□□□□ -0.48
CLNS1A-204ENST00000525428 SPATA16Q9BXB7 569 aa12.07□□□□□ -0.48
CLNS1A-204ENST00000525428 CCSER1Q9C0I3 900 aa12.07□□□□□ -0.48
CLNS1A-204ENST00000525428 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.07□□□□□ -0.48
CLNS1A-204ENST00000525428 BZW2Q9Y6E2 419 aaKnown RBP12.07□□□□□ -0.48
CLNS1A-204ENST00000525428 PNPLA7Q6ZV29 1317 aa12.07□□□□□ -0.48
CLNS1A-204ENST00000525428 SIGLEC16A6NMB1 481 aa12.07□□□□□ -0.48
CLNS1A-204ENST00000525428 ZBTB48P10074 688 aaPredicted RBP12.07□□□□□ -0.48
CLNS1A-204ENST00000525428 SLC9A1P19634 815 aa12.07□□□□□ -0.48
CLNS1A-204ENST00000525428 AMPD3Q01432 767 aa12.07□□□□□ -0.48
CLNS1A-204ENST00000525428 RNF43Q68DV7 783 aa12.07□□□□□ -0.48
CLNS1A-204ENST00000525428 RASGEF1CQ8N431 466 aa12.07□□□□□ -0.48
CLNS1A-204ENST00000525428 DDX27Q96GQ7 796 aaKnown RBP12.07□□□□□ -0.48
CLNS1A-204ENST00000525428 C7orf25Q9BPX7 421 aa12.07□□□□□ -0.48
CLNS1A-204ENST00000525428 MMTAG2Q9BU76 263 aaKnown RBP12.07□□□□□ -0.48
CLNS1A-204ENST00000525428 NYXQ9GZU5 481 aa12.07□□□□□ -0.48
CLNS1A-204ENST00000525428 GRHL1Q9NZI5 618 aa12.07□□□□□ -0.48
CLNS1A-204ENST00000525428 ANAPC4Q9UJX5 808 aa12.07□□□□□ -0.48
CLNS1A-204ENST00000525428 COL4A3BPQ9Y5P4 624 aa12.07□□□□□ -0.48
CLNS1A-204ENST00000525428 RIC1Q4ADV7 1423 aa12.07□□□□□ -0.48
CLNS1A-204ENST00000525428 ANKRD63C9JTQ0 380 aa12.06□□□□□ -0.48
CLNS1A-204ENST00000525428 CCNT1O60563 726 aaKnown RBP12.06□□□□□ -0.48
CLNS1A-204ENST00000525428 TBX10O75333 385 aa12.06□□□□□ -0.48
CLNS1A-204ENST00000525428 KCNJ1P48048 391 aa12.06□□□□□ -0.48
CLNS1A-204ENST00000525428 POLGP54098 1239 aaPredicted RBP12.06□□□□□ -0.48
CLNS1A-204ENST00000525428 RTP1P59025 263 aa12.06□□□□□ -0.48
CLNS1A-204ENST00000525428 MTFR1Q15390 333 aa12.06□□□□□ -0.48
CLNS1A-204ENST00000525428 Q4G0T1 1027 aa12.06□□□□□ -0.48
CLNS1A-204ENST00000525428 TAF1BQ53T94 588 aaPredicted RBP12.06□□□□□ -0.48
CLNS1A-204ENST00000525428 LRRC74BQ6ZQY2 392 aa12.06□□□□□ -0.48
CLNS1A-204ENST00000525428 SPATA5Q8NB90 893 aa12.06□□□□□ -0.48
CLNS1A-204ENST00000525428 PPFIBP2Q8ND30 876 aa12.06□□□□□ -0.48
CLNS1A-204ENST00000525428 NMD3Q96D46 503 aaKnown RBP12.06□□□□□ -0.48
CLNS1A-204ENST00000525428 TUBGCP5Q96RT8 1024 aa12.06□□□□□ -0.48
CLNS1A-204ENST00000525428 TSG101Q99816 390 aa12.06□□□□□ -0.48
CLNS1A-204ENST00000525428 TIPINQ9BVW5 301 aa12.06□□□□□ -0.48
CLNS1A-204ENST00000525428 ADAM33Q9BZ11 813 aa12.06□□□□□ -0.48
CLNS1A-204ENST00000525428 TSPYL2Q9H2G4 693 aaPredicted RBP12.06□□□□□ -0.48
CLNS1A-204ENST00000525428 NKIRAS1Q9NYS0 192 aa12.06□□□□□ -0.48
CLNS1A-204ENST00000525428 MINPP1Q9UNW1 487 aa12.06□□□□□ -0.48
CLNS1A-204ENST00000525428 POLRMTO00411 1230 aaKnown RBP12.06□□□□□ -0.48
CLNS1A-204ENST00000525428 H2AFZP0C0S5 128 aa12.06□□□□□ -0.48
CLNS1A-204ENST00000525428 MARK3P27448 753 aa12.06□□□□□ -0.48
CLNS1A-204ENST00000525428 MAPK7Q13164 816 aa12.06□□□□□ -0.48
CLNS1A-204ENST00000525428 MPP3Q13368 585 aa12.06□□□□□ -0.48
CLNS1A-204ENST00000525428 SF3B3Q15393 1217 aaKnown RBP12.06□□□□□ -0.48
CLNS1A-204ENST00000525428 CFAP157Q5JU67 520 aa12.06□□□□□ -0.48
CLNS1A-204ENST00000525428 RBM26Q5T8P6 1007 aaKnown RBP12.06□□□□□ -0.48
CLNS1A-204ENST00000525428 H2AFVQ71UI9 128 aa12.06□□□□□ -0.48
CLNS1A-204ENST00000525428 SV2BQ7L1I2 683 aa12.06□□□□□ -0.48
CLNS1A-204ENST00000525428 TXNRD3Q86VQ6 643 aa12.06□□□□□ -0.48
CLNS1A-204ENST00000525428 HOMEZQ8IX15 550 aa12.06□□□□□ -0.48
CLNS1A-204ENST00000525428 KBTBD2Q8IY47 623 aa12.06□□□□□ -0.48
CLNS1A-204ENST00000525428 CYP4X1Q8N118 509 aa12.06□□□□□ -0.48
CLNS1A-204ENST00000525428 ARL10Q8N8L6 244 aa12.06□□□□□ -0.48
CLNS1A-204ENST00000525428 MIPOL1Q8TD10 442 aa12.06□□□□□ -0.48
CLNS1A-204ENST00000525428 UIMC1Q96RL1 719 aa12.06□□□□□ -0.48
CLNS1A-204ENST00000525428 LRP2BPQ9P2M1 347 aa12.06□□□□□ -0.48
CLNS1A-204ENST00000525428 SUCLA2Q9P2R7 463 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms