RNA–Protein interactions for RNA: ENST00000525315.5

CTSB-209, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-209ENST00000525315 IBSPP21815 317 aaPredicted RBP14.3□□□□□ -0.12
CTSB-209ENST00000525315 NPTX2P47972 431 aa14.3□□□□□ -0.12
CTSB-209ENST00000525315 EFNA5P52803 228 aa14.3□□□□□ -0.12
CTSB-209ENST00000525315 PEX3P56589 373 aa14.3□□□□□ -0.12
CTSB-209ENST00000525315 MCM6Q14566 821 aa14.3□□□□□ -0.12
CTSB-209ENST00000525315 FOXD4L6Q3SYB3 417 aaPredicted RBP14.3□□□□□ -0.12
CTSB-209ENST00000525315 PAN2Q504Q3 1202 aaKnown RBP14.3□□□□□ -0.12
CTSB-209ENST00000525315 CLLU1OSQ5K130 101 aa14.3□□□□□ -0.12
CTSB-209ENST00000525315 RRAGBQ5VZM2 374 aa14.3□□□□□ -0.12
CTSB-209ENST00000525315 NOTUMQ6P988 496 aa14.3□□□□□ -0.12
CTSB-209ENST00000525315 FOXD4L3Q6VB84 417 aaPredicted RBP14.3□□□□□ -0.12
CTSB-209ENST00000525315 FBXO22Q8NEZ5 403 aa14.3□□□□□ -0.12
CTSB-209ENST00000525315 DEPTORQ8TB45 409 aa14.3□□□□□ -0.12
CTSB-209ENST00000525315 LARP4BQ92615 738 aaKnown RBP14.3□□□□□ -0.12
CTSB-209ENST00000525315 CPB2Q96IY4 423 aa14.3□□□□□ -0.12
CTSB-209ENST00000525315 TMEM134Q9H6X4 195 aa14.3□□□□□ -0.12
CTSB-209ENST00000525315 CWH43Q9H720 699 aa14.3□□□□□ -0.12
CTSB-209ENST00000525315 TYW1Q9NV66 732 aaKnown RBP14.3□□□□□ -0.12
CTSB-209ENST00000525315 LMCD1Q9NZU5 365 aa14.3□□□□□ -0.12
CTSB-209ENST00000525315 DAXXQ9UER7 740 aaPredicted RBP14.3□□□□□ -0.12
CTSB-209ENST00000525315 MTUS1Q9ULD2 1270 aa14.3□□□□□ -0.12
CTSB-209ENST00000525315 TDRD15B5MCY1 1934 aaKnown RBP14.29□□□□□ -0.12
CTSB-209ENST00000525315 ATG2AQ2TAZ0 1938 aa14.29□□□□□ -0.12
CTSB-209ENST00000525315 TRIP11Q15643 1979 aa14.29□□□□□ -0.12
CTSB-209ENST00000525315 NPHP3-ACAD11A0A0J9YXS1 232 aa14.29□□□□□ -0.12
CTSB-209ENST00000525315 ACKR2O00590 384 aa14.29□□□□□ -0.12
CTSB-209ENST00000525315 B4GALT5O43286 388 aa14.29□□□□□ -0.12
CTSB-209ENST00000525315 CUTAO60888 179 aa14.29□□□□□ -0.12
CTSB-209ENST00000525315 NCLP19338 710 aaKnown RBP14.29□□□□□ -0.12
CTSB-209ENST00000525315 GIT2Q14161 759 aa14.29□□□□□ -0.12
CTSB-209ENST00000525315 MAPK6Q16659 721 aa14.29□□□□□ -0.12
CTSB-209ENST00000525315 NAALADL2Q58DX5 795 aa14.29□□□□□ -0.12
CTSB-209ENST00000525315 AXDND1Q5T1B0 1012 aaPredicted RBP14.29□□□□□ -0.12
CTSB-209ENST00000525315 LRRC55Q6ZSA7 311 aa14.29□□□□□ -0.12
CTSB-209ENST00000525315 GPBP1Q86WP2 473 aa14.29□□□□□ -0.12
CTSB-209ENST00000525315 SMG8Q8ND04 991 aaKnown RBP14.29□□□□□ -0.12
CTSB-209ENST00000525315 CNNM3Q8NE01 707 aa14.29□□□□□ -0.12
CTSB-209ENST00000525315 RASSF8Q8NHQ8 419 aa14.29□□□□□ -0.12
CTSB-209ENST00000525315 KCNG4Q8TDN1 519 aa14.29□□□□□ -0.12
CTSB-209ENST00000525315 SPIRE2Q8WWL2 714 aa14.29□□□□□ -0.12
CTSB-209ENST00000525315 RSPH1Q8WYR4 309 aa14.29□□□□□ -0.12
CTSB-209ENST00000525315 PGBD4Q96DM1 585 aa14.29□□□□□ -0.12
CTSB-209ENST00000525315 PLVAPQ9BX97 442 aa14.29□□□□□ -0.12
CTSB-209ENST00000525315 EIF2AQ9BY44 585 aaKnown RBP14.29□□□□□ -0.12
CTSB-209ENST00000525315 STK17AQ9UEE5 414 aa14.29□□□□□ -0.12
CTSB-209ENST00000525315 ODF2LQ9ULJ1 636 aa14.29□□□□□ -0.12
CTSB-209ENST00000525315 RBM19Q9Y4C8 960 aaKnown RBP14.29□□□□□ -0.12
CTSB-209ENST00000525315 MTCH2Q9Y6C9 303 aa14.29□□□□□ -0.12
CTSB-209ENST00000525315 PLXNA4Q9HCM2 1894 aa14.29□□□□□ -0.12
CTSB-209ENST00000525315 A0A087X0B3 334 aa14.28□□□□□ -0.12
CTSB-209ENST00000525315 TTLL13PA6NNM8 815 aa14.28□□□□□ -0.12
CTSB-209ENST00000525315 CCDC169A6NNP5 214 aa14.28□□□□□ -0.12
CTSB-209ENST00000525315 MEIS3P2A8K0S8 358 aa14.28□□□□□ -0.12
CTSB-209ENST00000525315 K7ERI5 159 aa14.28□□□□□ -0.12
CTSB-209ENST00000525315 OFD1O75665 1012 aa14.28□□□□□ -0.12
CTSB-209ENST00000525315 PRKCBP05771 671 aa14.28□□□□□ -0.12
CTSB-209ENST00000525315 PLS3P13797 630 aa14.28□□□□□ -0.12
CTSB-209ENST00000525315 IGFBP4P22692 258 aa14.28□□□□□ -0.12
CTSB-209ENST00000525315 TXLNAP40222 546 aa14.28□□□□□ -0.12
CTSB-209ENST00000525315 RAD51AP2Q09MP3 1159 aa14.28□□□□□ -0.12
CTSB-209ENST00000525315 DMP1Q13316 513 aaPredicted RBP14.28□□□□□ -0.12
CTSB-209ENST00000525315 GPM6BQ13491 265 aa14.28□□□□□ -0.12
CTSB-209ENST00000525315 DHX8Q14562 1220 aaKnown RBP14.28□□□□□ -0.12
CTSB-209ENST00000525315 SLC27A1Q6PCB7 646 aa14.28□□□□□ -0.12
CTSB-209ENST00000525315 AGMOQ6ZNB7 445 aa14.28□□□□□ -0.12
CTSB-209ENST00000525315 CCDC73Q6ZRK6 1079 aa14.28□□□□□ -0.12
CTSB-209ENST00000525315 RNF169Q8NCN4 708 aa14.28□□□□□ -0.12
CTSB-209ENST00000525315 HELQQ8TDG4 1101 aa14.28□□□□□ -0.12
CTSB-209ENST00000525315 KCNN1Q92952 543 aa14.28□□□□□ -0.12
CTSB-209ENST00000525315 LPPQ93052 612 aa14.28□□□□□ -0.12
CTSB-209ENST00000525315 P2RX5Q93086 422 aa14.28□□□□□ -0.12
CTSB-209ENST00000525315 KIFC3Q9BVG8 833 aa14.28□□□□□ -0.12
CTSB-209ENST00000525315 KMT5AQ9NQR1 393 aa14.28□□□□□ -0.12
CTSB-209ENST00000525315 ARHGAP28Q9P2N2 729 aa14.28□□□□□ -0.12
CTSB-209ENST00000525315 PCDHA7Q9UN72 937 aa14.28□□□□□ -0.12
CTSB-209ENST00000525315 MYO7AQ13402 2215 aa14.27□□□□□ -0.12
CTSB-209ENST00000525315 CNTNAP2Q9UHC6 1331 aa14.27□□□□□ -0.12
CTSB-209ENST00000525315 EDN1P05305 212 aa14.27□□□□□ -0.13
CTSB-209ENST00000525315 CTNNB1P35222 781 aa14.27□□□□□ -0.13
CTSB-209ENST00000525315 ZNF131P52739 623 aa14.27□□□□□ -0.13
CTSB-209ENST00000525315 PRPF4BQ13523 1007 aaKnown RBP14.27□□□□□ -0.13
CTSB-209ENST00000525315 NT5DC1Q5TFE4 455 aa14.27□□□□□ -0.13
CTSB-209ENST00000525315 SHC4Q6S5L8 630 aa14.27□□□□□ -0.13
CTSB-209ENST00000525315 SV2BQ7L1I2 683 aa14.27□□□□□ -0.13
CTSB-209ENST00000525315 TAS1R3Q7RTX0 852 aa14.27□□□□□ -0.13
CTSB-209ENST00000525315 ABI1Q8IZP0 508 aa14.27□□□□□ -0.13
CTSB-209ENST00000525315 MAFAQ8NHW3 353 aaPredicted RBP14.27□□□□□ -0.13
CTSB-209ENST00000525315 GDPD5Q8WTR4 605 aa14.27□□□□□ -0.13
CTSB-209ENST00000525315 REEP2Q9BRK0 252 aa14.27□□□□□ -0.13
CTSB-209ENST00000525315 PANK2Q9BZ23 570 aa14.27□□□□□ -0.13
CTSB-209ENST00000525315 UBN1Q9NPG3 1134 aa14.27□□□□□ -0.13
CTSB-209ENST00000525315 LARSQ9P2J5 1176 aaKnown RBP14.27□□□□□ -0.13
CTSB-209ENST00000525315 IPPQ9Y573 584 aa14.27□□□□□ -0.13
CTSB-209ENST00000525315 ATP6V1DQ9Y5K8 247 aa14.27□□□□□ -0.13
CTSB-209ENST00000525315 PRUNE2Q8WUY3 3088 aa14.27□□□□□ -0.13
CTSB-209ENST00000525315 SPTBN5Q9NRC6 3674 aaKnown RBP14.26□□□□□ -0.13
CTSB-209ENST00000525315 PHLPP2Q6ZVD8 1323 aa14.26□□□□□ -0.13
CTSB-209ENST00000525315 N4BP3O15049 544 aa14.26□□□□□ -0.13
CTSB-209ENST00000525315 INPPL1O15357 1258 aa14.26□□□□□ -0.13
CTSB-209ENST00000525315 SLC16A4O15374 487 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms