RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 PRR23AA6NEV1 266 aa10.72□□□□□ -0.69
TRAPPC4-206ENST00000525303 ZNF623O75123 536 aa10.72□□□□□ -0.69
TRAPPC4-206ENST00000525303 DDHD2O94830 711 aa10.72□□□□□ -0.69
TRAPPC4-206ENST00000525303 SSBP05455 408 aaKnown RBP eCLIP10.72□□□□□ -0.69
TRAPPC4-206ENST00000525303 KLRC2P26717 231 aa10.72□□□□□ -0.69
TRAPPC4-206ENST00000525303 PDIA3P30101 505 aaKnown RBP10.72□□□□□ -0.69
TRAPPC4-206ENST00000525303 NBL1P41271 181 aa10.72□□□□□ -0.69
TRAPPC4-206ENST00000525303 NEK4P51957 841 aa10.72□□□□□ -0.69
TRAPPC4-206ENST00000525303 PLA2G4FQ68DD2 849 aa10.72□□□□□ -0.69
TRAPPC4-206ENST00000525303 ANO5Q75V66 913 aa10.72□□□□□ -0.69
TRAPPC4-206ENST00000525303 GPR149Q86SP6 731 aa10.72□□□□□ -0.69
TRAPPC4-206ENST00000525303 PPFIBP1Q86W92 1011 aa10.72□□□□□ -0.69
TRAPPC4-206ENST00000525303 FLCNQ8NFG4 579 aa10.72□□□□□ -0.69
TRAPPC4-206ENST00000525303 ETNPPLQ8TBG4 499 aa10.72□□□□□ -0.69
TRAPPC4-206ENST00000525303 URGCPQ8TCY9 931 aa10.72□□□□□ -0.69
TRAPPC4-206ENST00000525303 ACSF2Q96CM8 615 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC4-206ENST00000525303 PGBD4Q96DM1 585 aa10.72□□□□□ -0.69
TRAPPC4-206ENST00000525303 KLHL5Q96PQ7 755 aa10.72□□□□□ -0.69
TRAPPC4-206ENST00000525303 SFXN1Q9H9B4 322 aa10.72□□□□□ -0.69
TRAPPC4-206ENST00000525303 IFT122Q9HBG6 1241 aa10.72□□□□□ -0.69
TRAPPC4-206ENST00000525303 AGPAT5Q9NUQ2 364 aa10.72□□□□□ -0.69
TRAPPC4-206ENST00000525303 PCDHA4Q9UN74 947 aa10.72□□□□□ -0.69
TRAPPC4-206ENST00000525303 PCDHB2Q9Y5E7 798 aa10.72□□□□□ -0.69
TRAPPC4-206ENST00000525303 CACNA1IQ9P0X4 2223 aa10.72□□□□□ -0.69
TRAPPC4-206ENST00000525303 CYP3A7-CYP3A51PA0A087WV96 503 aa10.71□□□□□ -0.69
TRAPPC4-206ENST00000525303 VWA8A3KMH1 1905 aa10.71□□□□□ -0.69
TRAPPC4-206ENST00000525303 CNPP09543 421 aaKnown RBP10.71□□□□□ -0.69
TRAPPC4-206ENST00000525303 CYP3A7P24462 503 aa10.71□□□□□ -0.69
TRAPPC4-206ENST00000525303 MCM2P49736 904 aa10.71□□□□□ -0.69
TRAPPC4-206ENST00000525303 CLCN4P51793 760 aa10.71□□□□□ -0.69
TRAPPC4-206ENST00000525303 CLCN5P51795 746 aa10.71□□□□□ -0.69
TRAPPC4-206ENST00000525303 AFF1P51825 1210 aaKnown RBP10.71□□□□□ -0.69
TRAPPC4-206ENST00000525303 EVCP57679 992 aa10.71□□□□□ -0.69
TRAPPC4-206ENST00000525303 PSMC5P62195 406 aa10.71□□□□□ -0.69
TRAPPC4-206ENST00000525303 EP300Q09472 2414 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC4-206ENST00000525303 CWF19L1Q69YN2 538 aaKnown RBP10.71□□□□□ -0.69
TRAPPC4-206ENST00000525303 AGMOQ6ZNB7 445 aa10.71□□□□□ -0.69
TRAPPC4-206ENST00000525303 CCDC149Q6ZUS6 474 aa10.71□□□□□ -0.69
TRAPPC4-206ENST00000525303 OTOP3Q7RTS5 596 aa10.71□□□□□ -0.69
TRAPPC4-206ENST00000525303 FRMD5Q7Z6J6 570 aa10.71□□□□□ -0.69
TRAPPC4-206ENST00000525303 TRIM22Q8IYM9 498 aa10.71□□□□□ -0.69
TRAPPC4-206ENST00000525303 BLIDQ8IZY5 108 aa10.71□□□□□ -0.69
TRAPPC4-206ENST00000525303 ZNF274Q96GC6 653 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC4-206ENST00000525303 JPH2Q9BR39 696 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC4-206ENST00000525303 EMILIN2Q9BXX0 1053 aa10.71□□□□□ -0.69
TRAPPC4-206ENST00000525303 RSAD1Q9HA92 442 aa10.71□□□□□ -0.69
TRAPPC4-206ENST00000525303 DDX25Q9UHL0 483 aaKnown RBP10.71□□□□□ -0.69
TRAPPC4-206ENST00000525303 DMXL1Q9Y485 3027 aa10.71□□□□□ -0.69
TRAPPC4-206ENST00000525303 COL4A3BPQ9Y5P4 624 aa10.71□□□□□ -0.69
TRAPPC4-206ENST00000525303 FRYLO94915 3013 aa10.7□□□□□ -0.7
TRAPPC4-206ENST00000525303 M0R2N6 131 aa10.7□□□□□ -0.7
TRAPPC4-206ENST00000525303 EML1O00423 815 aa10.7□□□□□ -0.7
TRAPPC4-206ENST00000525303 C2CD2LO14523 706 aa10.7□□□□□ -0.7
TRAPPC4-206ENST00000525303 NRP1O14786 923 aa10.7□□□□□ -0.7
TRAPPC4-206ENST00000525303 SLC37A4O43826 429 aa10.7□□□□□ -0.7
TRAPPC4-206ENST00000525303 LILRB3O75022 631 aa10.7□□□□□ -0.7
TRAPPC4-206ENST00000525303 ABCB7O75027 752 aa10.7□□□□□ -0.7
TRAPPC4-206ENST00000525303 POMCP01189 267 aa10.7□□□□□ -0.7
TRAPPC4-206ENST00000525303 ALDH2P05091 517 aa10.7□□□□□ -0.7
TRAPPC4-206ENST00000525303 SRGAP2CP0DJJ0 459 aa10.7□□□□□ -0.7
TRAPPC4-206ENST00000525303 NPEPPSP55786 919 aa10.7□□□□□ -0.7
TRAPPC4-206ENST00000525303 SSRP1Q08945 709 aaKnown RBP10.7□□□□□ -0.7
TRAPPC4-206ENST00000525303 TDGQ13569 410 aa10.7□□□□□ -0.7
TRAPPC4-206ENST00000525303 INF2Q27J81 1249 aa10.7□□□□□ -0.7
TRAPPC4-206ENST00000525303 LETM2Q2VYF4 491 aa10.7□□□□□ -0.7
TRAPPC4-206ENST00000525303 CPLX2Q6PUV4 134 aaKnown RBP10.7□□□□□ -0.7
TRAPPC4-206ENST00000525303 MOXD1Q6UVY6 613 aa10.7□□□□□ -0.7
TRAPPC4-206ENST00000525303 MRPL10Q7Z7H8 261 aaKnown RBP10.7□□□□□ -0.7
TRAPPC4-206ENST00000525303 ZNF579Q8NAF0 562 aaKnown RBP10.7□□□□□ -0.7
TRAPPC4-206ENST00000525303 SLC7A3Q8WY07 619 aa10.7□□□□□ -0.7
TRAPPC4-206ENST00000525303 MBOAT7Q96N66 472 aa10.7□□□□□ -0.7
TRAPPC4-206ENST00000525303 FAM193BQ96PV7 902 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC4-206ENST00000525303 TMEM175Q9BSA9 504 aa10.7□□□□□ -0.7
TRAPPC4-206ENST00000525303 MINDY3Q9H8M7 445 aa10.7□□□□□ -0.7
TRAPPC4-206ENST00000525303 KCNK12Q9HB15 430 aa10.7□□□□□ -0.7
TRAPPC4-206ENST00000525303 MRPL17Q9NRX2 175 aaKnown RBP10.7□□□□□ -0.7
TRAPPC4-206ENST00000525303 BMP2KQ9NSY1 1161 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC4-206ENST00000525303 STK39Q9UEW8 545 aa10.7□□□□□ -0.7
TRAPPC4-206ENST00000525303 FAN1Q9Y2M0 1017 aa10.7□□□□□ -0.7
TRAPPC4-206ENST00000525303 DNAH14Q0VDD8 3507 aa10.7□□□□□ -0.7
TRAPPC4-206ENST00000525303 CNTNAP2Q9UHC6 1331 aa10.69□□□□□ -0.7
TRAPPC4-206ENST00000525303 PI15O43692 258 aa10.69□□□□□ -0.7
TRAPPC4-206ENST00000525303 DEXIO95424 95 aa10.69□□□□□ -0.7
TRAPPC4-206ENST00000525303 NPR3P17342 541 aa10.69□□□□□ -0.7
TRAPPC4-206ENST00000525303 AOC1P19801 751 aa10.69□□□□□ -0.7
TRAPPC4-206ENST00000525303 HOXA11P31270 313 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC4-206ENST00000525303 QARSP47897 775 aaKnown RBP10.69□□□□□ -0.7
TRAPPC4-206ENST00000525303 AK2P54819 239 aa10.69□□□□□ -0.7
TRAPPC4-206ENST00000525303 PPP2R5CQ13362 524 aa10.69□□□□□ -0.7
TRAPPC4-206ENST00000525303 TOB2Q14106 344 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC4-206ENST00000525303 NONOQ15233 471 aaKnown RBP eCLIP10.69□□□□□ -0.7
TRAPPC4-206ENST00000525303 NPY5RQ15761 445 aa10.69□□□□□ -0.7
TRAPPC4-206ENST00000525303 UBXN11Q5T124 520 aa10.69□□□□□ -0.7
TRAPPC4-206ENST00000525303 C15orf39Q6ZRI6 1047 aa10.69□□□□□ -0.7
TRAPPC4-206ENST00000525303 SRGAP1Q7Z6B7 1085 aa10.69□□□□□ -0.7
TRAPPC4-206ENST00000525303 DAGLBQ8NCG7 672 aa10.69□□□□□ -0.7
TRAPPC4-206ENST00000525303 PRPF31Q8WWY3 499 aaKnown RBP10.69□□□□□ -0.7
TRAPPC4-206ENST00000525303 NKD2Q969F2 451 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC4-206ENST00000525303 TMEM143Q96AN5 459 aa10.69□□□□□ -0.7
TRAPPC4-206ENST00000525303 CEP170P1Q96L14 293 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms