RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 BRIP1Q9BX63 1249 aa5□□□□□ -1.61
CD44-213ENST00000525209 OR10A4Q9H209 315 aa5□□□□□ -1.61
CD44-213ENST00000525209 NKX2-4Q9H2Z4 354 aa5□□□□□ -1.61
CD44-213ENST00000525209 RUBCNLQ9H714 662 aa5□□□□□ -1.61
CD44-213ENST00000525209 CCDC177Q9NQR7 707 aaPredicted RBP5□□□□□ -1.61
CD44-213ENST00000525209 KRT84Q9NSB2 600 aa5□□□□□ -1.61
CD44-213ENST00000525209 CPSF2Q9P2I0 782 aaKnown RBP5□□□□□ -1.61
CD44-213ENST00000525209 EIF2B4Q9UI10 523 aaKnown RBP5□□□□□ -1.61
CD44-213ENST00000525209 COG5Q9UP83 839 aa5□□□□□ -1.61
CD44-213ENST00000525209 TDRD9Q8NDG6 1382 aaKnown RBP5□□□□□ -1.61
CD44-213ENST00000525209 SYNJ2BP-COX16A0A087WUM0 186 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 CCDC196A0A1B0GTZ2 297 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 A0A1W2PPC4 97 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 FAM25EA8MYX2 175 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 NDC80O14777 642 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 KIF5CO60282 957 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 UBOX5O94941 541 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 SNRPB2P08579 225 aaKnown RBP4.99□□□□□ -1.61
CD44-213ENST00000525209 GSTP1P09211 210 aaKnown RBP4.99□□□□□ -1.61
CD44-213ENST00000525209 ZSCAN22P10073 491 aaPredicted RBP4.99□□□□□ -1.61
CD44-213ENST00000525209 CD247P20963 164 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 CHMP24386 653 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 EEF1GP26641 437 aaKnown RBP4.99□□□□□ -1.61
CD44-213ENST00000525209 ADH7P40394 386 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 IL12RB1P42701 662 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 MSH2P43246 934 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 ALDH3A2P51648 485 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 KCNQ4P56696 695 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 GPR85P60893 370 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 SMAD3P84022 425 aaKnown RBP4.99□□□□□ -1.61
CD44-213ENST00000525209 SRSF2Q01130 221 aaKnown RBP4.99□□□□□ -1.61
CD44-213ENST00000525209 CREMQ03060 361 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 COX10Q12887 443 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 DAG1Q14118 895 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 SEMA3AQ14563 771 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 SURF1Q15526 300 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 PRSS53Q2L4Q9 553 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 WDR44Q5JSH3 913 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 TANGO2Q6ICL3 276 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 DENND5AQ6IQ26 1287 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 CRTC1Q6UUV9 634 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 ZNF783Q6ZMS7 281 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 ZNF765Q7L2R6 523 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 CYFIP1Q7L576 1253 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 GALNT7Q86SF2 657 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 HERC6Q8IVU3 1022 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 UNC45BQ8IWX7 931 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 CCDC144CPQ8IYA2 1237 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 NUP93Q8N1F7 819 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 THEMISQ8N1K5 641 aaPredicted RBP4.99□□□□□ -1.61
CD44-213ENST00000525209 LRRC71Q8N4P6 559 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 CCDC33Q8N5R6 958 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 CEP70Q8NHQ1 597 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 PCDH19Q8TAB3 1148 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 GPBAR1Q8TDU6 330 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 BSNDQ8WZ55 320 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 ZUFSPQ96AP4 578 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 ACSF2Q96CM8 615 aaPredicted RBP4.99□□□□□ -1.61
CD44-213ENST00000525209 ACAP3Q96P50 834 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 KCNC2Q96PR1 638 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 PPP1R9BQ96SB3 815 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 PBX4Q9BYU1 374 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 ZCCHC2Q9C0B9 1178 aaKnown RBP4.99□□□□□ -1.61
CD44-213ENST00000525209 PAIP1Q9H074 479 aaKnown RBP4.99□□□□□ -1.61
CD44-213ENST00000525209 MS4A5Q9H3V2 200 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 PNPLA8Q9NP80 782 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 PICK1Q9NRD5 415 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 KCTD5Q9NXV2 234 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 ADD3Q9UEY8 706 aaKnown RBP4.99□□□□□ -1.61
CD44-213ENST00000525209 RASAL2Q9UJF2 1139 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 HIF3AQ9Y2N7 669 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 ATP23Q9Y6H3 246 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 NCAPD3P42695 1498 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 LAMC3Q9Y6N6 1575 aa4.99□□□□□ -1.61
CD44-213ENST00000525209 SMARCA4P51532 1647 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 A0A088AWK7 358 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 A0A1W2PNR3 127 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 CCDC69A6NI79 296 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 SPDYE3A6NKU9 549 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 BOLA2-SMG1P6H3BVE0 249 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 TRIM38O00635 465 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 IPO8O15397 1037 aaKnown RBP4.98□□□□□ -1.61
CD44-213ENST00000525209 APBB3O95704 486 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 SRGAP2CP0DJJ0 459 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 SFTPCP11686 197 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 ALAS1P13196 640 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 IL4RP24394 825 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 MSX1P28360 303 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 HADHAP40939 763 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 PRPHP41219 470 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 CD151P48509 253 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 CTCFP49711 727 aaPredicted RBP4.98□□□□□ -1.61
CD44-213ENST00000525209 CEBPAP49715 358 aaPredicted RBP4.98□□□□□ -1.61
CD44-213ENST00000525209 AFF3P51826 1226 aaKnown RBP4.98□□□□□ -1.61
CD44-213ENST00000525209 IRX3P78415 501 aaPredicted RBP4.98□□□□□ -1.61
CD44-213ENST00000525209 IL1RL1Q01638 556 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 PPARDQ03181 441 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 PLAURQ03405 335 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 TFCP2Q12800 502 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 PPA1Q15181 289 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms