RNA–Protein interactions for RNA: ENST00000525167.1

TSKU-202, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-202ENST00000525167 AUTS2Q8WXX7 1259 aa19.17■□□□□ 0.66
TSKU-202ENST00000525167 AIFM3Q96NN9 605 aa19.17■□□□□ 0.66
TSKU-202ENST00000525167 SLKQ9H2G2 1235 aaPredicted RBP19.17■□□□□ 0.66
TSKU-202ENST00000525167 RSAD1Q9HA92 442 aa19.17■□□□□ 0.66
TSKU-202ENST00000525167 UBN1Q9NPG3 1134 aa19.17■□□□□ 0.66
TSKU-202ENST00000525167 STK36Q9NRP7 1315 aa19.17■□□□□ 0.66
TSKU-202ENST00000525167 GALR2O43603 387 aaPredicted RBP19.16■□□□□ 0.66
TSKU-202ENST00000525167 NPEPPSP55786 919 aa19.16■□□□□ 0.66
TSKU-202ENST00000525167 LAMTOR4Q0VGL1 99 aa19.16■□□□□ 0.66
TSKU-202ENST00000525167 EPHA7Q15375 998 aa19.16■□□□□ 0.66
TSKU-202ENST00000525167 LONRF3Q496Y0 759 aa19.16■□□□□ 0.66
TSKU-202ENST00000525167 OTUD6AQ7L8S5 288 aa19.16■□□□□ 0.66
TSKU-202ENST00000525167 C12orf76Q8N812 135 aaPredicted RBP19.16■□□□□ 0.66
TSKU-202ENST00000525167 VN1R3Q9BXE9 311 aa19.16■□□□□ 0.66
TSKU-202ENST00000525167 GBP3Q9H0R5 595 aa19.16■□□□□ 0.66
TSKU-202ENST00000525167 PDGFBP01127 241 aaPredicted RBP19.15■□□□□ 0.66
TSKU-202ENST00000525167 ALDH2P05091 517 aa19.15■□□□□ 0.66
TSKU-202ENST00000525167 NCLP19338 710 aaKnown RBP19.15■□□□□ 0.66
TSKU-202ENST00000525167 HOXA11P31270 313 aaPredicted RBP19.15■□□□□ 0.66
TSKU-202ENST00000525167 YWHABP31946 246 aaKnown RBP19.15■□□□□ 0.66
TSKU-202ENST00000525167 STK3Q13188 491 aa19.15■□□□□ 0.66
TSKU-202ENST00000525167 C15orf39Q6ZRI6 1047 aa19.15■□□□□ 0.66
TSKU-202ENST00000525167 GPR149Q86SP6 731 aa19.15■□□□□ 0.66
TSKU-202ENST00000525167 ZNF280BQ86YH2 543 aa19.15■□□□□ 0.66
TSKU-202ENST00000525167 ATOH1Q92858 354 aaPredicted RBP19.15■□□□□ 0.66
TSKU-202ENST00000525167 ACSF2Q96CM8 615 aaPredicted RBP19.15■□□□□ 0.66
TSKU-202ENST00000525167 CCDC51Q96ER9 411 aa19.15■□□□□ 0.66
TSKU-202ENST00000525167 FAM193BQ96PV7 902 aaPredicted RBP19.15■□□□□ 0.66
TSKU-202ENST00000525167 LXNQ9BS40 222 aa19.15■□□□□ 0.66
TSKU-202ENST00000525167 MRPL17Q9NRX2 175 aaKnown RBP19.15■□□□□ 0.66
TSKU-202ENST00000525167 PDRG1Q9NUG6 133 aa19.15■□□□□ 0.66
TSKU-202ENST00000525167 KCNJ14Q9UNX9 436 aa19.15■□□□□ 0.66
TSKU-202ENST00000525167 SSX2IPQ9Y2D8 614 aa19.15■□□□□ 0.66
TSKU-202ENST00000525167 DENND4AQ7Z401 1863 aa19.15■□□□□ 0.66
TSKU-202ENST00000525167 INPPL1O15357 1258 aa19.14■□□□□ 0.65
TSKU-202ENST00000525167 B4GALT3O60512 393 aa19.14■□□□□ 0.65
TSKU-202ENST00000525167 CCNT1O60563 726 aaKnown RBP19.14■□□□□ 0.65
TSKU-202ENST00000525167 LILRB3O75022 631 aa19.14■□□□□ 0.65
TSKU-202ENST00000525167 WEE2P0C1S8 567 aa19.14■□□□□ 0.65
TSKU-202ENST00000525167 SRGAP2CP0DJJ0 459 aa19.14■□□□□ 0.65
TSKU-202ENST00000525167 KLRC2P26717 231 aa19.14■□□□□ 0.65
TSKU-202ENST00000525167 AXLP30530 894 aa19.14■□□□□ 0.65
TSKU-202ENST00000525167 CLCN4P51793 760 aa19.14■□□□□ 0.65
TSKU-202ENST00000525167 EMC2Q15006 297 aa19.14■□□□□ 0.65
TSKU-202ENST00000525167 UBXN11Q5T124 520 aa19.14■□□□□ 0.65
TSKU-202ENST00000525167 CCDC149Q6ZUS6 474 aa19.14■□□□□ 0.65
TSKU-202ENST00000525167 OTOP3Q7RTS5 596 aa19.14■□□□□ 0.65
TSKU-202ENST00000525167 FERMT3Q86UX7 667 aa19.14■□□□□ 0.65
TSKU-202ENST00000525167 SLFN12Q8IYM2 578 aa19.14■□□□□ 0.65
TSKU-202ENST00000525167 ZNF579Q8NAF0 562 aaKnown RBP19.14■□□□□ 0.65
TSKU-202ENST00000525167 HAS1Q92839 578 aa19.14■□□□□ 0.65
TSKU-202ENST00000525167 TMEM143Q96AN5 459 aa19.14■□□□□ 0.65
TSKU-202ENST00000525167 KLHL5Q96PQ7 755 aa19.14■□□□□ 0.65
TSKU-202ENST00000525167 ZSWIM4Q9H7M6 989 aa19.14■□□□□ 0.65
TSKU-202ENST00000525167 MINDY3Q9H8M7 445 aa19.14■□□□□ 0.65
TSKU-202ENST00000525167 WRAP73Q9P2S5 460 aaPredicted RBP19.14■□□□□ 0.65
TSKU-202ENST00000525167 LIMD1Q9UGP4 676 aa19.14■□□□□ 0.65
TSKU-202ENST00000525167 DPP7Q9UHL4 492 aa19.14■□□□□ 0.65
TSKU-202ENST00000525167 FAN1Q9Y2M0 1017 aa19.14■□□□□ 0.65
TSKU-202ENST00000525167 PROB1E7EW31 1015 aa19.13■□□□□ 0.65
TSKU-202ENST00000525167 MARCH6O60337 910 aa19.13■□□□□ 0.65
TSKU-202ENST00000525167 GFRA3O60609 400 aa19.13■□□□□ 0.65
TSKU-202ENST00000525167 DDHD2O94830 711 aa19.13■□□□□ 0.65
TSKU-202ENST00000525167 ERLIN2O94905 339 aa19.13■□□□□ 0.65
TSKU-202ENST00000525167 SOD2P04179 222 aa19.13■□□□□ 0.65
TSKU-202ENST00000525167 CNPP09543 421 aaKnown RBP19.13■□□□□ 0.65
TSKU-202ENST00000525167 POU5F1BQ06416 359 aa19.13■□□□□ 0.65
TSKU-202ENST00000525167 MXD4Q14582 209 aaPredicted RBP19.13■□□□□ 0.65
TSKU-202ENST00000525167 ELMSAN1Q6PJG2 1045 aa19.13■□□□□ 0.65
TSKU-202ENST00000525167 TMC5Q6UXY8 1006 aa19.13■□□□□ 0.65
TSKU-202ENST00000525167 CYP26C1Q6V0L0 522 aa19.13■□□□□ 0.65
TSKU-202ENST00000525167 RNF149Q8NC42 400 aa19.13■□□□□ 0.65
TSKU-202ENST00000525167 RHOBTB2Q9BYZ6 727 aa19.13■□□□□ 0.65
TSKU-202ENST00000525167 CACNA1HO95180 2353 aa19.13■□□□□ 0.65
TSKU-202ENST00000525167 SPDYE4A6NLX3 237 aa19.12■□□□□ 0.65
TSKU-202ENST00000525167 NRP1O14786 923 aa19.12■□□□□ 0.65
TSKU-202ENST00000525167 BAG4O95429 457 aaKnown RBP19.12■□□□□ 0.65
TSKU-202ENST00000525167 ASGR2P07307 311 aa19.12■□□□□ 0.65
TSKU-202ENST00000525167 CLCN5P51795 746 aa19.12■□□□□ 0.65
TSKU-202ENST00000525167 NCBP1Q09161 790 aaKnown RBP19.12■□□□□ 0.65
TSKU-202ENST00000525167 SCRN1Q12765 414 aa19.12■□□□□ 0.65
TSKU-202ENST00000525167 ASTLQ6HA08 431 aaPredicted RBP19.12■□□□□ 0.65
TSKU-202ENST00000525167 KANK3Q6NY19 840 aa19.12■□□□□ 0.65
TSKU-202ENST00000525167 NOTUMQ6P988 496 aa19.12■□□□□ 0.65
TSKU-202ENST00000525167 PIK3AP1Q6ZUJ8 805 aa19.12■□□□□ 0.65
TSKU-202ENST00000525167 IFNLR1Q8IU57 520 aaPredicted RBP19.12■□□□□ 0.65
TSKU-202ENST00000525167 CMASQ8NFW8 434 aaPredicted RBP19.12■□□□□ 0.65
TSKU-202ENST00000525167 MTRQ99707 1265 aa19.12■□□□□ 0.65
TSKU-202ENST00000525167 LARP6Q9BRS8 491 aaKnown RBP19.12■□□□□ 0.65
TSKU-202ENST00000525167 HERC2P3Q9BVR0 1158 aa19.12■□□□□ 0.65
TSKU-202ENST00000525167 C1RP00736 705 aa19.11■□□□□ 0.65
TSKU-202ENST00000525167 URODP06132 367 aa19.11■□□□□ 0.65
TSKU-202ENST00000525167 ADH1AP07327 375 aa19.11■□□□□ 0.65
TSKU-202ENST00000525167 ITGA4P13612 1032 aa19.11■□□□□ 0.65
TSKU-202ENST00000525167 AFF1P51825 1210 aaKnown RBP19.11■□□□□ 0.65
TSKU-202ENST00000525167 SPIRE1Q08AE8 756 aa19.11■□□□□ 0.65
TSKU-202ENST00000525167 XKR9Q5GH70 373 aa19.11■□□□□ 0.65
TSKU-202ENST00000525167 NCAPH2Q6IBW4 605 aa19.11■□□□□ 0.65
TSKU-202ENST00000525167 POTEDQ86YR6 584 aa19.11■□□□□ 0.65
TSKU-202ENST00000525167 TMEM105Q8N8V8 129 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms