RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 STK24Q9Y6E0 443 aa14.23□□□□□ -0.13
TRAPPC4-205ENST00000525079 H3BQ06 376 aaPredicted RBP14.22□□□□□ -0.13
TRAPPC4-205ENST00000525079 LINC01565O15544 149 aa14.22□□□□□ -0.13
TRAPPC4-205ENST00000525079 EYA4O95677 639 aa14.22□□□□□ -0.13
TRAPPC4-205ENST00000525079 ITGA4P13612 1032 aa14.22□□□□□ -0.13
TRAPPC4-205ENST00000525079 PDCP20941 246 aa14.22□□□□□ -0.13
TRAPPC4-205ENST00000525079 SYT1P21579 422 aa14.22□□□□□ -0.13
TRAPPC4-205ENST00000525079 AFF1P51825 1210 aaKnown RBP14.22□□□□□ -0.13
TRAPPC4-205ENST00000525079 BCAR1P56945 870 aa14.22□□□□□ -0.13
TRAPPC4-205ENST00000525079 SF3A1Q15459 793 aaKnown RBP14.22□□□□□ -0.13
TRAPPC4-205ENST00000525079 FAM173BQ6P4H8 233 aa14.22□□□□□ -0.13
TRAPPC4-205ENST00000525079 NOTUMQ6P988 496 aa14.22□□□□□ -0.13
TRAPPC4-205ENST00000525079 BRAPQ7Z569 592 aa14.22□□□□□ -0.13
TRAPPC4-205ENST00000525079 ZBTB8OSQ8IWT0 167 aa14.22□□□□□ -0.13
TRAPPC4-205ENST00000525079 PNMA5Q96PV4 448 aa14.22□□□□□ -0.13
TRAPPC4-205ENST00000525079 KIFC3Q9BVG8 833 aa14.22□□□□□ -0.13
TRAPPC4-205ENST00000525079 APOL6Q9BWW8 343 aa14.22□□□□□ -0.13
TRAPPC4-205ENST00000525079 MRPL9Q9BYD2 267 aaKnown RBP14.22□□□□□ -0.13
TRAPPC4-205ENST00000525079 NFKBIZQ9BYH8 718 aa14.22□□□□□ -0.13
TRAPPC4-205ENST00000525079 CSRNP2Q9H175 543 aa14.22□□□□□ -0.13
TRAPPC4-205ENST00000525079 RNF39Q9H2S5 420 aa14.22□□□□□ -0.13
TRAPPC4-205ENST00000525079 RSAD1Q9HA92 442 aa14.22□□□□□ -0.13
TRAPPC4-205ENST00000525079 TBC1D13Q9NVG8 400 aa14.22□□□□□ -0.13
TRAPPC4-205ENST00000525079 SPG21Q9NZD8 308 aa14.22□□□□□ -0.13
TRAPPC4-205ENST00000525079 IPPQ9Y573 584 aa14.22□□□□□ -0.13
TRAPPC4-205ENST00000525079 MYO7AQ13402 2215 aa14.21□□□□□ -0.13
TRAPPC4-205ENST00000525079 TTLL13PA6NNM8 815 aa14.21□□□□□ -0.13
TRAPPC4-205ENST00000525079 ZC3H11AO75152 810 aaKnown RBP eCLIP14.21□□□□□ -0.13
TRAPPC4-205ENST00000525079 NPTXRO95502 500 aa14.21□□□□□ -0.13
TRAPPC4-205ENST00000525079 SSBP05455 408 aaKnown RBP eCLIP14.21□□□□□ -0.13
TRAPPC4-205ENST00000525079 NCLP19338 710 aaKnown RBP14.21□□□□□ -0.13
TRAPPC4-205ENST00000525079 NRIP1P48552 1158 aa14.21□□□□□ -0.13
TRAPPC4-205ENST00000525079 GRIN1Q05586 938 aa14.21□□□□□ -0.13
TRAPPC4-205ENST00000525079 RNASELQ05823 741 aaKnown RBP14.21□□□□□ -0.13
TRAPPC4-205ENST00000525079 PCBP1Q15365 356 aaKnown RBP eCLIP14.21□□□□□ -0.13
TRAPPC4-205ENST00000525079 CSPP1Q1MSJ5 1256 aa14.21□□□□□ -0.13
TRAPPC4-205ENST00000525079 ARL6IP4Q66PJ3 421 aaKnown RBP14.21□□□□□ -0.13
TRAPPC4-205ENST00000525079 ZNF280BQ86YH2 543 aa14.21□□□□□ -0.13
TRAPPC4-205ENST00000525079 SLC39A11Q8N1S5 342 aa14.21□□□□□ -0.13
TRAPPC4-205ENST00000525079 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.21□□□□□ -0.13
TRAPPC4-205ENST00000525079 DEPTORQ8TB45 409 aa14.21□□□□□ -0.13
TRAPPC4-205ENST00000525079 MRPS27Q92552 414 aaKnown RBP14.21□□□□□ -0.13
TRAPPC4-205ENST00000525079 PABPC5Q96DU9 382 aaKnown RBP14.21□□□□□ -0.13
TRAPPC4-205ENST00000525079 INTS4Q96HW7 963 aaKnown RBP14.21□□□□□ -0.13
TRAPPC4-205ENST00000525079 UHRF1Q96T88 793 aaPredicted RBP14.21□□□□□ -0.13
TRAPPC4-205ENST00000525079 RUSC1Q9BVN2 902 aa14.21□□□□□ -0.13
TRAPPC4-205ENST00000525079 NRDE2Q9H7Z3 1164 aa14.21□□□□□ -0.13
TRAPPC4-205ENST00000525079 TLR9Q9NR96 1032 aa14.21□□□□□ -0.13
TRAPPC4-205ENST00000525079 DNAJB4Q9UDY4 337 aa14.21□□□□□ -0.13
TRAPPC4-205ENST00000525079 PER2O15055 1255 aa14.2□□□□□ -0.14
TRAPPC4-205ENST00000525079 B4GALT3O60512 393 aa14.2□□□□□ -0.14
TRAPPC4-205ENST00000525079 DDHD2O94830 711 aa14.2□□□□□ -0.14
TRAPPC4-205ENST00000525079 POMCP01189 267 aa14.2□□□□□ -0.14
TRAPPC4-205ENST00000525079 NAMPTP43490 491 aa14.2□□□□□ -0.14
TRAPPC4-205ENST00000525079 ALDH7A1P49419 539 aaKnown RBP14.2□□□□□ -0.14
TRAPPC4-205ENST00000525079 PLCB3Q01970 1234 aa14.2□□□□□ -0.14
TRAPPC4-205ENST00000525079 KRT17Q04695 432 aa14.2□□□□□ -0.14
TRAPPC4-205ENST00000525079 UBE3AQ05086 875 aa14.2□□□□□ -0.14
TRAPPC4-205ENST00000525079 DLX2Q07687 328 aaPredicted RBP14.2□□□□□ -0.14
TRAPPC4-205ENST00000525079 RESTQ13127 1097 aa14.2□□□□□ -0.14
TRAPPC4-205ENST00000525079 CLUL1Q15846 466 aa14.2□□□□□ -0.14
TRAPPC4-205ENST00000525079 TMEM132AQ24JP5 1023 aa14.2□□□□□ -0.14
TRAPPC4-205ENST00000525079 LEXMQ3ZCV2 418 aa14.2□□□□□ -0.14
TRAPPC4-205ENST00000525079 PLPP4Q5VZY2 271 aa14.2□□□□□ -0.14
TRAPPC4-205ENST00000525079 CDCA2Q69YH5 1023 aaPredicted RBP14.2□□□□□ -0.14
TRAPPC4-205ENST00000525079 RINT1Q6NUQ1 792 aa14.2□□□□□ -0.14
TRAPPC4-205ENST00000525079 CABP7Q86V35 215 aa14.2□□□□□ -0.14
TRAPPC4-205ENST00000525079 CNNM3Q8NE01 707 aa14.2□□□□□ -0.14
TRAPPC4-205ENST00000525079 URGCPQ8TCY9 931 aa14.2□□□□□ -0.14
TRAPPC4-205ENST00000525079 CCDC51Q96ER9 411 aa14.2□□□□□ -0.14
TRAPPC4-205ENST00000525079 CDK5RAP3Q96JB5 506 aa14.2□□□□□ -0.14
TRAPPC4-205ENST00000525079 IFT74Q96LB3 600 aa14.2□□□□□ -0.14
TRAPPC4-205ENST00000525079 TRIM6Q9C030 488 aaPredicted RBP14.2□□□□□ -0.14
TRAPPC4-205ENST00000525079 FZD8Q9H461 694 aa14.2□□□□□ -0.14
TRAPPC4-205ENST00000525079 NXF3Q9H4D5 531 aaKnown RBP14.2□□□□□ -0.14
TRAPPC4-205ENST00000525079 TLE6Q9H808 572 aa14.2□□□□□ -0.14
TRAPPC4-205ENST00000525079 PRMT7Q9NVM4 692 aaPredicted RBP14.2□□□□□ -0.14
TRAPPC4-205ENST00000525079 PUF60Q9UHX1 559 aaKnown RBP14.2□□□□□ -0.14
TRAPPC4-205ENST00000525079 CLIC4Q9Y696 253 aa14.2□□□□□ -0.14
TRAPPC4-205ENST00000525079 A0A1B0GUA9 196 aa14.19□□□□□ -0.14
TRAPPC4-205ENST00000525079 CCDC169A6NNP5 214 aa14.19□□□□□ -0.14
TRAPPC4-205ENST00000525079 SFI1A8K8P3 1242 aa14.19□□□□□ -0.14
TRAPPC4-205ENST00000525079 HIP1RO75146 1068 aa14.19□□□□□ -0.14
TRAPPC4-205ENST00000525079 EDN1P05305 212 aa14.19□□□□□ -0.14
TRAPPC4-205ENST00000525079 PRKCBP05771 671 aa14.19□□□□□ -0.14
TRAPPC4-205ENST00000525079 AKAP5P24588 427 aa14.19□□□□□ -0.14
TRAPPC4-205ENST00000525079 PPM1AP35813 382 aa14.19□□□□□ -0.14
TRAPPC4-205ENST00000525079 LTBRP36941 435 aa14.19□□□□□ -0.14
TRAPPC4-205ENST00000525079 SLC11A1P49279 550 aa14.19□□□□□ -0.14
TRAPPC4-205ENST00000525079 CEBPZQ03701 1054 aaKnown RBP14.19□□□□□ -0.14
TRAPPC4-205ENST00000525079 RAD51AP2Q09MP3 1159 aa14.19□□□□□ -0.14
TRAPPC4-205ENST00000525079 ADAM15Q13444 863 aa14.19□□□□□ -0.14
TRAPPC4-205ENST00000525079 PRPF4BQ13523 1007 aaKnown RBP14.19□□□□□ -0.14
TRAPPC4-205ENST00000525079 PPP2R5AQ15172 486 aa14.19□□□□□ -0.14
TRAPPC4-205ENST00000525079 CTC1Q2NKJ3 1217 aa14.19□□□□□ -0.14
TRAPPC4-205ENST00000525079 HYIQ5T013 277 aa14.19□□□□□ -0.14
TRAPPC4-205ENST00000525079 SLC27A1Q6PCB7 646 aa14.19□□□□□ -0.14
TRAPPC4-205ENST00000525079 C1orf186Q6ZWK4 172 aa14.19□□□□□ -0.14
TRAPPC4-205ENST00000525079 TMC7Q7Z402 723 aa14.19□□□□□ -0.14
TRAPPC4-205ENST00000525079 TMEM173Q86WV6 379 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms