RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 FGF10O15520 208 aaPredicted RBP6.25□□□□□ -1.41
USP47-204ENST00000525078 TMEM127O75204 238 aa6.25□□□□□ -1.41
USP47-204ENST00000525078 DEAF1O75398 565 aaPredicted RBP6.25□□□□□ -1.41
USP47-204ENST00000525078 DGKIO75912 1065 aa6.25□□□□□ -1.41
USP47-204ENST00000525078 ZNF205O95201 554 aa6.25□□□□□ -1.41
USP47-204ENST00000525078 OAS2P29728 719 aaKnown RBP6.25□□□□□ -1.41
USP47-204ENST00000525078 TUBP50607 506 aa6.25□□□□□ -1.41
USP47-204ENST00000525078 CACNB2Q08289 660 aaPredicted RBP6.25□□□□□ -1.41
USP47-204ENST00000525078 FOXO1Q12778 655 aa6.25□□□□□ -1.41
USP47-204ENST00000525078 MALLQ13021 153 aa6.25□□□□□ -1.41
USP47-204ENST00000525078 PLCB4Q15147 1175 aa6.25□□□□□ -1.41
USP47-204ENST00000525078 SEC23AQ15436 765 aa6.25□□□□□ -1.41
USP47-204ENST00000525078 ADCK5Q3MIX3 580 aa6.25□□□□□ -1.41
USP47-204ENST00000525078 ZBTB41Q5SVQ8 909 aa6.25□□□□□ -1.41
USP47-204ENST00000525078 SFRP5Q5T4F7 317 aa6.25□□□□□ -1.41
USP47-204ENST00000525078 KIAA1211Q6ZU35 1233 aa6.25□□□□□ -1.41
USP47-204ENST00000525078 NEK10Q6ZWH5 1172 aa6.25□□□□□ -1.41
USP47-204ENST00000525078 TMC6Q7Z403 805 aa6.25□□□□□ -1.41
USP47-204ENST00000525078 TTC7BQ86TV6 843 aa6.25□□□□□ -1.41
USP47-204ENST00000525078 SH2D3CQ8N5H7 860 aa6.25□□□□□ -1.41
USP47-204ENST00000525078 TOP6BLQ8N6T0 577 aa6.25□□□□□ -1.41
USP47-204ENST00000525078 ATP11CQ8NB49 1132 aa6.25□□□□□ -1.41
USP47-204ENST00000525078 PIP4K2CQ8TBX8 421 aa6.25□□□□□ -1.41
USP47-204ENST00000525078 SH3RF2Q8TEC5 729 aa6.25□□□□□ -1.41
USP47-204ENST00000525078 FATE1Q969F0 183 aa6.25□□□□□ -1.41
USP47-204ENST00000525078 C18orf8Q96DM3 657 aa6.25□□□□□ -1.41
USP47-204ENST00000525078 SLC35A4Q96G79 324 aa6.25□□□□□ -1.41
USP47-204ENST00000525078 MAELQ96JY0 434 aaKnown RBP6.25□□□□□ -1.41
USP47-204ENST00000525078 Q96M66 194 aa6.25□□□□□ -1.41
USP47-204ENST00000525078 TIGD1Q96MW7 591 aa6.25□□□□□ -1.41
USP47-204ENST00000525078 PTPN18Q99952 460 aa6.25□□□□□ -1.41
USP47-204ENST00000525078 MYL10Q9BUA6 226 aa6.25□□□□□ -1.41
USP47-204ENST00000525078 ADI1Q9BV57 179 aa6.25□□□□□ -1.41
USP47-204ENST00000525078 SENP6Q9GZR1 1112 aaPredicted RBP6.25□□□□□ -1.41
USP47-204ENST00000525078 GJB4Q9NTQ9 266 aa6.25□□□□□ -1.41
USP47-204ENST00000525078 AP5S1Q9NUS5 200 aa6.25□□□□□ -1.41
USP47-204ENST00000525078 ADGRE2Q9UHX3 823 aa6.25□□□□□ -1.41
USP47-204ENST00000525078 CPA4Q9UI42 421 aa6.25□□□□□ -1.41
USP47-204ENST00000525078 GPR34Q9UPC5 381 aa6.25□□□□□ -1.41
USP47-204ENST00000525078 A0A1W2PPC4 97 aa6.24□□□□□ -1.41
USP47-204ENST00000525078 UBA6A0AVT1 1052 aaPredicted RBP6.24□□□□□ -1.41
USP47-204ENST00000525078 PABPN1LA6NDY0 278 aaKnown RBP6.24□□□□□ -1.41
USP47-204ENST00000525078 IPO5O00410 1097 aaKnown RBP6.24□□□□□ -1.41
USP47-204ENST00000525078 SYT5O00445 386 aa6.24□□□□□ -1.41
USP47-204ENST00000525078 HOXC11O43248 304 aaPredicted RBP6.24□□□□□ -1.41
USP47-204ENST00000525078 DHX16O60231 1041 aaKnown RBP6.24□□□□□ -1.41
USP47-204ENST00000525078 ARHGEF15O94989 841 aa6.24□□□□□ -1.41
USP47-204ENST00000525078 TIAF1O95411 115 aa6.24□□□□□ -1.41
USP47-204ENST00000525078 SLURP2P0DP57 97 aa6.24□□□□□ -1.41
USP47-204ENST00000525078 MYCLP12524 364 aaPredicted RBP6.24□□□□□ -1.41
USP47-204ENST00000525078 XPAP23025 273 aaPredicted RBP6.24□□□□□ -1.41
USP47-204ENST00000525078 FPR2P25090 351 aa6.24□□□□□ -1.41
USP47-204ENST00000525078 SERPINF1P36955 418 aa6.24□□□□□ -1.41
USP47-204ENST00000525078 KIR3DL1P43629 444 aa6.24□□□□□ -1.41
USP47-204ENST00000525078 SUMO3P55854 103 aaPredicted RBP6.24□□□□□ -1.41
USP47-204ENST00000525078 PCBP3P57721 371 aaKnown RBP6.24□□□□□ -1.41
USP47-204ENST00000525078 CREMQ03060 361 aa6.24□□□□□ -1.41
USP47-204ENST00000525078 TRPC3Q13507 836 aa6.24□□□□□ -1.41
USP47-204ENST00000525078 KRT32Q14532 448 aa6.24□□□□□ -1.41
USP47-204ENST00000525078 PSMD6Q15008 389 aa6.24□□□□□ -1.41
USP47-204ENST00000525078 RTP2Q5QGT7 225 aa6.24□□□□□ -1.41
USP47-204ENST00000525078 CATSPEREQ5SY80 951 aa6.24□□□□□ -1.41
USP47-204ENST00000525078 FBXO38Q6PIJ6 1188 aa6.24□□□□□ -1.41
USP47-204ENST00000525078 ENOSF1Q7L5Y1 443 aa6.24□□□□□ -1.41
USP47-204ENST00000525078 SESTD1Q86VW0 696 aa6.24□□□□□ -1.41
USP47-204ENST00000525078 NLRP10Q86W26 655 aa6.24□□□□□ -1.41
USP47-204ENST00000525078 SNX32Q86XE0 403 aa6.24□□□□□ -1.41
USP47-204ENST00000525078 ZMAT2Q96NC0 199 aaKnown RBP6.24□□□□□ -1.41
USP47-204ENST00000525078 PRDM12Q9H4Q4 367 aa6.24□□□□□ -1.41
USP47-204ENST00000525078 PRDM5Q9NQX1 630 aaPredicted RBP6.24□□□□□ -1.41
USP47-204ENST00000525078 CNNM1Q9NRU3 951 aa6.24□□□□□ -1.41
USP47-204ENST00000525078 LMBRD1Q9NUN5 540 aa6.24□□□□□ -1.41
USP47-204ENST00000525078 RIC8BQ9NVN3 520 aa6.24□□□□□ -1.41
USP47-204ENST00000525078 CWC25Q9NXE8 425 aaPredicted RBP6.24□□□□□ -1.41
USP47-204ENST00000525078 NSMCE4AQ9NXX6 385 aa6.24□□□□□ -1.41
USP47-204ENST00000525078 KIF17Q9P2E2 1029 aa6.24□□□□□ -1.41
USP47-204ENST00000525078 CPNE7Q9UBL6 633 aa6.24□□□□□ -1.41
USP47-204ENST00000525078 NUB1Q9Y5A7 615 aa6.24□□□□□ -1.41
USP47-204ENST00000525078 PCDHA13Q9Y5I0 950 aa6.24□□□□□ -1.41
USP47-204ENST00000525078 NUMBLQ9Y6R0 609 aa6.24□□□□□ -1.41
USP47-204ENST00000525078 PRAMEF25A6NGN4 478 aa6.23□□□□□ -1.41
USP47-204ENST00000525078 KRIT1O00522 736 aa6.23□□□□□ -1.41
USP47-204ENST00000525078 FOXP2O15409 715 aa6.23□□□□□ -1.41
USP47-204ENST00000525078 FKTNO75072 461 aa6.23□□□□□ -1.41
USP47-204ENST00000525078 PRPF6O94906 941 aaKnown RBP6.23□□□□□ -1.41
USP47-204ENST00000525078 EOMESO95936 686 aa6.23□□□□□ -1.41
USP47-204ENST00000525078 PTMAP06454 111 aaKnown RBP6.23□□□□□ -1.41
USP47-204ENST00000525078 GSPT1P15170 499 aaKnown RBP6.23□□□□□ -1.41
USP47-204ENST00000525078 GALNSP34059 522 aa6.23□□□□□ -1.41
USP47-204ENST00000525078 NPTX2P47972 431 aa6.23□□□□□ -1.41
USP47-204ENST00000525078 PFKPQ01813 784 aa6.23□□□□□ -1.41
USP47-204ENST00000525078 DSC2Q02487 901 aa6.23□□□□□ -1.41
USP47-204ENST00000525078 MAPK7Q13164 816 aa6.23□□□□□ -1.41
USP47-204ENST00000525078 NOGQ13253 232 aa6.23□□□□□ -1.41
USP47-204ENST00000525078 TRIM25Q14258 630 aaKnown RBP6.23□□□□□ -1.41
USP47-204ENST00000525078 SPARCL1Q14515 664 aa6.23□□□□□ -1.41
USP47-204ENST00000525078 PLCL1Q15111 1095 aa6.23□□□□□ -1.41
USP47-204ENST00000525078 NR0B2Q15466 257 aa6.23□□□□□ -1.41
USP47-204ENST00000525078 FAM110CQ1W6H9 321 aa6.23□□□□□ -1.41
USP47-204ENST00000525078 MUM1L1Q5H9M0 696 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms