RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 TMEM192Q8IY95 271 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 EXOC8Q8IYI6 725 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 CEP120Q8N960 986 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 TMEM161BQ8NDZ6 487 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 ZSWIM2Q8NEG5 633 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 ENGASEQ8NFI3 743 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 RABGGTAQ92696 567 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 BICD1Q96G01 975 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 FAM84AQ96KN4 292 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 FIZ1Q96SL8 496 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 PBX4Q9BYU1 374 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 TRIM9Q9C026 710 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 HAPLN2Q9GZV7 340 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 CCDC113Q9H0I3 377 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 NXF3Q9H4D5 531 aaKnown RBP5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 MRPL44Q9H9J2 332 aaKnown RBP5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 PARVGQ9HBI0 331 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 LMBRD1Q9NUN5 540 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 AGPAT5Q9NUQ2 364 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 KBTBD4Q9NVX7 518 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 DACT1Q9NYF0 836 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 ANKFY1Q9P2R3 1169 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 CACNG4Q9UBN1 327 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 LRFN2Q9ULH4 789 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 MAPK8IP1Q9UQF2 711 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 INPP5FQ9Y2H2 1132 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 GDAQ9Y2T3 454 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 PPME1Q9Y570 386 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 SCN5AQ14524 2016 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 MYH15Q9Y2K3 1946 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 FAM237AA0A1B0GTK4 181 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 GOLGA8IPA6NC78 632 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 GOLGA8JA6NMD2 632 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 TBKBP1A7MCY6 615 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 C9IYK1 514 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 SLC26A4O43511 780 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 KLRC4O43908 158 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 PARNO95453 639 aaKnown RBP5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 RPN1P04843 607 aaKnown RBP5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 CA3P07451 260 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 PFKMP08237 780 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 ATF7P17544 494 aaPredicted RBP5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 DNAJB2P25686 324 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 TNFSF9P41273 254 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 ZNF131P52739 623 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 NCKAP1LP55160 1127 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 UBE2HP62256 183 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 FAM160A1Q05DH4 1040 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 SPAG1Q07617 926 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 STRN3Q13033 797 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 POSTNQ15063 836 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 PPP2R5AQ15172 486 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 MAPK6Q16659 721 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 CLLU1OSQ5K130 101 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 ZBTB41Q5SVQ8 909 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 ATF7IP2Q5U623 682 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 CDCA2Q69YH5 1023 aaPredicted RBP5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 FAM178BQ8IXR5 827 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 CCDC65Q8IXS2 484 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 THNSL1Q8IYQ7 743 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 SMYD4Q8IYR2 804 aaPredicted RBP5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 USP38Q8NB14 1042 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 SMG8Q8ND04 991 aaKnown RBP5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 HELQQ8TDG4 1101 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 APBB2Q92870 758 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 ZFP42Q96MM3 310 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 YME1L1Q96TA2 773 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 C7orf25Q9BPX7 421 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 TCHPQ9BT92 498 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 GBP3Q9H0R5 595 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 CDT1Q9H211 546 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 TSPYL2Q9H2G4 693 aaPredicted RBP5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 TNMDQ9H2S6 317 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 FZD8Q9H461 694 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 CUEDC2Q9H467 287 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 PCIF1Q9H4Z3 704 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 PDZD7Q9H5P4 517 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 RGS18Q9NS28 235 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 FAM105AQ9NUU6 356 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 EXOC1Q9NV70 894 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 LARSQ9P2J5 1176 aaKnown RBP5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 ARHGAP28Q9P2N2 729 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 PARP2Q9UGN5 583 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 ODF2LQ9ULJ1 636 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 TBX20Q9UMR3 447 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 PCDHB7Q9Y5E2 793 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 PCDHB2Q9Y5E7 798 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 SQORQ9Y6N5 450 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 SIP14410 1827 aa5.06□□□□□ -1.6
CHMP4A-202ENST00000524955 TRIP12Q14669 1992 aaPredicted RBP5.05□□□□□ -1.6
CHMP4A-202ENST00000524955 PHLPP2Q6ZVD8 1323 aa5.05□□□□□ -1.6
CHMP4A-202ENST00000524955 ARID2Q68CP9 1835 aa5.05□□□□□ -1.6
CHMP4A-202ENST00000524955 EPOPA6NHQ4 379 aa5.05□□□□□ -1.6
CHMP4A-202ENST00000524955 NT5C1B-RDH14C9J2C7 533 aa5.05□□□□□ -1.6
CHMP4A-202ENST00000524955 F8W810 466 aa5.05□□□□□ -1.6
CHMP4A-202ENST00000524955 ACKR2O00590 384 aa5.05□□□□□ -1.6
CHMP4A-202ENST00000524955 CLIC2O15247 247 aa5.05□□□□□ -1.6
CHMP4A-202ENST00000524955 GTPBP6O43824 516 aaPredicted RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms