RNA–Protein interactions for RNA: ENST00000524306.1

CLINT1-208, Transcript of clathrin interactor 1, humanhuman

TSL 1 (best)

Gene CLINT1, Length 2,905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-208ENST00000524306 PHLDB3Q6NSJ2 640 aa5.9□□□□□ -1.46
CLINT1-208ENST00000524306 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.9□□□□□ -1.46
CLINT1-208ENST00000524306 ZNF677Q86XU0 584 aa5.9□□□□□ -1.46
CLINT1-208ENST00000524306 NIM1KQ8IY84 436 aa5.9□□□□□ -1.46
CLINT1-208ENST00000524306 SLC35G2Q8TBE7 412 aa5.9□□□□□ -1.46
CLINT1-208ENST00000524306 U2AF1L4Q8WU68 220 aaKnown RBP5.9□□□□□ -1.46
CLINT1-208ENST00000524306 SHC3Q92529 594 aa5.9□□□□□ -1.46
CLINT1-208ENST00000524306 ATP6V1G3Q96LB4 118 aa5.9□□□□□ -1.46
CLINT1-208ENST00000524306 KIAA1586Q9HCI6 787 aa5.9□□□□□ -1.46
CLINT1-208ENST00000524306 PDLIM7Q9NR12 457 aa5.9□□□□□ -1.46
CLINT1-208ENST00000524306 PARP2Q9UGN5 583 aa5.9□□□□□ -1.46
CLINT1-208ENST00000524306 LCMT1Q9UIC8 334 aa5.9□□□□□ -1.46
CLINT1-208ENST00000524306 PPP1R9AQ9ULJ8 1098 aa5.9□□□□□ -1.46
CLINT1-208ENST00000524306 SIP14410 1827 aa5.9□□□□□ -1.47
CLINT1-208ENST00000524306 OTOFQ9HC10 1997 aa5.9□□□□□ -1.47
CLINT1-208ENST00000524306 GOLGA6L10A0A0M3HER8 536 aa5.9□□□□□ -1.47
CLINT1-208ENST00000524306 ZNF233A6NK53 670 aa5.9□□□□□ -1.47
CLINT1-208ENST00000524306 TCP10L2B9ZVM9 353 aa5.9□□□□□ -1.47
CLINT1-208ENST00000524306 HAX1O00165 279 aa5.9□□□□□ -1.47
CLINT1-208ENST00000524306 PODXLO00592 558 aa5.9□□□□□ -1.47
CLINT1-208ENST00000524306 BUB1BO60566 1050 aaPredicted RBP5.9□□□□□ -1.47
CLINT1-208ENST00000524306 ZMYND10O75800 440 aa5.9□□□□□ -1.47
CLINT1-208ENST00000524306 NUDT17P0C025 328 aa5.9□□□□□ -1.47
CLINT1-208ENST00000524306 ALAS1P13196 640 aa5.9□□□□□ -1.47
CLINT1-208ENST00000524306 DPEP1P16444 411 aa5.9□□□□□ -1.47
CLINT1-208ENST00000524306 GARTP22102 1010 aa5.9□□□□□ -1.47
CLINT1-208ENST00000524306 CHRNA5P30532 468 aa5.9□□□□□ -1.47
CLINT1-208ENST00000524306 NOP2P46087 812 aaKnown RBP5.9□□□□□ -1.47
CLINT1-208ENST00000524306 GYS2P54840 703 aa5.9□□□□□ -1.47
CLINT1-208ENST00000524306 CORO7P57737 925 aa5.9□□□□□ -1.47
CLINT1-208ENST00000524306 GPC5P78333 572 aa5.9□□□□□ -1.47
CLINT1-208ENST00000524306 MRPS9P82933 396 aaKnown RBP5.9□□□□□ -1.47
CLINT1-208ENST00000524306 SLC7A5Q01650 507 aa5.9□□□□□ -1.47
CLINT1-208ENST00000524306 PTP4A2Q12974 167 aa5.9□□□□□ -1.47
CLINT1-208ENST00000524306 ITGB3BPQ13352 177 aaPredicted RBP5.9□□□□□ -1.47
CLINT1-208ENST00000524306 ZC2HC1CQ53FD0 456 aaPredicted RBP5.9□□□□□ -1.47
CLINT1-208ENST00000524306 CCDC174Q6PII3 467 aa5.9□□□□□ -1.47
CLINT1-208ENST00000524306 B4GALNT4Q76KP1 1039 aa5.9□□□□□ -1.47
CLINT1-208ENST00000524306 ARMC9Q7Z3E5 817 aa5.9□□□□□ -1.47
CLINT1-208ENST00000524306 CD101Q93033 1021 aa5.9□□□□□ -1.47
CLINT1-208ENST00000524306 CENPTQ96BT3 561 aa5.9□□□□□ -1.47
CLINT1-208ENST00000524306 CDHR1Q96JP9 859 aa5.9□□□□□ -1.47
CLINT1-208ENST00000524306 TEPSINQ96N21 525 aa5.9□□□□□ -1.47
CLINT1-208ENST00000524306 TMEM8AQ9HCN3 771 aa5.9□□□□□ -1.47
CLINT1-208ENST00000524306 CNOT7Q9UIV1 285 aaKnown RBP5.9□□□□□ -1.47
CLINT1-208ENST00000524306 NOCTQ9UK39 431 aaKnown RBP5.9□□□□□ -1.47
CLINT1-208ENST00000524306 NFU1Q9UMS0 254 aa5.9□□□□□ -1.47
CLINT1-208ENST00000524306 ASTN2O75129 1339 aaPredicted RBP5.9□□□□□ -1.47
CLINT1-208ENST00000524306 PTPRFP10586 1907 aa5.9□□□□□ -1.47
CLINT1-208ENST00000524306 K7ENM7 598 aa5.89□□□□□ -1.47
CLINT1-208ENST00000524306 KRIT1O00522 736 aa5.89□□□□□ -1.47
CLINT1-208ENST00000524306 RAD21O60216 631 aa5.89□□□□□ -1.47
CLINT1-208ENST00000524306 CEP104O60308 925 aa5.89□□□□□ -1.47
CLINT1-208ENST00000524306 PIGRP01833 764 aa5.89□□□□□ -1.47
CLINT1-208ENST00000524306 MYBL1P10243 752 aa5.89□□□□□ -1.47
CLINT1-208ENST00000524306 VCAM1P19320 739 aa5.89□□□□□ -1.47
CLINT1-208ENST00000524306 BRD2P25440 801 aaKnown RBP5.89□□□□□ -1.47
CLINT1-208ENST00000524306 YWHABP31946 246 aaKnown RBP5.89□□□□□ -1.47
CLINT1-208ENST00000524306 CHRNA3P32297 505 aa5.89□□□□□ -1.47
CLINT1-208ENST00000524306 MAGEA9P43362 315 aa5.89□□□□□ -1.47
CLINT1-208ENST00000524306 MFAP3P55082 362 aa5.89□□□□□ -1.47
CLINT1-208ENST00000524306 GCNT1Q02742 428 aa5.89□□□□□ -1.47
CLINT1-208ENST00000524306 MTMR1Q13613 665 aa5.89□□□□□ -1.47
CLINT1-208ENST00000524306 PGM5Q15124 567 aa5.89□□□□□ -1.47
CLINT1-208ENST00000524306 NOL9Q5SY16 702 aaKnown RBP5.89□□□□□ -1.47
CLINT1-208ENST00000524306 DUPD1Q68J44 220 aa5.89□□□□□ -1.47
CLINT1-208ENST00000524306 SYDE1Q6ZW31 735 aaPredicted RBP5.89□□□□□ -1.47
CLINT1-208ENST00000524306 DAAM2Q86T65 1068 aa5.89□□□□□ -1.47
CLINT1-208ENST00000524306 GSPT2Q8IYD1 628 aaKnown RBP5.89□□□□□ -1.47
CLINT1-208ENST00000524306 SYCP3Q8IZU3 236 aa5.89□□□□□ -1.47
CLINT1-208ENST00000524306 SPICE1Q8N0Z3 855 aa5.89□□□□□ -1.47
CLINT1-208ENST00000524306 UBL4BQ8N7F7 174 aa5.89□□□□□ -1.47
CLINT1-208ENST00000524306 TRIM11Q96F44 468 aa5.89□□□□□ -1.47
CLINT1-208ENST00000524306 CCDC43Q96MW1 224 aaKnown RBP5.89□□□□□ -1.47
CLINT1-208ENST00000524306 TAOK3Q9H2K8 898 aa5.89□□□□□ -1.47
CLINT1-208ENST00000524306 AVENQ9NQS1 362 aaPredicted RBP5.89□□□□□ -1.47
CLINT1-208ENST00000524306 HSPBP1Q9NZL4 362 aa5.89□□□□□ -1.47
CLINT1-208ENST00000524306 COL20A1Q9P218 1284 aa5.89□□□□□ -1.47
CLINT1-208ENST00000524306 UTP11Q9Y3A2 253 aaKnown RBP5.89□□□□□ -1.47
CLINT1-208ENST00000524306 RRP15Q9Y3B9 282 aaKnown RBP5.89□□□□□ -1.47
CLINT1-208ENST00000524306 STYXL1Q9Y6J8 313 aa5.89□□□□□ -1.47
CLINT1-208ENST00000524306 MYH10P35580 1976 aa5.89□□□□□ -1.47
CLINT1-208ENST00000524306 STBD1O95210 358 aa5.89□□□□□ -1.47
CLINT1-208ENST00000524306 INPP5BP32019 993 aa5.89□□□□□ -1.47
CLINT1-208ENST00000524306 FNTAP49354 379 aa5.89□□□□□ -1.47
CLINT1-208ENST00000524306 SMTNP53814 917 aa5.89□□□□□ -1.47
CLINT1-208ENST00000524306 ARID5AQ03989 594 aa5.89□□□□□ -1.47
CLINT1-208ENST00000524306 BRDTQ58F21 947 aaPredicted RBP5.89□□□□□ -1.47
CLINT1-208ENST00000524306 C15orf39Q6ZRI6 1047 aa5.89□□□□□ -1.47
CLINT1-208ENST00000524306 PAXIP1Q6ZW49 1069 aaPredicted RBP5.89□□□□□ -1.47
CLINT1-208ENST00000524306 OTUD6AQ7L8S5 288 aa5.89□□□□□ -1.47
CLINT1-208ENST00000524306 HAUS6Q7Z4H7 955 aa5.89□□□□□ -1.47
CLINT1-208ENST00000524306 TAX1BP1Q86VP1 789 aa5.89□□□□□ -1.47
CLINT1-208ENST00000524306 GLYCTKQ8IVS8 523 aa5.89□□□□□ -1.47
CLINT1-208ENST00000524306 LARGE2Q8N3Y3 721 aa5.89□□□□□ -1.47
CLINT1-208ENST00000524306 TMEM161BQ8NDZ6 487 aa5.89□□□□□ -1.47
CLINT1-208ENST00000524306 MCPH1Q8NEM0 835 aa5.89□□□□□ -1.47
CLINT1-208ENST00000524306 REPS2Q8NFH8 660 aa5.89□□□□□ -1.47
CLINT1-208ENST00000524306 MAIP1Q8WWC4 291 aa5.89□□□□□ -1.47
CLINT1-208ENST00000524306 PDCD2LQ9BRP1 358 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms