RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 ZNF558Q96NG5 402 aa21.19■□□□□ 0.98
FBXO28-205ENST00000523990 EIF2AQ9BY44 585 aaKnown RBP21.19■□□□□ 0.98
FBXO28-205ENST00000523990 DNM3Q9UQ16 869 aa21.19■□□□□ 0.98
FBXO28-205ENST00000523990 CNTNAP2Q9UHC6 1331 aa21.18■□□□□ 0.98
FBXO28-205ENST00000523990 B4GALT5O43286 388 aa21.18■□□□□ 0.98
FBXO28-205ENST00000523990 OFD1O75665 1012 aa21.18■□□□□ 0.98
FBXO28-205ENST00000523990 BMP1P13497 986 aa21.18■□□□□ 0.98
FBXO28-205ENST00000523990 NCLP19338 710 aaKnown RBP21.18■□□□□ 0.98
FBXO28-205ENST00000523990 PPM1AP35813 382 aa21.18■□□□□ 0.98
FBXO28-205ENST00000523990 NAMPTP43490 491 aa21.18■□□□□ 0.98
FBXO28-205ENST00000523990 PLCB3Q01970 1234 aa21.18■□□□□ 0.98
FBXO28-205ENST00000523990 NCBP1Q09161 790 aaKnown RBP21.18■□□□□ 0.98
FBXO28-205ENST00000523990 HYAL1Q12794 435 aa21.18■□□□□ 0.98
FBXO28-205ENST00000523990 NOMO2Q5JPE7 1267 aa21.18■□□□□ 0.98
FBXO28-205ENST00000523990 PPP4R3CPQ6ZMV5 832 aa21.18■□□□□ 0.98
FBXO28-205ENST00000523990 ZBTB8OSQ8IWT0 167 aa21.18■□□□□ 0.98
FBXO28-205ENST00000523990 PRIMPOLQ96LW4 560 aa21.18■□□□□ 0.98
FBXO28-205ENST00000523990 CSRNP2Q9H175 543 aa21.18■□□□□ 0.98
FBXO28-205ENST00000523990 RSAD1Q9HA92 442 aa21.18■□□□□ 0.98
FBXO28-205ENST00000523990 TLR9Q9NR96 1032 aa21.18■□□□□ 0.98
FBXO28-205ENST00000523990 TBC1D13Q9NVG8 400 aa21.18■□□□□ 0.98
FBXO28-205ENST00000523990 LZTS1Q9Y250 596 aa21.18■□□□□ 0.98
FBXO28-205ENST00000523990 INPP5FQ9Y2H2 1132 aa21.18■□□□□ 0.98
FBXO28-205ENST00000523990 IPPQ9Y573 584 aa21.18■□□□□ 0.98
FBXO28-205ENST00000523990 BMP15O95972 392 aa21.17■□□□□ 0.98
FBXO28-205ENST00000523990 KCNA5P22460 613 aa21.17■□□□□ 0.98
FBXO28-205ENST00000523990 RESTQ13127 1097 aa21.17■□□□□ 0.98
FBXO28-205ENST00000523990 FAM187BQ17R55 369 aa21.17■□□□□ 0.98
FBXO28-205ENST00000523990 CNNM3Q8NE01 707 aa21.17■□□□□ 0.98
FBXO28-205ENST00000523990 ADAMTS19Q8TE59 1207 aa21.17■□□□□ 0.98
FBXO28-205ENST00000523990 KIFAP3Q92845 792 aa21.17■□□□□ 0.98
FBXO28-205ENST00000523990 PNMA5Q96PV4 448 aa21.17■□□□□ 0.98
FBXO28-205ENST00000523990 C2orf40Q9H1Z8 148 aa21.17■□□□□ 0.98
FBXO28-205ENST00000523990 FZD8Q9H461 694 aa21.17■□□□□ 0.98
FBXO28-205ENST00000523990 FOXD4L1Q9NU39 408 aa21.17■□□□□ 0.98
FBXO28-205ENST00000523990 PRMT7Q9NVM4 692 aaPredicted RBP21.17■□□□□ 0.98
FBXO28-205ENST00000523990 PCDHGC5Q9Y5F6 944 aa21.17■□□□□ 0.98
FBXO28-205ENST00000523990 BCAR1P56945 870 aa21.16■□□□□ 0.98
FBXO28-205ENST00000523990 PPP2R5AQ15172 486 aa21.16■□□□□ 0.98
FBXO28-205ENST00000523990 SF3A1Q15459 793 aaKnown RBP21.16■□□□□ 0.98
FBXO28-205ENST00000523990 CTC1Q2NKJ3 1217 aa21.16■□□□□ 0.98
FBXO28-205ENST00000523990 ADGRD2Q7Z7M1 963 aa21.16■□□□□ 0.98
FBXO28-205ENST00000523990 SLC39A11Q8N1S5 342 aa21.16■□□□□ 0.98
FBXO28-205ENST00000523990 MRPS27Q92552 414 aaKnown RBP21.16■□□□□ 0.98
FBXO28-205ENST00000523990 AK8Q96MA6 479 aa21.16■□□□□ 0.98
FBXO28-205ENST00000523990 RUSC1Q9BVN2 902 aa21.16■□□□□ 0.98
FBXO28-205ENST00000523990 CCDC113Q9H0I3 377 aa21.16■□□□□ 0.98
FBXO28-205ENST00000523990 NT5C3AQ9H0P0 336 aa21.16■□□□□ 0.98
FBXO28-205ENST00000523990 POLD4Q9HCU8 107 aa21.16■□□□□ 0.98
FBXO28-205ENST00000523990 A0A1B0GUA9 196 aa21.15■□□□□ 0.98
FBXO28-205ENST00000523990 NCK2O43639 380 aa21.15■□□□□ 0.98
FBXO28-205ENST00000523990 ZC3H11AO75152 810 aaKnown RBP eCLIP21.15■□□□□ 0.98
FBXO28-205ENST00000523990 GTF2F1P35269 517 aaKnown RBP eCLIP21.15■□□□□ 0.98
FBXO28-205ENST00000523990 AFF1P51825 1210 aaKnown RBP21.15■□□□□ 0.98
FBXO28-205ENST00000523990 ERVFC1P60507 584 aa21.15■□□□□ 0.98
FBXO28-205ENST00000523990 ZRSR1Q15695 479 aaKnown RBP21.15■□□□□ 0.98
FBXO28-205ENST00000523990 LEXMQ3ZCV2 418 aa21.15■□□□□ 0.98
FBXO28-205ENST00000523990 SLC27A1Q6PCB7 646 aa21.15■□□□□ 0.98
FBXO28-205ENST00000523990 CDR2LQ86X02 465 aaPredicted RBP21.15■□□□□ 0.98
FBXO28-205ENST00000523990 KCTD17Q8N5Z5 321 aa21.15■□□□□ 0.98
FBXO28-205ENST00000523990 PPP2R3CQ969Q6 453 aa21.15■□□□□ 0.98
FBXO28-205ENST00000523990 KIFC3Q9BVG8 833 aa21.15■□□□□ 0.98
FBXO28-205ENST00000523990 NRDE2Q9H7Z3 1164 aa21.15■□□□□ 0.98
FBXO28-205ENST00000523990 CLDND1Q9NY35 253 aa21.15■□□□□ 0.98
FBXO28-205ENST00000523990 SPG21Q9NZD8 308 aa21.15■□□□□ 0.98
FBXO28-205ENST00000523990 MTMR6Q9Y217 621 aa21.15■□□□□ 0.98
FBXO28-205ENST00000523990 FSCN2O14926 492 aa21.14■□□□□ 0.98
FBXO28-205ENST00000523990 B4GALT3O60512 393 aa21.14■□□□□ 0.98
FBXO28-205ENST00000523990 EDN1P05305 212 aa21.14■□□□□ 0.98
FBXO28-205ENST00000523990 ITGA4P13612 1032 aa21.14■□□□□ 0.98
FBXO28-205ENST00000523990 LTBRP36941 435 aa21.14■□□□□ 0.98
FBXO28-205ENST00000523990 GRIN1Q05586 938 aa21.14■□□□□ 0.98
FBXO28-205ENST00000523990 TMEM119Q4V9L6 283 aa21.14■□□□□ 0.98
FBXO28-205ENST00000523990 RINT1Q6NUQ1 792 aa21.14■□□□□ 0.98
FBXO28-205ENST00000523990 C1orf186Q6ZWK4 172 aa21.14■□□□□ 0.98
FBXO28-205ENST00000523990 CABP7Q86V35 215 aa21.14■□□□□ 0.98
FBXO28-205ENST00000523990 DAW1Q8N136 415 aa21.14■□□□□ 0.98
FBXO28-205ENST00000523990 DEPTORQ8TB45 409 aa21.14■□□□□ 0.98
FBXO28-205ENST00000523990 URGCPQ8TCY9 931 aa21.14■□□□□ 0.98
FBXO28-205ENST00000523990 IFT74Q96LB3 600 aa21.14■□□□□ 0.98
FBXO28-205ENST00000523990 UHRF1Q96T88 793 aaPredicted RBP21.14■□□□□ 0.98
FBXO28-205ENST00000523990 TRIM6Q9C030 488 aaPredicted RBP21.14■□□□□ 0.98
FBXO28-205ENST00000523990 RNF39Q9H2S5 420 aa21.14■□□□□ 0.98
FBXO28-205ENST00000523990 NXF3Q9H4D5 531 aaKnown RBP21.14■□□□□ 0.98
FBXO28-205ENST00000523990 UBN1Q9NPG3 1134 aa21.14■□□□□ 0.98
FBXO28-205ENST00000523990 HES2Q9Y543 173 aa21.14■□□□□ 0.98
FBXO28-205ENST00000523990 TRIP11Q15643 1979 aa21.14■□□□□ 0.97
FBXO28-205ENST00000523990 TTLL13PA6NNM8 815 aa21.13■□□□□ 0.97
FBXO28-205ENST00000523990 NT5C1B-RDH14C9J2C7 533 aa21.13■□□□□ 0.97
FBXO28-205ENST00000523990 INPPL1O15357 1258 aa21.13■□□□□ 0.97
FBXO28-205ENST00000523990 PRKCBP05771 671 aa21.13■□□□□ 0.97
FBXO28-205ENST00000523990 ALDH7A1P49419 539 aaKnown RBP21.13■□□□□ 0.97
FBXO28-205ENST00000523990 RNASELQ05823 741 aaKnown RBP21.13■□□□□ 0.97
FBXO28-205ENST00000523990 MAPK6Q16659 721 aa21.13■□□□□ 0.97
FBXO28-205ENST00000523990 TMEM173Q86WV6 379 aaPredicted RBP21.13■□□□□ 0.97
FBXO28-205ENST00000523990 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.13■□□□□ 0.97
FBXO28-205ENST00000523990 CDK5RAP3Q96JB5 506 aa21.13■□□□□ 0.97
FBXO28-205ENST00000523990 DNAJB4Q9UDY4 337 aa21.13■□□□□ 0.97
FBXO28-205ENST00000523990 CLIC4Q9Y696 253 aa21.13■□□□□ 0.97
FBXO28-205ENST00000523990 CARNS1A5YM72 827 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms