RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 CLP1Q92989 425 aaKnown RBP13.85□□□□□ -0.19
VEGFA-225ENST00000523950 GAS2L1Q99501 681 aaPredicted RBP13.85□□□□□ -0.19
VEGFA-225ENST00000523950 CDX2Q99626 313 aaPredicted RBP13.85□□□□□ -0.19
VEGFA-225ENST00000523950 MAGEF1Q9HAY2 307 aa13.85□□□□□ -0.19
VEGFA-225ENST00000523950 KMT5AQ9NQR1 393 aa13.85□□□□□ -0.19
VEGFA-225ENST00000523950 FAM13BQ9NYF5 915 aa13.85□□□□□ -0.19
VEGFA-225ENST00000523950 ARHGAP28Q9P2N2 729 aa13.85□□□□□ -0.19
VEGFA-225ENST00000523950 CIZ1Q9ULV3 898 aaPredicted RBP13.85□□□□□ -0.19
VEGFA-225ENST00000523950 PCDHA7Q9UN72 937 aa13.85□□□□□ -0.19
VEGFA-225ENST00000523950 STXBP5LQ9Y2K9 1186 aa13.85□□□□□ -0.19
VEGFA-225ENST00000523950 KIAA1671Q9BY89 1806 aa13.85□□□□□ -0.19
VEGFA-225ENST00000523950 COL4A4P53420 1690 aaPredicted RBP13.85□□□□□ -0.19
VEGFA-225ENST00000523950 ZMYM2Q9UBW7 1377 aa13.84□□□□□ -0.19
VEGFA-225ENST00000523950 A0A1B0GUA9 196 aa13.84□□□□□ -0.19
VEGFA-225ENST00000523950 CARNS1A5YM72 827 aa13.84□□□□□ -0.19
VEGFA-225ENST00000523950 CCDC169A6NNP5 214 aa13.84□□□□□ -0.19
VEGFA-225ENST00000523950 RBAK-RBAKDNI3L0D1 243 aa13.84□□□□□ -0.19
VEGFA-225ENST00000523950 K7ERI5 159 aa13.84□□□□□ -0.19
VEGFA-225ENST00000523950 N4BP3O15049 544 aa13.84□□□□□ -0.19
VEGFA-225ENST00000523950 FAM13AO94988 1023 aa13.84□□□□□ -0.19
VEGFA-225ENST00000523950 ARHGEF15O94989 841 aa13.84□□□□□ -0.19
VEGFA-225ENST00000523950 SLC34A2O95436 690 aa13.84□□□□□ -0.19
VEGFA-225ENST00000523950 PRKCBP05771 671 aa13.84□□□□□ -0.19
VEGFA-225ENST00000523950 KRT18P05783 430 aaKnown RBP13.84□□□□□ -0.19
VEGFA-225ENST00000523950 RB1P06400 928 aa13.84□□□□□ -0.19
VEGFA-225ENST00000523950 ATF7P17544 494 aaPredicted RBP13.84□□□□□ -0.19
VEGFA-225ENST00000523950 NCLP19338 710 aaKnown RBP13.84□□□□□ -0.19
VEGFA-225ENST00000523950 ZNF131P52739 623 aa13.84□□□□□ -0.19
VEGFA-225ENST00000523950 PRPF4BQ13523 1007 aaKnown RBP13.84□□□□□ -0.19
VEGFA-225ENST00000523950 NAALADL2Q58DX5 795 aa13.84□□□□□ -0.19
VEGFA-225ENST00000523950 UBXN11Q5T124 520 aa13.84□□□□□ -0.19
VEGFA-225ENST00000523950 SLC27A1Q6PCB7 646 aa13.84□□□□□ -0.19
VEGFA-225ENST00000523950 SHC4Q6S5L8 630 aa13.84□□□□□ -0.19
VEGFA-225ENST00000523950 APBB1IPQ7Z5R6 666 aaPredicted RBP13.84□□□□□ -0.19
VEGFA-225ENST00000523950 MRPL10Q7Z7H8 261 aaKnown RBP13.84□□□□□ -0.19
VEGFA-225ENST00000523950 SLC17A8Q8NDX2 589 aa13.84□□□□□ -0.19
VEGFA-225ENST00000523950 LEO1Q8WVC0 666 aaPredicted RBP13.84□□□□□ -0.19
VEGFA-225ENST00000523950 SPATA32Q96LK8 384 aa13.84□□□□□ -0.19
VEGFA-225ENST00000523950 REEP2Q9BRK0 252 aa13.84□□□□□ -0.19
VEGFA-225ENST00000523950 PLVAPQ9BX97 442 aa13.84□□□□□ -0.19
VEGFA-225ENST00000523950 MRPL9Q9BYD2 267 aaKnown RBP13.84□□□□□ -0.19
VEGFA-225ENST00000523950 LRRC27Q9C0I9 530 aa13.84□□□□□ -0.19
VEGFA-225ENST00000523950 TNMDQ9H2S6 317 aa13.84□□□□□ -0.19
VEGFA-225ENST00000523950 PARVGQ9HBI0 331 aa13.84□□□□□ -0.19
VEGFA-225ENST00000523950 UBN1Q9NPG3 1134 aa13.84□□□□□ -0.19
VEGFA-225ENST00000523950 PCDHB2Q9Y5E7 798 aa13.84□□□□□ -0.19
VEGFA-225ENST00000523950 TBKBP1A7MCY6 615 aa13.83□□□□□ -0.2
VEGFA-225ENST00000523950 C5orf67F2Z3F1 127 aa13.83□□□□□ -0.2
VEGFA-225ENST00000523950 TBCAO75347 108 aaKnown RBP13.83□□□□□ -0.2
VEGFA-225ENST00000523950 GIT2Q14161 759 aa13.83□□□□□ -0.2
VEGFA-225ENST00000523950 DHX8Q14562 1220 aaKnown RBP13.83□□□□□ -0.2
VEGFA-225ENST00000523950 CSPP1Q1MSJ5 1256 aa13.83□□□□□ -0.2
VEGFA-225ENST00000523950 RESP18Q5W5W9 173 aa13.83□□□□□ -0.2
VEGFA-225ENST00000523950 ADALQ6DHV7 355 aa13.83□□□□□ -0.2
VEGFA-225ENST00000523950 TMEM192Q8IY95 271 aa13.83□□□□□ -0.2
VEGFA-225ENST00000523950 LRRC43Q8N309 656 aa13.83□□□□□ -0.2
VEGFA-225ENST00000523950 IQUBQ8NA54 791 aa13.83□□□□□ -0.2
VEGFA-225ENST00000523950 ARNTL2Q8WYA1 636 aa13.83□□□□□ -0.2
VEGFA-225ENST00000523950 IPO9Q96P70 1041 aaKnown RBP13.83□□□□□ -0.2
VEGFA-225ENST00000523950 ADPGKQ9BRR6 497 aa13.83□□□□□ -0.2
VEGFA-225ENST00000523950 TRIM6Q9C030 488 aaPredicted RBP13.83□□□□□ -0.2
VEGFA-225ENST00000523950 PRDM12Q9H4Q4 367 aa13.83□□□□□ -0.2
VEGFA-225ENST00000523950 AAASQ9NRG9 546 aa13.83□□□□□ -0.2
VEGFA-225ENST00000523950 RNF19AQ9NV58 838 aa13.83□□□□□ -0.2
VEGFA-225ENST00000523950 A0A087X0B3 334 aa13.82□□□□□ -0.2
VEGFA-225ENST00000523950 B4GALT5O43286 388 aa13.82□□□□□ -0.2
VEGFA-225ENST00000523950 LINC00271P0C7V0 271 aa13.82□□□□□ -0.2
VEGFA-225ENST00000523950 MAPTP10636 758 aaKnown RBP13.82□□□□□ -0.2
VEGFA-225ENST00000523950 FGFR1P11362 822 aa13.82□□□□□ -0.2
VEGFA-225ENST00000523950 FOSL2P15408 326 aa13.82□□□□□ -0.2
VEGFA-225ENST00000523950 POU3F3P20264 500 aaPredicted RBP13.82□□□□□ -0.2
VEGFA-225ENST00000523950 IBSPP21815 317 aaPredicted RBP13.82□□□□□ -0.2
VEGFA-225ENST00000523950 BMPR1AP36894 532 aa13.82□□□□□ -0.2
VEGFA-225ENST00000523950 NCKAP1LP55160 1127 aa13.82□□□□□ -0.2
VEGFA-225ENST00000523950 AMPD3Q01432 767 aa13.82□□□□□ -0.2
VEGFA-225ENST00000523950 RAD51AP2Q09MP3 1159 aa13.82□□□□□ -0.2
VEGFA-225ENST00000523950 STRN3Q13033 797 aa13.82□□□□□ -0.2
VEGFA-225ENST00000523950 E2F4Q16254 413 aa13.82□□□□□ -0.2
VEGFA-225ENST00000523950 DCAF4L1Q3SXM0 396 aa13.82□□□□□ -0.2
VEGFA-225ENST00000523950 EPC2Q52LR7 807 aa13.82□□□□□ -0.2
VEGFA-225ENST00000523950 GLB1LQ6UWU2 654 aa13.82□□□□□ -0.2
VEGFA-225ENST00000523950 RNF169Q8NCN4 708 aa13.82□□□□□ -0.2
VEGFA-225ENST00000523950 FBXO22Q8NEZ5 403 aa13.82□□□□□ -0.2
VEGFA-225ENST00000523950 MYLIPQ8WY64 445 aa13.82□□□□□ -0.2
VEGFA-225ENST00000523950 P2RX5Q93086 422 aa13.82□□□□□ -0.2
VEGFA-225ENST00000523950 CPB2Q96IY4 423 aa13.82□□□□□ -0.2
VEGFA-225ENST00000523950 CASD1Q96PB1 797 aa13.82□□□□□ -0.2
VEGFA-225ENST00000523950 C17orf80Q9BSJ5 609 aa13.82□□□□□ -0.2
VEGFA-225ENST00000523950 KIFC3Q9BVG8 833 aa13.82□□□□□ -0.2
VEGFA-225ENST00000523950 MRPL4Q9BYD3 311 aaKnown RBP13.82□□□□□ -0.2
VEGFA-225ENST00000523950 POLD4Q9HCU8 107 aa13.82□□□□□ -0.2
VEGFA-225ENST00000523950 LMCD1Q9NZU5 365 aa13.82□□□□□ -0.2
VEGFA-225ENST00000523950 SEL1LQ9UBV2 794 aa13.82□□□□□ -0.2
VEGFA-225ENST00000523950 MRPL42Q9Y6G3 142 aaKnown RBP13.82□□□□□ -0.2
VEGFA-225ENST00000523950 LAMA2P24043 3122 aaKnown RBP13.81□□□□□ -0.2
VEGFA-225ENST00000523950 NPHP3-ACAD11A0A0J9YXS1 232 aa13.81□□□□□ -0.2
VEGFA-225ENST00000523950 SFI1A8K8P3 1242 aa13.81□□□□□ -0.2
VEGFA-225ENST00000523950 SLC16A4O15374 487 aa13.81□□□□□ -0.2
VEGFA-225ENST00000523950 TRAK2O60296 914 aa13.81□□□□□ -0.2
VEGFA-225ENST00000523950 ITGA4P13612 1032 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms