RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-222ENST00000523555 RAD51AP2Q09MP3 1159 aa10.54□□□□□ -0.72
PABPC1-222ENST00000523555 HYAL1Q12794 435 aa10.54□□□□□ -0.72
PABPC1-222ENST00000523555 PKP1Q13835 747 aa10.54□□□□□ -0.72
PABPC1-222ENST00000523555 TFDP1Q14186 410 aa10.54□□□□□ -0.72
PABPC1-222ENST00000523555 PDCD11Q14690 1871 aaKnown RBP10.54□□□□□ -0.72
PABPC1-222ENST00000523555 PTPROQ16827 1216 aa10.54□□□□□ -0.72
PABPC1-222ENST00000523555 FOXD4L5Q5VV16 416 aaPredicted RBP10.54□□□□□ -0.72
PABPC1-222ENST00000523555 ARL6IP4Q66PJ3 421 aaKnown RBP10.54□□□□□ -0.72
PABPC1-222ENST00000523555 RINT1Q6NUQ1 792 aa10.54□□□□□ -0.72
PABPC1-222ENST00000523555 KCNT2Q6UVM3 1135 aa10.54□□□□□ -0.72
PABPC1-222ENST00000523555 FAM43BQ6ZT52 329 aaPredicted RBP10.54□□□□□ -0.72
PABPC1-222ENST00000523555 C1orf186Q6ZWK4 172 aa10.54□□□□□ -0.72
PABPC1-222ENST00000523555 MRPL10Q7Z7H8 261 aaKnown RBP10.54□□□□□ -0.72
PABPC1-222ENST00000523555 CABP7Q86V35 215 aa10.54□□□□□ -0.72
PABPC1-222ENST00000523555 ZNF280BQ86YH2 543 aa10.54□□□□□ -0.72
PABPC1-222ENST00000523555 ABI1Q8IZP0 508 aa10.54□□□□□ -0.72
PABPC1-222ENST00000523555 LRRC43Q8N309 656 aa10.54□□□□□ -0.72
PABPC1-222ENST00000523555 BCL7CQ8WUZ0 217 aaPredicted RBP10.54□□□□□ -0.72
PABPC1-222ENST00000523555 FOXD4L4Q8WXT5 416 aaPredicted RBP10.54□□□□□ -0.72
PABPC1-222ENST00000523555 CLIC6Q96NY7 704 aa10.54□□□□□ -0.72
PABPC1-222ENST00000523555 ASB2Q96Q27 587 aa10.54□□□□□ -0.72
PABPC1-222ENST00000523555 USP28Q96RU2 1077 aa10.54□□□□□ -0.72
PABPC1-222ENST00000523555 CCDC113Q9H0I3 377 aa10.54□□□□□ -0.72
PABPC1-222ENST00000523555 CXCL16Q9H2A7 254 aa10.54□□□□□ -0.72
PABPC1-222ENST00000523555 FZD8Q9H461 694 aa10.54□□□□□ -0.72
PABPC1-222ENST00000523555 NXF3Q9H4D5 531 aaKnown RBP10.54□□□□□ -0.72
PABPC1-222ENST00000523555 NSUN3Q9H649 340 aaKnown RBP10.54□□□□□ -0.72
PABPC1-222ENST00000523555 NRDE2Q9H7Z3 1164 aa10.54□□□□□ -0.72
PABPC1-222ENST00000523555 TBC1D13Q9NVG8 400 aa10.54□□□□□ -0.72
PABPC1-222ENST00000523555 MIOSQ9NXC5 875 aa10.54□□□□□ -0.72
PABPC1-222ENST00000523555 DNAJB4Q9UDY4 337 aa10.54□□□□□ -0.72
PABPC1-222ENST00000523555 IPPQ9Y573 584 aa10.54□□□□□ -0.72
PABPC1-222ENST00000523555 CITO14578 2027 aa10.53□□□□□ -0.72
PABPC1-222ENST00000523555 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.53□□□□□ -0.72
PABPC1-222ENST00000523555 SFI1A8K8P3 1242 aa10.53□□□□□ -0.72
PABPC1-222ENST00000523555 DLL1O00548 723 aa10.53□□□□□ -0.72
PABPC1-222ENST00000523555 HOXA2O43364 376 aa10.53□□□□□ -0.72
PABPC1-222ENST00000523555 DDHD2O94830 711 aa10.53□□□□□ -0.72
PABPC1-222ENST00000523555 NPTXRO95502 500 aa10.53□□□□□ -0.72
PABPC1-222ENST00000523555 LAG3P18627 525 aa10.53□□□□□ -0.72
PABPC1-222ENST00000523555 LIG1P18858 919 aa10.53□□□□□ -0.72
PABPC1-222ENST00000523555 NCLP19338 710 aaKnown RBP10.53□□□□□ -0.72
PABPC1-222ENST00000523555 PDCP20941 246 aa10.53□□□□□ -0.72
PABPC1-222ENST00000523555 RAB27AP51159 221 aa10.53□□□□□ -0.72
PABPC1-222ENST00000523555 SLC12A3P55017 1021 aa10.53□□□□□ -0.72
PABPC1-222ENST00000523555 RBM10P98175 930 aaKnown RBP10.53□□□□□ -0.72
PABPC1-222ENST00000523555 DLX2Q07687 328 aaPredicted RBP10.53□□□□□ -0.72
PABPC1-222ENST00000523555 KARSQ15046 597 aaKnown RBP10.53□□□□□ -0.72
PABPC1-222ENST00000523555 TIGD5Q53EQ6 642 aa10.53□□□□□ -0.72
PABPC1-222ENST00000523555 TJAP1Q5JTD0 557 aa10.53□□□□□ -0.72
PABPC1-222ENST00000523555 EEF1DP3Q658K8 133 aa10.53□□□□□ -0.72
PABPC1-222ENST00000523555 NOTUMQ6P988 496 aa10.53□□□□□ -0.72
PABPC1-222ENST00000523555 PPP4R3CPQ6ZMV5 832 aa10.53□□□□□ -0.72
PABPC1-222ENST00000523555 TAS1R3Q7RTX0 852 aa10.53□□□□□ -0.72
PABPC1-222ENST00000523555 HSCBQ8IWL3 235 aa10.53□□□□□ -0.72
PABPC1-222ENST00000523555 THNSL1Q8IYQ7 743 aa10.53□□□□□ -0.72
PABPC1-222ENST00000523555 SLC39A11Q8N1S5 342 aa10.53□□□□□ -0.72
PABPC1-222ENST00000523555 ATXN2LQ8WWM7 1075 aaKnown RBP10.53□□□□□ -0.72
PABPC1-222ENST00000523555 ZFP42Q96MM3 310 aa10.53□□□□□ -0.72
PABPC1-222ENST00000523555 NECAB3Q96P71 396 aaPredicted RBP10.53□□□□□ -0.72
PABPC1-222ENST00000523555 APOL6Q9BWW8 343 aa10.53□□□□□ -0.72
PABPC1-222ENST00000523555 LMAN2LQ9H0V9 348 aa10.53□□□□□ -0.72
PABPC1-222ENST00000523555 CSRNP2Q9H175 543 aa10.53□□□□□ -0.72
PABPC1-222ENST00000523555 UBE2ZQ9H832 354 aaPredicted RBP10.53□□□□□ -0.72
PABPC1-222ENST00000523555 RSAD1Q9HA92 442 aa10.53□□□□□ -0.72
PABPC1-222ENST00000523555 BLOC1S4Q9NUP1 217 aa10.53□□□□□ -0.72
PABPC1-222ENST00000523555 FBXO2Q9UK22 296 aaPredicted RBP10.53□□□□□ -0.72
PABPC1-222ENST00000523555 DNM3Q9UQ16 869 aa10.53□□□□□ -0.72
PABPC1-222ENST00000523555 PCDHB12Q9Y5F1 795 aa10.53□□□□□ -0.72
PABPC1-222ENST00000523555 PLXNA3P51805 1871 aa10.53□□□□□ -0.72
PABPC1-222ENST00000523555 A0A1B0GUA9 196 aa10.52□□□□□ -0.73
PABPC1-222ENST00000523555 FSCN2O14926 492 aa10.52□□□□□ -0.73
PABPC1-222ENST00000523555 ZC3H11AO75152 810 aaKnown RBP eCLIP10.52□□□□□ -0.73
PABPC1-222ENST00000523555 POMCP01189 267 aa10.52□□□□□ -0.73
PABPC1-222ENST00000523555 SSBP05455 408 aaKnown RBP eCLIP10.52□□□□□ -0.73
PABPC1-222ENST00000523555 PRKCBP05771 671 aa10.52□□□□□ -0.73
PABPC1-222ENST00000523555 PLA2G4BP0C869 781 aa10.52□□□□□ -0.73
PABPC1-222ENST00000523555 BMP1P13497 986 aa10.52□□□□□ -0.73
PABPC1-222ENST00000523555 AKAP5P24588 427 aa10.52□□□□□ -0.73
PABPC1-222ENST00000523555 AXLP30530 894 aa10.52□□□□□ -0.73
PABPC1-222ENST00000523555 LTBRP36941 435 aa10.52□□□□□ -0.73
PABPC1-222ENST00000523555 NAMPTP43490 491 aa10.52□□□□□ -0.73
PABPC1-222ENST00000523555 PEX3P56589 373 aa10.52□□□□□ -0.73
PABPC1-222ENST00000523555 BCAR1P56945 870 aa10.52□□□□□ -0.73
PABPC1-222ENST00000523555 MRPS5P82675 430 aaKnown RBP10.52□□□□□ -0.73
PABPC1-222ENST00000523555 FAM187BQ17R55 369 aa10.52□□□□□ -0.73
PABPC1-222ENST00000523555 NAALADL2Q58DX5 795 aa10.52□□□□□ -0.73
PABPC1-222ENST00000523555 ARSHQ5FYA8 562 aa10.52□□□□□ -0.73
PABPC1-222ENST00000523555 NOMO2Q5JPE7 1267 aa10.52□□□□□ -0.73
PABPC1-222ENST00000523555 NT5DC1Q5TFE4 455 aa10.52□□□□□ -0.73
PABPC1-222ENST00000523555 SYT2Q8N9I0 419 aaPredicted RBP10.52□□□□□ -0.73
PABPC1-222ENST00000523555 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.52□□□□□ -0.73
PABPC1-222ENST00000523555 HLA-CQ95604 372 aa10.52□□□□□ -0.73
PABPC1-222ENST00000523555 EPSTI1Q96J88 318 aa10.52□□□□□ -0.73
PABPC1-222ENST00000523555 ZNF558Q96NG5 402 aa10.52□□□□□ -0.73
PABPC1-222ENST00000523555 GBP3Q9H0R5 595 aa10.52□□□□□ -0.73
PABPC1-222ENST00000523555 PDZD7Q9H5P4 517 aa10.52□□□□□ -0.73
PABPC1-222ENST00000523555 IGFLR1Q9H665 355 aa10.52□□□□□ -0.73
PABPC1-222ENST00000523555 RNF216Q9NWF9 866 aaPredicted RBP10.52□□□□□ -0.73
PABPC1-222ENST00000523555 CACNG4Q9UBN1 327 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms