RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 DESP17661 470 aa9.02□□□□□ -0.97
CSMD1-213ENST00000523488 BTKQ06187 659 aa9.02□□□□□ -0.97
CSMD1-213ENST00000523488 GFPT1Q06210 699 aaPredicted RBP9.02□□□□□ -0.97
CSMD1-213ENST00000523488 DLGAP5Q15398 846 aa9.02□□□□□ -0.97
CSMD1-213ENST00000523488 SEPT14Q6ZU15 432 aa9.02□□□□□ -0.97
CSMD1-213ENST00000523488 NOP9Q86U38 636 aaKnown RBP9.02□□□□□ -0.97
CSMD1-213ENST00000523488 RNF168Q8IYW5 571 aaPredicted RBP9.02□□□□□ -0.97
CSMD1-213ENST00000523488 RIBC1Q8N443 379 aaPredicted RBP9.02□□□□□ -0.97
CSMD1-213ENST00000523488 PROCA1Q8NCQ7 364 aaPredicted RBP9.02□□□□□ -0.97
CSMD1-213ENST00000523488 NDNQ99608 321 aa9.02□□□□□ -0.97
CSMD1-213ENST00000523488 PRMT1Q99873 361 aaKnown RBP9.02□□□□□ -0.97
CSMD1-213ENST00000523488 ETNK1Q9HBU6 452 aa9.02□□□□□ -0.97
CSMD1-213ENST00000523488 METTL5Q9NRN9 209 aaKnown RBP9.02□□□□□ -0.97
CSMD1-213ENST00000523488 POLIQ9UNA4 740 aa9.02□□□□□ -0.97
CSMD1-213ENST00000523488 CHKBQ9Y259 395 aa9.02□□□□□ -0.97
CSMD1-213ENST00000523488 THRAP3Q9Y2W1 955 aaKnown RBP9.02□□□□□ -0.97
CSMD1-213ENST00000523488 A0A087WZG4 1122 aa9.01□□□□□ -0.97
CSMD1-213ENST00000523488 NBPF26B4DH59 902 aa9.01□□□□□ -0.97
CSMD1-213ENST00000523488 ZBED4O75132 1171 aa9.01□□□□□ -0.97
CSMD1-213ENST00000523488 ADORA1P30542 326 aa9.01□□□□□ -0.97
CSMD1-213ENST00000523488 TBL3Q12788 808 aaKnown RBP9.01□□□□□ -0.97
CSMD1-213ENST00000523488 SLC45A4Q5BKX6 768 aa9.01□□□□□ -0.97
CSMD1-213ENST00000523488 RNF220Q5VTB9 566 aa9.01□□□□□ -0.97
CSMD1-213ENST00000523488 C11orf63Q6NUN7 778 aa9.01□□□□□ -0.97
CSMD1-213ENST00000523488 INTS8Q75QN2 995 aaKnown RBP9.01□□□□□ -0.97
CSMD1-213ENST00000523488 CMTR1Q8N1G2 835 aaKnown RBP9.01□□□□□ -0.97
CSMD1-213ENST00000523488 NEK9Q8TD19 979 aa9.01□□□□□ -0.97
CSMD1-213ENST00000523488 DNAJC9Q8WXX5 260 aa9.01□□□□□ -0.97
CSMD1-213ENST00000523488 PCDH18Q9HCL0 1135 aa9.01□□□□□ -0.97
CSMD1-213ENST00000523488 PACSIN2Q9UNF0 486 aaPredicted RBP9.01□□□□□ -0.97
CSMD1-213ENST00000523488 A8MXQ7 604 aa9.01□□□□□ -0.97
CSMD1-213ENST00000523488 ADAMTS3O15072 1205 aa9.01□□□□□ -0.97
CSMD1-213ENST00000523488 EDIL3O43854 480 aa9.01□□□□□ -0.97
CSMD1-213ENST00000523488 ASMTLO95671 621 aa9.01□□□□□ -0.97
CSMD1-213ENST00000523488 CD48P09326 243 aa9.01□□□□□ -0.97
CSMD1-213ENST00000523488 TRIM42Q8IWZ5 723 aa9.01□□□□□ -0.97
CSMD1-213ENST00000523488 SLC17A8Q8NDX2 589 aa9.01□□□□□ -0.97
CSMD1-213ENST00000523488 CCDC97Q96F63 343 aaPredicted RBP9.01□□□□□ -0.97
CSMD1-213ENST00000523488 NUDCD1Q96RS6 583 aa9.01□□□□□ -0.97
CSMD1-213ENST00000523488 MIPEPQ99797 713 aa9.01□□□□□ -0.97
CSMD1-213ENST00000523488 GPAMQ9HCL2 828 aa9.01□□□□□ -0.97
CSMD1-213ENST00000523488 ARHGEF4Q9NR80 690 aa9.01□□□□□ -0.97
CSMD1-213ENST00000523488 PTTG2Q9NZH5 202 aa9.01□□□□□ -0.97
CSMD1-213ENST00000523488 NDUFA13Q9P0J0 144 aa9.01□□□□□ -0.97
CSMD1-213ENST00000523488 KLHL14Q9P2G3 628 aa9.01□□□□□ -0.97
CSMD1-213ENST00000523488 CEP126Q9P2H0 1117 aa9.01□□□□□ -0.97
CSMD1-213ENST00000523488 UTP11Q9Y3A2 253 aaKnown RBP9.01□□□□□ -0.97
CSMD1-213ENST00000523488 DAPK3O43293 454 aa9.01□□□□□ -0.97
CSMD1-213ENST00000523488 IVDP26440 423 aa9.01□□□□□ -0.97
CSMD1-213ENST00000523488 FXR2P51116 673 aaKnown RBP eCLIP9.01□□□□□ -0.97
CSMD1-213ENST00000523488 CLPPQ16740 277 aaPredicted RBP9.01□□□□□ -0.97
CSMD1-213ENST00000523488 SOGA3Q5TF21 947 aa9.01□□□□□ -0.97
CSMD1-213ENST00000523488 DENND2CQ68D51 928 aa9.01□□□□□ -0.97
CSMD1-213ENST00000523488 LSM14AQ8ND56 463 aaKnown RBP9.01□□□□□ -0.97
CSMD1-213ENST00000523488 FMO2Q99518 471 aa9.01□□□□□ -0.97
CSMD1-213ENST00000523488 AP1M1Q9BXS5 423 aa9.01□□□□□ -0.97
CSMD1-213ENST00000523488 BHMT2Q9H2M3 363 aa9.01□□□□□ -0.97
CSMD1-213ENST00000523488 KCTD10Q9H3F6 313 aa9.01□□□□□ -0.97
CSMD1-213ENST00000523488 STK17AQ9UEE5 414 aa9.01□□□□□ -0.97
CSMD1-213ENST00000523488 PNMA3Q9UL41 463 aa9.01□□□□□ -0.97
CSMD1-213ENST00000523488 PADI4Q9UM07 663 aa9.01□□□□□ -0.97
CSMD1-213ENST00000523488 PCDHA6Q9UN73 950 aa9.01□□□□□ -0.97
CSMD1-213ENST00000523488 DOCK5Q9H7D0 1870 aa9.01□□□□□ -0.97
CSMD1-213ENST00000523488 SMIM31A0A1B0GVY4 71 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 KANSL1LA0AUZ9 987 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 KRIT1O00522 736 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 CASQ2O14958 399 aaPredicted RBP9□□□□□ -0.97
CSMD1-213ENST00000523488 SKIP12755 728 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 SMARCA1P28370 1054 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 MAPK7Q13164 816 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 SLC39A6Q13433 755 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 MPP2Q14168 576 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 TOM1L2Q6ZVM7 507 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 UHMK1Q8TAS1 419 aaKnown RBP9□□□□□ -0.97
CSMD1-213ENST00000523488 MTMR9Q96QG7 549 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 ORAI2Q96SN7 254 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 BLOC1S4Q9NUP1 217 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 KANSL3Q9P2N6 904 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 TUBGCP4Q9UGJ1 667 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 PARP2Q9UGN5 583 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 PLA2G4CQ9UP65 541 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 ATP5J2-PTCD1G3V325 749 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 C2CD2LO14523 706 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 GNA14O95837 355 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 SERPINB4P48594 390 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 PLOD1Q02809 727 aaPredicted RBP9□□□□□ -0.97
CSMD1-213ENST00000523488 ARID5AQ03989 594 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 STK4Q13043 487 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 PTPROQ16827 1216 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 BICDL1Q6ZP65 573 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 PASD1Q8IV76 773 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 PPFIBP2Q8ND30 876 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 WDR66Q8TBY9 1149 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 PUS3Q9BZE2 481 aaKnown RBP9□□□□□ -0.97
CSMD1-213ENST00000523488 MIS12Q9H081 205 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 ZMYND12Q9H0C1 365 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 RANBP17Q9H2T7 1088 aaKnown RBP9□□□□□ -0.97
CSMD1-213ENST00000523488 DENND2DQ9H6A0 471 aaPredicted RBP9□□□□□ -0.97
CSMD1-213ENST00000523488 KCNK9Q9NPC2 374 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 PRDM11Q9NQV5 511 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms