RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 NFKBIZQ9BYH8 718 aa18.02■□□□□ 0.48
CLN8-206ENST00000523237 RAB34Q9BZG1 259 aa18.02■□□□□ 0.48
CLN8-206ENST00000523237 NGRNQ9NPE2 291 aaKnown RBP18.02■□□□□ 0.48
CLN8-206ENST00000523237 TBC1D13Q9NVG8 400 aa18.02■□□□□ 0.48
CLN8-206ENST00000523237 CNTNAP2Q9UHC6 1331 aa18.01■□□□□ 0.47
CLN8-206ENST00000523237 PER2O15055 1255 aa18.01■□□□□ 0.47
CLN8-206ENST00000523237 MBTPS2O43462 519 aa18.01■□□□□ 0.47
CLN8-206ENST00000523237 CD2BP2O95400 341 aaKnown RBP18.01■□□□□ 0.47
CLN8-206ENST00000523237 NCLP19338 710 aaKnown RBP18.01■□□□□ 0.47
CLN8-206ENST00000523237 SSTR3P32745 418 aaPredicted RBP18.01■□□□□ 0.47
CLN8-206ENST00000523237 MBTD1Q05BQ5 628 aa18.01■□□□□ 0.47
CLN8-206ENST00000523237 SMAD4Q13485 552 aaKnown RBP18.01■□□□□ 0.47
CLN8-206ENST00000523237 DUSP6Q16828 381 aa18.01■□□□□ 0.47
CLN8-206ENST00000523237 MCTP1Q6DN14 999 aa18.01■□□□□ 0.47
CLN8-206ENST00000523237 AGMOQ6ZNB7 445 aa18.01■□□□□ 0.47
CLN8-206ENST00000523237 TMC7Q7Z402 723 aa18.01■□□□□ 0.47
CLN8-206ENST00000523237 GJD3Q8N144 294 aa18.01■□□□□ 0.47
CLN8-206ENST00000523237 TMEM169Q96HH4 297 aa18.01■□□□□ 0.47
CLN8-206ENST00000523237 RSAD1Q9HA92 442 aa18.01■□□□□ 0.47
CLN8-206ENST00000523237 UBN1Q9NPG3 1134 aa18.01■□□□□ 0.47
CLN8-206ENST00000523237 LRWD1Q9UFC0 647 aa18.01■□□□□ 0.47
CLN8-206ENST00000523237 PRKAG3Q9UGI9 489 aa18.01■□□□□ 0.47
CLN8-206ENST00000523237 PCDHB6Q9Y5E3 794 aa18.01■□□□□ 0.47
CLN8-206ENST00000523237 STK24Q9Y6E0 443 aa18.01■□□□□ 0.47
CLN8-206ENST00000523237 ARHGEF35A5YM69 484 aa18■□□□□ 0.47
CLN8-206ENST00000523237 NT5C1B-RDH14C9J2C7 533 aa18■□□□□ 0.47
CLN8-206ENST00000523237 LAD1O00515 517 aa18■□□□□ 0.47
CLN8-206ENST00000523237 GLP2RO95838 553 aa18■□□□□ 0.47
CLN8-206ENST00000523237 GJB2P29033 226 aa18■□□□□ 0.47
CLN8-206ENST00000523237 CCT6AP40227 531 aaKnown RBP18■□□□□ 0.47
CLN8-206ENST00000523237 TOB1P50616 345 aaPredicted RBP18■□□□□ 0.47
CLN8-206ENST00000523237 PTGDRQ13258 359 aa18■□□□□ 0.47
CLN8-206ENST00000523237 PDIA5Q14554 519 aa18■□□□□ 0.47
CLN8-206ENST00000523237 BMS1Q14692 1282 aaKnown RBP18■□□□□ 0.47
CLN8-206ENST00000523237 SMAD2Q15796 467 aaKnown RBP18■□□□□ 0.47
CLN8-206ENST00000523237 MAEAQ7L5Y9 396 aa18■□□□□ 0.47
CLN8-206ENST00000523237 CPB2Q96IY4 423 aa18■□□□□ 0.47
CLN8-206ENST00000523237 MSLNLQ96KJ4 702 aa18■□□□□ 0.47
CLN8-206ENST00000523237 C1QTNF1Q9BXJ1 281 aa18■□□□□ 0.47
CLN8-206ENST00000523237 CSRNP2Q9H175 543 aa18■□□□□ 0.47
CLN8-206ENST00000523237 NRDE2Q9H7Z3 1164 aa18■□□□□ 0.47
CLN8-206ENST00000523237 CD320Q9NPF0 282 aa18■□□□□ 0.47
CLN8-206ENST00000523237 GPRC5CQ9NQ84 441 aa18■□□□□ 0.47
CLN8-206ENST00000523237 CLEC1BQ9P126 229 aa18■□□□□ 0.47
CLN8-206ENST00000523237 KANSL3Q9P2N6 904 aa18■□□□□ 0.47
CLN8-206ENST00000523237 LRRIQ4A6NIV6 560 aa17.99■□□□□ 0.47
CLN8-206ENST00000523237 H3BQV1 296 aa17.99■□□□□ 0.47
CLN8-206ENST00000523237 SRGAP2BP0DMP2 458 aa17.99■□□□□ 0.47
CLN8-206ENST00000523237 ITGA4P13612 1032 aa17.99■□□□□ 0.47
CLN8-206ENST00000523237 COASYQ13057 564 aa17.99■□□□□ 0.47
CLN8-206ENST00000523237 SMC1AQ14683 1233 aaKnown RBP17.99■□□□□ 0.47
CLN8-206ENST00000523237 PADI6Q6TGC4 694 aa17.99■□□□□ 0.47
CLN8-206ENST00000523237 ADHFE1Q8IWW8 467 aa17.99■□□□□ 0.47
CLN8-206ENST00000523237 GBP3Q9H0R5 595 aa17.99■□□□□ 0.47
CLN8-206ENST00000523237 BARX2Q9UMQ3 279 aaPredicted RBP17.99■□□□□ 0.47
CLN8-206ENST00000523237 TDRD15B5MCY1 1934 aaKnown RBP17.99■□□□□ 0.47
CLN8-206ENST00000523237 EYA4O95677 639 aa17.98■□□□□ 0.47
CLN8-206ENST00000523237 GALTP07902 379 aa17.98■□□□□ 0.47
CLN8-206ENST00000523237 ARF4P18085 180 aaPredicted RBP17.98■□□□□ 0.47
CLN8-206ENST00000523237 CYP11B2P19099 503 aa17.98■□□□□ 0.47
CLN8-206ENST00000523237 PRPHP41219 470 aa17.98■□□□□ 0.47
CLN8-206ENST00000523237 ZP2Q05996 745 aa17.98■□□□□ 0.47
CLN8-206ENST00000523237 AMHR2Q16671 573 aa17.98■□□□□ 0.47
CLN8-206ENST00000523237 RILPL1Q5EBL4 403 aa17.98■□□□□ 0.47
CLN8-206ENST00000523237 ZBTB8OSQ8IWT0 167 aa17.98■□□□□ 0.47
CLN8-206ENST00000523237 HACE1Q8IYU2 909 aa17.98■□□□□ 0.47
CLN8-206ENST00000523237 IGSF22Q8N9C0 903 aa17.98■□□□□ 0.47
CLN8-206ENST00000523237 SMRP1Q8NCR6 262 aa17.98■□□□□ 0.47
CLN8-206ENST00000523237 SMG8Q8ND04 991 aaKnown RBP17.98■□□□□ 0.47
CLN8-206ENST00000523237 IGSF21Q96ID5 467 aa17.98■□□□□ 0.47
CLN8-206ENST00000523237 FAM193BQ96PV7 902 aaPredicted RBP17.98■□□□□ 0.47
CLN8-206ENST00000523237 POP1Q99575 1024 aaKnown RBP17.98■□□□□ 0.47
CLN8-206ENST00000523237 EIF2AQ9BY44 585 aaKnown RBP17.98■□□□□ 0.47
CLN8-206ENST00000523237 TRIM6Q9C030 488 aaPredicted RBP17.98■□□□□ 0.47
CLN8-206ENST00000523237 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.98■□□□□ 0.47
CLN8-206ENST00000523237 SMC3Q9UQE7 1217 aa17.98■□□□□ 0.47
CLN8-206ENST00000523237 IPPQ9Y573 584 aa17.98■□□□□ 0.47
CLN8-206ENST00000523237 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.98■□□□□ 0.47
CLN8-206ENST00000523237 HIDE1A8MVS5 230 aa17.97■□□□□ 0.47
CLN8-206ENST00000523237 SLC27A1Q6PCB7 646 aa17.97■□□□□ 0.47
CLN8-206ENST00000523237 ZNF280BQ86YH2 543 aa17.97■□□□□ 0.47
CLN8-206ENST00000523237 MRPL43Q8N983 215 aaKnown RBP17.97■□□□□ 0.47
CLN8-206ENST00000523237 SNX29Q8TEQ0 813 aa17.97■□□□□ 0.47
CLN8-206ENST00000523237 PRIMPOLQ96LW4 560 aa17.97■□□□□ 0.47
CLN8-206ENST00000523237 C2orf40Q9H1Z8 148 aa17.97■□□□□ 0.47
CLN8-206ENST00000523237 EPHX3Q9H6B9 360 aa17.97■□□□□ 0.47
CLN8-206ENST00000523237 DDX19AQ9NUU7 478 aaKnown RBP17.97■□□□□ 0.47
CLN8-206ENST00000523237 PRMT7Q9NVM4 692 aaPredicted RBP17.97■□□□□ 0.47
CLN8-206ENST00000523237 DNAJB4Q9UDY4 337 aa17.97■□□□□ 0.47
CLN8-206ENST00000523237 STK39Q9UEW8 545 aa17.97■□□□□ 0.47
CLN8-206ENST00000523237 KIAA1024Q9UPX6 916 aa17.97■□□□□ 0.47
CLN8-206ENST00000523237 B4GALT5O43286 388 aa17.96■□□□□ 0.47
CLN8-206ENST00000523237 POMCP01189 267 aa17.96■□□□□ 0.47
CLN8-206ENST00000523237 CA8P35219 290 aa17.96■□□□□ 0.47
CLN8-206ENST00000523237 SLC11A1P49279 550 aa17.96■□□□□ 0.47
CLN8-206ENST00000523237 AFF1P51825 1210 aaKnown RBP17.96■□□□□ 0.47
CLN8-206ENST00000523237 PPP2R5AQ15172 486 aa17.96■□□□□ 0.47
CLN8-206ENST00000523237 ECM1Q16610 540 aa17.96■□□□□ 0.47
CLN8-206ENST00000523237 KRT79Q5XKE5 535 aa17.96■□□□□ 0.47
CLN8-206ENST00000523237 CDCA2Q69YH5 1023 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms