RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 TMX3Q96JJ7 454 aa13.76□□□□□ -0.21
VEGFA-223ENST00000523125 TCF25Q9BQ70 676 aa13.76□□□□□ -0.21
VEGFA-223ENST00000523125 NFKBIZQ9BYH8 718 aa13.76□□□□□ -0.21
VEGFA-223ENST00000523125 GPRC5CQ9NQ84 441 aa13.76□□□□□ -0.21
VEGFA-223ENST00000523125 DNAJB4Q9UDY4 337 aa13.76□□□□□ -0.21
VEGFA-223ENST00000523125 PUF60Q9UHX1 559 aaKnown RBP13.76□□□□□ -0.21
VEGFA-223ENST00000523125 DBR1Q9UK59 544 aaKnown RBP13.76□□□□□ -0.21
VEGFA-223ENST00000523125 BARX2Q9UMQ3 279 aaPredicted RBP13.76□□□□□ -0.21
VEGFA-223ENST00000523125 TRIP11Q15643 1979 aa13.76□□□□□ -0.21
VEGFA-223ENST00000523125 MYH11P35749 1972 aa13.75□□□□□ -0.21
VEGFA-223ENST00000523125 PI4K2BG5E9Z4 385 aa13.75□□□□□ -0.21
VEGFA-223ENST00000523125 ST18O60284 1047 aa13.75□□□□□ -0.21
VEGFA-223ENST00000523125 USO1O60763 962 aaKnown RBP13.75□□□□□ -0.21
VEGFA-223ENST00000523125 ZC3H11AO75152 810 aaKnown RBP eCLIP13.75□□□□□ -0.21
VEGFA-223ENST00000523125 GALTP07902 379 aa13.75□□□□□ -0.21
VEGFA-223ENST00000523125 NCLP19338 710 aaKnown RBP13.75□□□□□ -0.21
VEGFA-223ENST00000523125 FXR2P51116 673 aaKnown RBP eCLIP13.75□□□□□ -0.21
VEGFA-223ENST00000523125 TFDP1Q14186 410 aa13.75□□□□□ -0.21
VEGFA-223ENST00000523125 PCBP1Q15365 356 aaKnown RBP eCLIP13.75□□□□□ -0.214e-7■■□□□ 11.7
VEGFA-223ENST00000523125 ECM1Q16610 540 aa13.75□□□□□ -0.21
VEGFA-223ENST00000523125 TMEM184AQ6ZMB5 413 aa13.75□□□□□ -0.21
VEGFA-223ENST00000523125 ZNF280BQ86YH2 543 aa13.75□□□□□ -0.21
VEGFA-223ENST00000523125 MRPL43Q8N983 215 aaKnown RBP13.75□□□□□ -0.21
VEGFA-223ENST00000523125 BCL7CQ8WUZ0 217 aaPredicted RBP13.75□□□□□ -0.21
VEGFA-223ENST00000523125 PGBD4Q96DM1 585 aa13.75□□□□□ -0.21
VEGFA-223ENST00000523125 CPB2Q96IY4 423 aa13.75□□□□□ -0.21
VEGFA-223ENST00000523125 NACC1Q96RE7 527 aa13.75□□□□□ -0.21
VEGFA-223ENST00000523125 CDCA3Q99618 268 aaPredicted RBP13.75□□□□□ -0.21
VEGFA-223ENST00000523125 EIF2AQ9BY44 585 aaKnown RBP13.75□□□□□ -0.21
VEGFA-223ENST00000523125 POLR3FQ9H1D9 316 aaPredicted RBP13.75□□□□□ -0.21
VEGFA-223ENST00000523125 NGRNQ9NPE2 291 aaKnown RBP13.75□□□□□ -0.21
VEGFA-223ENST00000523125 C11orf16Q9NQ32 467 aa13.75□□□□□ -0.21
VEGFA-223ENST00000523125 ENTPD7Q9NQZ7 604 aa13.75□□□□□ -0.21
VEGFA-223ENST00000523125 INPP5FQ9Y2H2 1132 aa13.75□□□□□ -0.21
VEGFA-223ENST00000523125 PCDHB6Q9Y5E3 794 aa13.75□□□□□ -0.21
VEGFA-223ENST00000523125 CNTNAP2Q9UHC6 1331 aa13.74□□□□□ -0.21
VEGFA-223ENST00000523125 C2orf71A6NGG8 1288 aa13.74□□□□□ -0.21
VEGFA-223ENST00000523125 INO80B-WBP1J3KQ70 363 aa13.74□□□□□ -0.21
VEGFA-223ENST00000523125 DDHD2O94830 711 aa13.74□□□□□ -0.21
VEGFA-223ENST00000523125 ERLIN2O94905 339 aa13.74□□□□□ -0.21
VEGFA-223ENST00000523125 ARF4P18085 180 aaPredicted RBP13.74□□□□□ -0.21
VEGFA-223ENST00000523125 AXLP30530 894 aa13.74□□□□□ -0.21
VEGFA-223ENST00000523125 SSTR3P32745 418 aaPredicted RBP13.74□□□□□ -0.21
VEGFA-223ENST00000523125 PTGDRQ13258 359 aa13.74□□□□□ -0.21
VEGFA-223ENST00000523125 GNL2Q13823 731 aaKnown RBP13.74□□□□□ -0.21
VEGFA-223ENST00000523125 IL17AQ16552 155 aa13.74□□□□□ -0.21
VEGFA-223ENST00000523125 MAEAQ7L5Y9 396 aa13.74□□□□□ -0.21
VEGFA-223ENST00000523125 TMC7Q7Z402 723 aa13.74□□□□□ -0.21
VEGFA-223ENST00000523125 IGSF21Q96ID5 467 aa13.74□□□□□ -0.21
VEGFA-223ENST00000523125 CCDC43Q96MW1 224 aaKnown RBP13.74□□□□□ -0.21
VEGFA-223ENST00000523125 VN1R3Q9BXE9 311 aa13.74□□□□□ -0.21
VEGFA-223ENST00000523125 C1QTNF1Q9BXJ1 281 aa13.74□□□□□ -0.21
VEGFA-223ENST00000523125 CSRNP2Q9H175 543 aa13.74□□□□□ -0.21
VEGFA-223ENST00000523125 RNF39Q9H2S5 420 aa13.74□□□□□ -0.21
VEGFA-223ENST00000523125 RSAD1Q9HA92 442 aa13.74□□□□□ -0.21
VEGFA-223ENST00000523125 NOL7Q9UMY1 257 aaKnown RBP13.74□□□□□ -0.21
VEGFA-223ENST00000523125 IPPQ9Y573 584 aa13.74□□□□□ -0.21
VEGFA-223ENST00000523125 FSD2A1L4K1 749 aa13.73□□□□□ -0.21
VEGFA-223ENST00000523125 INPPL1O15357 1258 aa13.73□□□□□ -0.21
VEGFA-223ENST00000523125 B4GALT5O43286 388 aa13.73□□□□□ -0.21
VEGFA-223ENST00000523125 COL9A1P20849 921 aa13.73□□□□□ -0.21
VEGFA-223ENST00000523125 MUTP22033 750 aa13.73□□□□□ -0.21
VEGFA-223ENST00000523125 SLC11A1P49279 550 aa13.73□□□□□ -0.21
VEGFA-223ENST00000523125 RNASELQ05823 741 aaKnown RBP13.73□□□□□ -0.21
VEGFA-223ENST00000523125 PDIA5Q14554 519 aa13.73□□□□□ -0.21
VEGFA-223ENST00000523125 SMC1AQ14683 1233 aaKnown RBP13.73□□□□□ -0.21
VEGFA-223ENST00000523125 NOTUMQ6P988 496 aa13.73□□□□□ -0.21
VEGFA-223ENST00000523125 PADI6Q6TGC4 694 aa13.73□□□□□ -0.21
VEGFA-223ENST00000523125 DDX53Q86TM3 631 aaKnown RBP13.73□□□□□ -0.21
VEGFA-223ENST00000523125 IGSF22Q8N9C0 903 aa13.73□□□□□ -0.21
VEGFA-223ENST00000523125 CNNM3Q8NE01 707 aa13.73□□□□□ -0.21
VEGFA-223ENST00000523125 MCPH1Q8NEM0 835 aa13.73□□□□□ -0.21
VEGFA-223ENST00000523125 ERMNQ8TAM6 284 aa13.73□□□□□ -0.21
VEGFA-223ENST00000523125 BSNDQ8WZ55 320 aa13.73□□□□□ -0.21
VEGFA-223ENST00000523125 CCDC51Q96ER9 411 aa13.73□□□□□ -0.21
VEGFA-223ENST00000523125 TMEM169Q96HH4 297 aa13.73□□□□□ -0.21
VEGFA-223ENST00000523125 TBC1D32Q96NH3 1257 aa13.73□□□□□ -0.21
VEGFA-223ENST00000523125 USP15Q9Y4E8 981 aaPredicted RBP13.73□□□□□ -0.21
VEGFA-223ENST00000523125 HES2Q9Y543 173 aa13.73□□□□□ -0.21
VEGFA-223ENST00000523125 PLXNA3P51805 1871 aa13.72□□□□□ -0.21
VEGFA-223ENST00000523125 A0A1B0GUA9 196 aa13.72□□□□□ -0.21
VEGFA-223ENST00000523125 ARL5CA6NH57 179 aa13.72□□□□□ -0.21
VEGFA-223ENST00000523125 LRRIQ4A6NIV6 560 aa13.72□□□□□ -0.21
VEGFA-223ENST00000523125 TTLL13PA6NNM8 815 aa13.72□□□□□ -0.21
VEGFA-223ENST00000523125 CXCL14O95715 111 aa13.72□□□□□ -0.21
VEGFA-223ENST00000523125 ITGA4P13612 1032 aa13.72□□□□□ -0.21
VEGFA-223ENST00000523125 CYP11B2P19099 503 aa13.72□□□□□ -0.21
VEGFA-223ENST00000523125 CCT6AP40227 531 aaKnown RBP13.72□□□□□ -0.21
VEGFA-223ENST00000523125 CDCA2Q69YH5 1023 aaPredicted RBP13.72□□□□□ -0.21
VEGFA-223ENST00000523125 SYCE2Q6PIF2 218 aa13.72□□□□□ -0.21
VEGFA-223ENST00000523125 CDR2LQ86X02 465 aaPredicted RBP13.72□□□□□ -0.21
VEGFA-223ENST00000523125 VPS52Q8N1B4 723 aa13.72□□□□□ -0.21
VEGFA-223ENST00000523125 URGCPQ8TCY9 931 aa13.72□□□□□ -0.21
VEGFA-223ENST00000523125 AUTS2Q8WXX7 1259 aa13.72□□□□□ -0.21
VEGFA-223ENST00000523125 SUSD6Q92537 303 aa13.72□□□□□ -0.21
VEGFA-223ENST00000523125 LRFN3Q9BTN0 628 aa13.72□□□□□ -0.21
VEGFA-223ENST00000523125 GBP3Q9H0R5 595 aa13.72□□□□□ -0.21
VEGFA-223ENST00000523125 ZBP1Q9H171 429 aa13.72□□□□□ -0.21
VEGFA-223ENST00000523125 S1PR5Q9H228 398 aa13.72□□□□□ -0.21
VEGFA-223ENST00000523125 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms