RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 MRPL43Q8N983 215 aaKnown RBP11.41□□□□□ -0.58
CTNNA1-235ENST00000522730 URGCPQ8TCY9 931 aa11.41□□□□□ -0.58
CTNNA1-235ENST00000522730 CDCA3Q99618 268 aaPredicted RBP11.41□□□□□ -0.58
CTNNA1-235ENST00000522730 APOL6Q9BWW8 343 aa11.41□□□□□ -0.58
CTNNA1-235ENST00000522730 NRDE2Q9H7Z3 1164 aa11.41□□□□□ -0.58
CTNNA1-235ENST00000522730 TSHZ2Q9NRE2 1034 aa11.41□□□□□ -0.58
CTNNA1-235ENST00000522730 AGPAT5Q9NUQ2 364 aa11.41□□□□□ -0.58
CTNNA1-235ENST00000522730 TBC1D13Q9NVG8 400 aa11.41□□□□□ -0.58
CTNNA1-235ENST00000522730 DNAJB4Q9UDY4 337 aa11.41□□□□□ -0.58
CTNNA1-235ENST00000522730 CIZ1Q9ULV3 898 aaPredicted RBP11.41□□□□□ -0.58
CTNNA1-235ENST00000522730 KIAA1671Q9BY89 1806 aa11.41□□□□□ -0.58
CTNNA1-235ENST00000522730 PLXNA4Q9HCM2 1894 aa11.4□□□□□ -0.58
CTNNA1-235ENST00000522730 INO80B-WBP1J3KQ70 363 aa11.4□□□□□ -0.58
CTNNA1-235ENST00000522730 SSBP05455 408 aaKnown RBP eCLIP11.4□□□□□ -0.58
CTNNA1-235ENST00000522730 RAB27AP51159 221 aa11.4□□□□□ -0.58
CTNNA1-235ENST00000522730 AFF1P51825 1210 aaKnown RBP11.4□□□□□ -0.58
CTNNA1-235ENST00000522730 TFDP1Q14186 410 aa11.4□□□□□ -0.58
CTNNA1-235ENST00000522730 ANKRD54Q6NXT1 300 aa11.4□□□□□ -0.58
CTNNA1-235ENST00000522730 ZNF280BQ86YH2 543 aa11.4□□□□□ -0.58
CTNNA1-235ENST00000522730 FAM184AQ8NB25 1140 aa11.4□□□□□ -0.58
CTNNA1-235ENST00000522730 SMRP1Q8NCR6 262 aa11.4□□□□□ -0.58
CTNNA1-235ENST00000522730 CPB2Q96IY4 423 aa11.4□□□□□ -0.58
CTNNA1-235ENST00000522730 C8orf76Q96K31 380 aa11.4□□□□□ -0.58
CTNNA1-235ENST00000522730 HSD17B14Q9BPX1 270 aa11.4□□□□□ -0.58
CTNNA1-235ENST00000522730 TMEM60Q9H2L4 133 aa11.4□□□□□ -0.58
CTNNA1-235ENST00000522730 PPME1Q9Y570 386 aa11.4□□□□□ -0.58
CTNNA1-235ENST00000522730 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.39□□□□□ -0.59
CTNNA1-235ENST00000522730 C2orf71A6NGG8 1288 aa11.39□□□□□ -0.59
CTNNA1-235ENST00000522730 POTEMA6NI47 508 aa11.39□□□□□ -0.59
CTNNA1-235ENST00000522730 PRR33A8MZF0 331 aa11.39□□□□□ -0.59
CTNNA1-235ENST00000522730 CLASP2O75122 1294 aaKnown RBP11.39□□□□□ -0.59
CTNNA1-235ENST00000522730 ZNF623O75123 536 aa11.39□□□□□ -0.59
CTNNA1-235ENST00000522730 ALDH2P05091 517 aa11.39□□□□□ -0.59
CTNNA1-235ENST00000522730 GALTP07902 379 aa11.39□□□□□ -0.59
CTNNA1-235ENST00000522730 WEE2P0C1S8 567 aa11.39□□□□□ -0.59
CTNNA1-235ENST00000522730 ITGA4P13612 1032 aa11.39□□□□□ -0.59
CTNNA1-235ENST00000522730 LIG1P18858 919 aa11.39□□□□□ -0.59
CTNNA1-235ENST00000522730 HOXA11P31270 313 aaPredicted RBP11.39□□□□□ -0.59
CTNNA1-235ENST00000522730 SLC11A1P49279 550 aa11.39□□□□□ -0.59
CTNNA1-235ENST00000522730 ST3GAL1Q11201 340 aa11.39□□□□□ -0.59
CTNNA1-235ENST00000522730 MXD4Q14582 209 aaPredicted RBP11.39□□□□□ -0.59
CTNNA1-235ENST00000522730 KANK3Q6NY19 840 aa11.39□□□□□ -0.59
CTNNA1-235ENST00000522730 AGMOQ6ZNB7 445 aa11.39□□□□□ -0.59
CTNNA1-235ENST00000522730 TMEM173Q86WV6 379 aaPredicted RBP11.39□□□□□ -0.59
CTNNA1-235ENST00000522730 CDR2LQ86X02 465 aaPredicted RBP11.39□□□□□ -0.59
CTNNA1-235ENST00000522730 C12orf76Q8N812 135 aaPredicted RBP11.39□□□□□ -0.59
CTNNA1-235ENST00000522730 ASAP3Q8TDY4 903 aa11.39□□□□□ -0.59
CTNNA1-235ENST00000522730 IGSF21Q96ID5 467 aa11.39□□□□□ -0.59
CTNNA1-235ENST00000522730 MTMR9Q96QG7 549 aa11.39□□□□□ -0.59
CTNNA1-235ENST00000522730 TRAIPQ9BWF2 469 aa11.39□□□□□ -0.59
CTNNA1-235ENST00000522730 PHF7Q9BWX1 381 aaPredicted RBP11.39□□□□□ -0.59
CTNNA1-235ENST00000522730 EIF2AQ9BY44 585 aaKnown RBP11.39□□□□□ -0.59
CTNNA1-235ENST00000522730 XPNPEP1Q9NQW7 623 aa11.39□□□□□ -0.59
CTNNA1-235ENST00000522730 ANKEF1Q9NU02 776 aa11.39□□□□□ -0.59
CTNNA1-235ENST00000522730 CDH22Q9UJ99 828 aa11.39□□□□□ -0.59
CTNNA1-235ENST00000522730 FAN1Q9Y2M0 1017 aa11.39□□□□□ -0.59
CTNNA1-235ENST00000522730 HES2Q9Y543 173 aa11.39□□□□□ -0.59
CTNNA1-235ENST00000522730 ATG2AQ2TAZ0 1938 aa11.39□□□□□ -0.59
CTNNA1-235ENST00000522730 FSD2A1L4K1 749 aa11.38□□□□□ -0.59
CTNNA1-235ENST00000522730 GAS2O43903 313 aaKnown RBP11.38□□□□□ -0.59
CTNNA1-235ENST00000522730 USO1O60763 962 aaKnown RBP11.38□□□□□ -0.59
CTNNA1-235ENST00000522730 DDHD2O94830 711 aa11.38□□□□□ -0.59
CTNNA1-235ENST00000522730 PTENP60484 403 aa11.38□□□□□ -0.59
CTNNA1-235ENST00000522730 TMEM132AQ24JP5 1023 aa11.38□□□□□ -0.59
CTNNA1-235ENST00000522730 UBXN11Q5T124 520 aa11.38□□□□□ -0.59
CTNNA1-235ENST00000522730 RARS2Q5T160 578 aaKnown RBP11.38□□□□□ -0.59
CTNNA1-235ENST00000522730 CES5AQ6NT32 575 aa11.38□□□□□ -0.59
CTNNA1-235ENST00000522730 SYCE2Q6PIF2 218 aa11.38□□□□□ -0.59
CTNNA1-235ENST00000522730 MRPL10Q7Z7H8 261 aaKnown RBP11.38□□□□□ -0.59
CTNNA1-235ENST00000522730 DDX53Q86TM3 631 aaKnown RBP11.38□□□□□ -0.59
CTNNA1-235ENST00000522730 BCL7CQ8WUZ0 217 aaPredicted RBP11.38□□□□□ -0.59
CTNNA1-235ENST00000522730 CASP10Q92851 521 aa11.38□□□□□ -0.59
CTNNA1-235ENST00000522730 BACH2Q9BYV9 841 aa11.38□□□□□ -0.59
CTNNA1-235ENST00000522730 TRIM6Q9C030 488 aaPredicted RBP11.38□□□□□ -0.59
CTNNA1-235ENST00000522730 POLR3FQ9H1D9 316 aaPredicted RBP11.38□□□□□ -0.59
CTNNA1-235ENST00000522730 S1PR5Q9H228 398 aa11.38□□□□□ -0.59
CTNNA1-235ENST00000522730 RSAD1Q9HA92 442 aa11.38□□□□□ -0.59
CTNNA1-235ENST00000522730 POLD4Q9HCU8 107 aa11.38□□□□□ -0.59
CTNNA1-235ENST00000522730 GPRC5CQ9NQ84 441 aa11.38□□□□□ -0.59
CTNNA1-235ENST00000522730 PRG3Q9Y2Y8 225 aaPredicted RBP11.38□□□□□ -0.59
CTNNA1-235ENST00000522730 HCFC2Q9Y5Z7 792 aa11.38□□□□□ -0.59
CTNNA1-235ENST00000522730 LRRIQ4A6NIV6 560 aa11.37□□□□□ -0.59
CTNNA1-235ENST00000522730 LOC730098B7Z3J9 87 aa11.37□□□□□ -0.59
CTNNA1-235ENST00000522730 C2CD2LO14523 706 aa11.37□□□□□ -0.59
CTNNA1-235ENST00000522730 B4GALT3O60512 393 aa11.37□□□□□ -0.59
CTNNA1-235ENST00000522730 TSPAN1O60635 241 aa11.37□□□□□ -0.59
CTNNA1-235ENST00000522730 MED24O75448 989 aa11.37□□□□□ -0.59
CTNNA1-235ENST00000522730 DGAT1O75907 488 aa11.37□□□□□ -0.59
CTNNA1-235ENST00000522730 MYBP10242 640 aa11.37□□□□□ -0.59
CTNNA1-235ENST00000522730 HOXB8P17481 243 aaPredicted RBP11.37□□□□□ -0.59
CTNNA1-235ENST00000522730 GLRA2P23416 452 aa11.37□□□□□ -0.59
CTNNA1-235ENST00000522730 AKAP5P24588 427 aa11.37□□□□□ -0.59
CTNNA1-235ENST00000522730 ARL2P36404 184 aa11.37□□□□□ -0.59
CTNNA1-235ENST00000522730 PLA2G5P39877 138 aa11.37□□□□□ -0.59
CTNNA1-235ENST00000522730 OR1G1P47890 313 aa11.37□□□□□ -0.59
CTNNA1-235ENST00000522730 RARRES1P49788 294 aa11.37□□□□□ -0.59
CTNNA1-235ENST00000522730 CAPSQ13938 189 aa11.37□□□□□ -0.59
CTNNA1-235ENST00000522730 GSE1Q14687 1217 aa11.37□□□□□ -0.59
CTNNA1-235ENST00000522730 CBX2Q14781 532 aaPredicted RBP11.37□□□□□ -0.59
CTNNA1-235ENST00000522730 TPRNQ4KMQ1 711 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms