RNA–Protein interactions for RNA: ENST00000522456.1

HOXA3-205, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-205ENST00000522456 CSPG5O95196 566 aa24.23■■□□□ 1.47
HOXA3-205ENST00000522456 PTENP60484 403 aa24.23■■□□□ 1.47
HOXA3-205ENST00000522456 KRI1Q8N9T8 703 aaKnown RBP24.23■■□□□ 1.47
HOXA3-205ENST00000522456 LINC00301Q8NCQ3 95 aa24.23■■□□□ 1.47
HOXA3-205ENST00000522456 EPSTI1Q96J88 318 aa24.23■■□□□ 1.47
HOXA3-205ENST00000522456 DACT1Q9NYF0 836 aa24.23■■□□□ 1.47
HOXA3-205ENST00000522456 MRPL42Q9Y6G3 142 aaKnown RBP24.23■■□□□ 1.47
HOXA3-205ENST00000522456 LRRIQ4A6NIV6 560 aa24.22■■□□□ 1.47
HOXA3-205ENST00000522456 INO80B-WBP1J3KQ70 363 aa24.22■■□□□ 1.47
HOXA3-205ENST00000522456 KARSQ15046 597 aaKnown RBP24.22■■□□□ 1.47
HOXA3-205ENST00000522456 TMEM119Q4V9L6 283 aa24.22■■□□□ 1.47
HOXA3-205ENST00000522456 P2RX5Q93086 422 aa24.22■■□□□ 1.47
HOXA3-205ENST00000522456 ALG13Q9NP73 1137 aaKnown RBP24.22■■□□□ 1.47
HOXA3-205ENST00000522456 PIN4Q9Y237 131 aaKnown RBP24.22■■□□□ 1.47
HOXA3-205ENST00000522456 MORC2Q9Y6X9 1032 aaPredicted RBP24.22■■□□□ 1.47
HOXA3-205ENST00000522456 MYO7AQ13402 2215 aa24.21■■□□□ 1.47
HOXA3-205ENST00000522456 SPTLC2O15270 562 aa24.21■■□□□ 1.47
HOXA3-205ENST00000522456 ERLIN2O94905 339 aa24.21■■□□□ 1.47
HOXA3-205ENST00000522456 PLA2G4BP0C869 781 aa24.21■■□□□ 1.47
HOXA3-205ENST00000522456 HOXD11P31277 338 aaPredicted RBP24.21■■□□□ 1.47
HOXA3-205ENST00000522456 FAM189BP81408 668 aa24.21■■□□□ 1.47
HOXA3-205ENST00000522456 RINT1Q6NUQ1 792 aa24.21■■□□□ 1.47
HOXA3-205ENST00000522456 USP49Q70CQ1 688 aa24.21■■□□□ 1.47
HOXA3-205ENST00000522456 ADHFE1Q8IWW8 467 aa24.21■■□□□ 1.47
HOXA3-205ENST00000522456 SYT2Q8N9I0 419 aaPredicted RBP24.21■■□□□ 1.47
HOXA3-205ENST00000522456 KIFAP3Q92845 792 aa24.21■■□□□ 1.47
HOXA3-205ENST00000522456 CCSER1Q9C0I3 900 aa24.21■■□□□ 1.47
HOXA3-205ENST00000522456 ELAC1Q9H777 363 aaKnown RBP24.21■■□□□ 1.47
HOXA3-205ENST00000522456 TMEM161AQ9NX61 479 aa24.21■■□□□ 1.47
HOXA3-205ENST00000522456 PLAGL2Q9UPG8 496 aa24.21■■□□□ 1.47
HOXA3-205ENST00000522456 KIAA1671Q9BY89 1806 aa24.21■■□□□ 1.47
HOXA3-205ENST00000522456 MYH15Q9Y2K3 1946 aa24.2■■□□□ 1.46
HOXA3-205ENST00000522456 DCXO43602 365 aa24.2■■□□□ 1.46
HOXA3-205ENST00000522456 YEATS4O95619 227 aa24.2■■□□□ 1.46
HOXA3-205ENST00000522456 BRD1O95696 1058 aa24.2■■□□□ 1.46
HOXA3-205ENST00000522456 PLCG1P19174 1290 aa24.2■■□□□ 1.46
HOXA3-205ENST00000522456 TXLNAP40222 546 aa24.2■■□□□ 1.46
HOXA3-205ENST00000522456 DLX2Q07687 328 aaPredicted RBP24.2■■□□□ 1.46
HOXA3-205ENST00000522456 NCBP1Q09161 790 aaKnown RBP24.2■■□□□ 1.46
HOXA3-205ENST00000522456 CLUL1Q15846 466 aa24.2■■□□□ 1.46
HOXA3-205ENST00000522456 PAN2Q504Q3 1202 aaKnown RBP24.2■■□□□ 1.46
HOXA3-205ENST00000522456 ATL3Q6DD88 541 aa24.2■■□□□ 1.46
HOXA3-205ENST00000522456 TWF2Q6IBS0 349 aaKnown RBP24.2■■□□□ 1.46
HOXA3-205ENST00000522456 C1orf186Q6ZWK4 172 aa24.2■■□□□ 1.46
HOXA3-205ENST00000522456 IFNLR1Q8IU57 520 aaPredicted RBP24.2■■□□□ 1.46
HOXA3-205ENST00000522456 IFT74Q96LB3 600 aa24.2■■□□□ 1.46
HOXA3-205ENST00000522456 RUSC1Q9BVN2 902 aa24.2■■□□□ 1.46
HOXA3-205ENST00000522456 NFKBIZQ9BYH8 718 aa24.2■■□□□ 1.46
HOXA3-205ENST00000522456 CCDC39Q9UFE4 941 aa24.2■■□□□ 1.46
HOXA3-205ENST00000522456 CFAP45Q9UL16 551 aa24.2■■□□□ 1.46
HOXA3-205ENST00000522456 C19orf67A6NJJ6 358 aa24.19■■□□□ 1.46
HOXA3-205ENST00000522456 HOXA2O43364 376 aa24.19■■□□□ 1.46
HOXA3-205ENST00000522456 PPP6R2O75170 966 aa24.19■■□□□ 1.46
HOXA3-205ENST00000522456 TBX10O75333 385 aa24.19■■□□□ 1.46
HOXA3-205ENST00000522456 GTF2F1P35269 517 aaKnown RBP eCLIP24.19■■□□□ 1.466e-10■■□□□ 13.4
HOXA3-205ENST00000522456 CAMK1Q14012 370 aa24.19■■□□□ 1.46
HOXA3-205ENST00000522456 DHX8Q14562 1220 aaKnown RBP24.19■■□□□ 1.46
HOXA3-205ENST00000522456 PPP2R5AQ15172 486 aa24.19■■□□□ 1.46
HOXA3-205ENST00000522456 PCBP1Q15365 356 aaKnown RBP eCLIP24.19■■□□□ 1.46
HOXA3-205ENST00000522456 CSPP1Q1MSJ5 1256 aa24.19■■□□□ 1.46
HOXA3-205ENST00000522456 NAALADL2Q58DX5 795 aa24.19■■□□□ 1.46
HOXA3-205ENST00000522456 ZBTB8OSQ8IWT0 167 aa24.19■■□□□ 1.46
HOXA3-205ENST00000522456 RNF169Q8NCN4 708 aa24.19■■□□□ 1.46
HOXA3-205ENST00000522456 DEPTORQ8TB45 409 aa24.19■■□□□ 1.46
HOXA3-205ENST00000522456 BSNDQ8WZ55 320 aa24.19■■□□□ 1.46
HOXA3-205ENST00000522456 IGFLR1Q9H665 355 aa24.19■■□□□ 1.46
HOXA3-205ENST00000522456 AGPAT5Q9NUQ2 364 aa24.19■■□□□ 1.46
HOXA3-205ENST00000522456 ZDHHC9Q9Y397 364 aa24.19■■□□□ 1.46
HOXA3-205ENST00000522456 A0A0U1RQF3 1178 aa24.18■■□□□ 1.46
HOXA3-205ENST00000522456 HIP1RO75146 1068 aa24.18■■□□□ 1.46
HOXA3-205ENST00000522456 ITGB1P05556 798 aa24.18■■□□□ 1.46
HOXA3-205ENST00000522456 NAMPTP43490 491 aa24.18■■□□□ 1.46
HOXA3-205ENST00000522456 SLC12A3P55017 1021 aa24.18■■□□□ 1.46
HOXA3-205ENST00000522456 DNM1Q05193 864 aaKnown RBP24.18■■□□□ 1.46
HOXA3-205ENST00000522456 MBTD1Q05BQ5 628 aa24.18■■□□□ 1.46
HOXA3-205ENST00000522456 RAD51AP2Q09MP3 1159 aa24.18■■□□□ 1.46
HOXA3-205ENST00000522456 SMAD2Q15796 467 aaKnown RBP24.18■■□□□ 1.46
HOXA3-205ENST00000522456 ECHDC2Q86YB7 292 aa24.18■■□□□ 1.46
HOXA3-205ENST00000522456 PPP2R3CQ969Q6 453 aa24.18■■□□□ 1.46
HOXA3-205ENST00000522456 LINC01565O15544 149 aa24.17■■□□□ 1.46
HOXA3-205ENST00000522456 MBTPS2O43462 519 aa24.17■■□□□ 1.46
HOXA3-205ENST00000522456 DNAJB1P25685 340 aa24.17■■□□□ 1.46
HOXA3-205ENST00000522456 GATMP50440 423 aa24.17■■□□□ 1.46
HOXA3-205ENST00000522456 SMAD4Q13485 552 aaKnown RBP24.17■■□□□ 1.46
HOXA3-205ENST00000522456 DRC1Q96MC2 740 aa24.17■■□□□ 1.46
HOXA3-205ENST00000522456 TIPINQ9BVW5 301 aa24.17■■□□□ 1.46
HOXA3-205ENST00000522456 C2orf40Q9H1Z8 148 aa24.17■■□□□ 1.46
HOXA3-205ENST00000522456 C5orf42Q9H799 3197 aa24.16■■□□□ 1.46
HOXA3-205ENST00000522456 TSPAN1O60635 241 aa24.16■■□□□ 1.46
HOXA3-205ENST00000522456 EOMESO95936 686 aa24.16■■□□□ 1.46
HOXA3-205ENST00000522456 FGFR1P11362 822 aa24.16■■□□□ 1.46
HOXA3-205ENST00000522456 SKIP12755 728 aa24.16■■□□□ 1.46
HOXA3-205ENST00000522456 GUCY2CP25092 1073 aa24.16■■□□□ 1.46
HOXA3-205ENST00000522456 AXLP30530 894 aa24.16■■□□□ 1.46
HOXA3-205ENST00000522456 HOXA11P31270 313 aaPredicted RBP24.16■■□□□ 1.46
HOXA3-205ENST00000522456 DDIT3P35638 169 aa24.16■■□□□ 1.46
HOXA3-205ENST00000522456 MCM6Q14566 821 aa24.16■■□□□ 1.46
HOXA3-205ENST00000522456 RRAGBQ5VZM2 374 aa24.16■■□□□ 1.46
HOXA3-205ENST00000522456 KLHL23Q8NBE8 558 aa24.16■■□□□ 1.46
HOXA3-205ENST00000522456 SPPL3Q8TCT6 385 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms