RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 DNAJB4Q9UDY4 337 aa23.03■■□□□ 1.28
SDCBP-209ENST00000522243 USP15Q9Y4E8 981 aaPredicted RBP23.03■■□□□ 1.28
SDCBP-209ENST00000522243 INO80B-WBP1J3KQ70 363 aa23.02■■□□□ 1.28
SDCBP-209ENST00000522243 TSPAN1O60635 241 aa23.02■■□□□ 1.28
SDCBP-209ENST00000522243 GLRA2P23416 452 aa23.02■■□□□ 1.28
SDCBP-209ENST00000522243 NBR1Q14596 966 aa23.02■■□□□ 1.28
SDCBP-209ENST00000522243 TTC38Q5R3I4 469 aa23.02■■□□□ 1.28
SDCBP-209ENST00000522243 MRPL10Q7Z7H8 261 aaKnown RBP23.02■■□□□ 1.28
SDCBP-209ENST00000522243 APOL5Q9BWW9 433 aa23.02■■□□□ 1.28
SDCBP-209ENST00000522243 POLR3FQ9H1D9 316 aaPredicted RBP23.02■■□□□ 1.28
SDCBP-209ENST00000522243 RSAD1Q9HA92 442 aa23.02■■□□□ 1.28
SDCBP-209ENST00000522243 B4GALT3O60512 393 aa23.01■■□□□ 1.27
SDCBP-209ENST00000522243 GALTP07902 379 aa23.01■■□□□ 1.27
SDCBP-209ENST00000522243 RBM25P49756 843 aaKnown RBP23.01■■□□□ 1.27
SDCBP-209ENST00000522243 SMC1AQ14683 1233 aaKnown RBP23.01■■□□□ 1.27
SDCBP-209ENST00000522243 ZNF280BQ86YH2 543 aa23.01■■□□□ 1.27
SDCBP-209ENST00000522243 URGCPQ8TCY9 931 aa23.01■■□□□ 1.27
SDCBP-209ENST00000522243 BCL7CQ8WUZ0 217 aaPredicted RBP23.01■■□□□ 1.27
SDCBP-209ENST00000522243 EIF2AQ9BY44 585 aaKnown RBP23.01■■□□□ 1.27
SDCBP-209ENST00000522243 TUFT1Q9NNX1 390 aa23.01■■□□□ 1.27
SDCBP-209ENST00000522243 GPRC5CQ9NQ84 441 aa23.01■■□□□ 1.27
SDCBP-209ENST00000522243 C2orf71A6NGG8 1288 aa23■■□□□ 1.27
SDCBP-209ENST00000522243 GPR37L1O60883 481 aa23■■□□□ 1.27
SDCBP-209ENST00000522243 DDHD2O94830 711 aa23■■□□□ 1.27
SDCBP-209ENST00000522243 XRCC6P12956 609 aaKnown RBP eCLIP23■■□□□ 1.27
SDCBP-209ENST00000522243 ALADP13716 330 aa23■■□□□ 1.27
SDCBP-209ENST00000522243 SLC11A1P49279 550 aa23■■□□□ 1.27
SDCBP-209ENST00000522243 MBTD1Q05BQ5 628 aa23■■□□□ 1.27
SDCBP-209ENST00000522243 KCNC3Q14003 757 aa23■■□□□ 1.27
SDCBP-209ENST00000522243 POTEGQ6S5H5 508 aa23■■□□□ 1.27
SDCBP-209ENST00000522243 NOSTRINQ8IVI9 506 aa23■■□□□ 1.27
SDCBP-209ENST00000522243 VPS52Q8N1B4 723 aa23■■□□□ 1.27
SDCBP-209ENST00000522243 MRPL43Q8N983 215 aaKnown RBP23■■□□□ 1.27
SDCBP-209ENST00000522243 SMG8Q8ND04 991 aaKnown RBP23■■□□□ 1.27
SDCBP-209ENST00000522243 AUTS2Q8WXX7 1259 aa23■■□□□ 1.27
SDCBP-209ENST00000522243 IGSF21Q96ID5 467 aa23■■□□□ 1.27
SDCBP-209ENST00000522243 POP1Q99575 1024 aaKnown RBP23■■□□□ 1.27
SDCBP-209ENST00000522243 BDP1A6H8Y1 2624 aa22.99■■□□□ 1.27
SDCBP-209ENST00000522243 FSD2A1L4K1 749 aa22.99■■□□□ 1.27
SDCBP-209ENST00000522243 DCXO43602 365 aa22.99■■□□□ 1.27
SDCBP-209ENST00000522243 CXCL14O95715 111 aa22.99■■□□□ 1.27
SDCBP-209ENST00000522243 POMCP01189 267 aa22.99■■□□□ 1.27
SDCBP-209ENST00000522243 ITGA4P13612 1032 aa22.99■■□□□ 1.27
SDCBP-209ENST00000522243 NCLP19338 710 aaKnown RBP22.99■■□□□ 1.27
SDCBP-209ENST00000522243 ANKRD54Q6NXT1 300 aa22.99■■□□□ 1.27
SDCBP-209ENST00000522243 CDR2LQ86X02 465 aaPredicted RBP22.99■■□□□ 1.27
SDCBP-209ENST00000522243 IFNLR1Q8IU57 520 aaPredicted RBP22.99■■□□□ 1.27
SDCBP-209ENST00000522243 ERMNQ8TAM6 284 aa22.99■■□□□ 1.27
SDCBP-209ENST00000522243 RSPH1Q8WYR4 309 aa22.99■■□□□ 1.27
SDCBP-209ENST00000522243 RNF39Q9H2S5 420 aa22.99■■□□□ 1.27
SDCBP-209ENST00000522243 NOL7Q9UMY1 257 aaKnown RBP22.99■■□□□ 1.27
SDCBP-209ENST00000522243 HES2Q9Y543 173 aa22.99■■□□□ 1.27
SDCBP-209ENST00000522243 IPPQ9Y573 584 aa22.99■■□□□ 1.27
SDCBP-209ENST00000522243 SRGAP2BP0DMP2 458 aa22.98■■□□□ 1.27
SDCBP-209ENST00000522243 ARF4P18085 180 aaPredicted RBP22.98■■□□□ 1.27
SDCBP-209ENST00000522243 AXLP30530 894 aa22.98■■□□□ 1.27
SDCBP-209ENST00000522243 POU5F1BQ06416 359 aa22.98■■□□□ 1.27
SDCBP-209ENST00000522243 NCBP1Q09161 790 aaKnown RBP22.98■■□□□ 1.27
SDCBP-209ENST00000522243 ORC2Q13416 577 aaPredicted RBP22.98■■□□□ 1.27
SDCBP-209ENST00000522243 AMHR2Q16671 573 aa22.98■■□□□ 1.27
SDCBP-209ENST00000522243 NOTUMQ6P988 496 aa22.98■■□□□ 1.27
SDCBP-209ENST00000522243 SYCE2Q6PIF2 218 aa22.98■■□□□ 1.27
SDCBP-209ENST00000522243 TMEM184AQ6ZMB5 413 aa22.98■■□□□ 1.27
SDCBP-209ENST00000522243 FAM193BQ96PV7 902 aaPredicted RBP22.98■■□□□ 1.27
SDCBP-209ENST00000522243 NACC1Q96RE7 527 aa22.98■■□□□ 1.27
SDCBP-209ENST00000522243 POLR3CQ9BUI4 534 aaPredicted RBP22.98■■□□□ 1.27
SDCBP-209ENST00000522243 APOL6Q9BWW8 343 aa22.98■■□□□ 1.27
SDCBP-209ENST00000522243 ZBP1Q9H171 429 aa22.98■■□□□ 1.27
SDCBP-209ENST00000522243 HCFC2Q9Y5Z7 792 aa22.98■■□□□ 1.27
SDCBP-209ENST00000522243 CNTNAP2Q9UHC6 1331 aa22.98■■□□□ 1.27
SDCBP-209ENST00000522243 LRRIQ4A6NIV6 560 aa22.97■■□□□ 1.27
SDCBP-209ENST00000522243 B4GALT5O43286 388 aa22.97■■□□□ 1.27
SDCBP-209ENST00000522243 CLASP2O75122 1294 aaKnown RBP22.97■■□□□ 1.27
SDCBP-209ENST00000522243 BMS1Q14692 1282 aaKnown RBP22.97■■□□□ 1.27
SDCBP-209ENST00000522243 RABEP1Q15276 862 aa22.97■■□□□ 1.27
SDCBP-209ENST00000522243 PCBP1Q15365 356 aaKnown RBP eCLIP22.97■■□□□ 1.27
SDCBP-209ENST00000522243 DDX53Q86TM3 631 aaKnown RBP22.97■■□□□ 1.27
SDCBP-209ENST00000522243 RNF135Q8IUD6 432 aa22.97■■□□□ 1.27
SDCBP-209ENST00000522243 CNNM3Q8NE01 707 aa22.97■■□□□ 1.27
SDCBP-209ENST00000522243 CSRNP2Q9H175 543 aa22.97■■□□□ 1.27
SDCBP-209ENST00000522243 S1PR5Q9H228 398 aa22.97■■□□□ 1.27
SDCBP-209ENST00000522243 MUTYHQ9UIF7 546 aa22.97■■□□□ 1.27
SDCBP-209ENST00000522243 DBR1Q9UK59 544 aaKnown RBP22.97■■□□□ 1.27
SDCBP-209ENST00000522243 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.96■■□□□ 1.27
SDCBP-209ENST00000522243 RPA1P27694 616 aa22.96■■□□□ 1.27
SDCBP-209ENST00000522243 C4orf32Q8N8J7 132 aa22.96■■□□□ 1.27
SDCBP-209ENST00000522243 RPGRIP1Q96KN7 1286 aa22.96■■□□□ 1.27
SDCBP-209ENST00000522243 GAD1Q99259 594 aa22.96■■□□□ 1.27
SDCBP-209ENST00000522243 VN1R3Q9BXE9 311 aa22.96■■□□□ 1.27
SDCBP-209ENST00000522243 MIOSQ9NXC5 875 aa22.96■■□□□ 1.27
SDCBP-209ENST00000522243 KANSL3Q9P2N6 904 aa22.96■■□□□ 1.27
SDCBP-209ENST00000522243 CDH22Q9UJ99 828 aa22.96■■□□□ 1.27
SDCBP-209ENST00000522243 FAN1Q9Y2M0 1017 aa22.96■■□□□ 1.27
SDCBP-209ENST00000522243 TDRD15B5MCY1 1934 aaKnown RBP22.96■■□□□ 1.27
SDCBP-209ENST00000522243 ALDH2P05091 517 aa22.95■■□□□ 1.26
SDCBP-209ENST00000522243 CTSAP10619 480 aa22.95■■□□□ 1.26
SDCBP-209ENST00000522243 U2AF2P26368 475 aaKnown RBP eCLIP22.95■■□□□ 1.26
SDCBP-209ENST00000522243 CCT6AP40227 531 aaKnown RBP22.95■■□□□ 1.26
SDCBP-209ENST00000522243 MLH1P40692 756 aa22.95■■□□□ 1.26
SDCBP-209ENST00000522243 TRAPPC10P48553 1259 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms