RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 HSD3B7Q9H2F3 369 aa14.34□□□□□ -0.11
CPNE3-205ENST00000522240 THAP9Q9H5L6 903 aa14.34□□□□□ -0.11
CPNE3-205ENST00000522240 BRCA2P51587 3418 aa14.33□□□□□ -0.12
CPNE3-205ENST00000522240 A0A0U1RQG5 324 aaPredicted RBP14.33□□□□□ -0.12
CPNE3-205ENST00000522240 TREHO43280 583 aa14.33□□□□□ -0.12
CPNE3-205ENST00000522240 TGFB1I1O43294 461 aa14.33□□□□□ -0.12
CPNE3-205ENST00000522240 GPC3P51654 580 aa14.33□□□□□ -0.12
CPNE3-205ENST00000522240 PTENP60484 403 aa14.33□□□□□ -0.12
CPNE3-205ENST00000522240 FKBP3Q00688 224 aaKnown RBP14.33□□□□□ -0.12
CPNE3-205ENST00000522240 KCNA1Q09470 495 aa14.33□□□□□ -0.12
CPNE3-205ENST00000522240 STRN3Q13033 797 aa14.33□□□□□ -0.12
CPNE3-205ENST00000522240 ITGA7Q13683 1181 aa14.33□□□□□ -0.12
CPNE3-205ENST00000522240 MYBPC2Q14324 1141 aa14.33□□□□□ -0.12
CPNE3-205ENST00000522240 SARM1Q6SZW1 724 aa14.33□□□□□ -0.12
CPNE3-205ENST00000522240 LRRC55Q6ZSA7 311 aa14.33□□□□□ -0.12
CPNE3-205ENST00000522240 TAS1R3Q7RTX0 852 aa14.33□□□□□ -0.12
CPNE3-205ENST00000522240 RPAINQ86UA6 219 aa14.33□□□□□ -0.12
CPNE3-205ENST00000522240 FAM114A1Q8IWE2 563 aa14.33□□□□□ -0.12
CPNE3-205ENST00000522240 SYCP3Q8IZU3 236 aa14.33□□□□□ -0.12
CPNE3-205ENST00000522240 NME8Q8N427 588 aa14.33□□□□□ -0.12
CPNE3-205ENST00000522240 SLC43A3Q8NBI5 491 aa14.33□□□□□ -0.12
CPNE3-205ENST00000522240 NLRP4Q96MN2 994 aa14.33□□□□□ -0.12
CPNE3-205ENST00000522240 CRISPLD2Q9H0B8 497 aa14.33□□□□□ -0.12
CPNE3-205ENST00000522240 AGPAT3Q9NRZ7 376 aa14.33□□□□□ -0.12
CPNE3-205ENST00000522240 FANCLQ9NW38 375 aa14.33□□□□□ -0.12
CPNE3-205ENST00000522240 GRIN2DO15399 1336 aa14.33□□□□□ -0.12
CPNE3-205ENST00000522240 K7ERI5 159 aa14.32□□□□□ -0.12
CPNE3-205ENST00000522240 VTNP04004 478 aa14.32□□□□□ -0.12
CPNE3-205ENST00000522240 GJB1P08034 283 aa14.32□□□□□ -0.12
CPNE3-205ENST00000522240 RPL13P26373 211 aaKnown RBP14.32□□□□□ -0.12
CPNE3-205ENST00000522240 FAM47CQ5HY64 1035 aa14.32□□□□□ -0.12
CPNE3-205ENST00000522240 GDF6Q6KF10 455 aaPredicted RBP14.32□□□□□ -0.12
CPNE3-205ENST00000522240 RUFY4Q6ZNE9 571 aa14.32□□□□□ -0.12
CPNE3-205ENST00000522240 SERINC5Q86VE9 423 aa14.32□□□□□ -0.12
CPNE3-205ENST00000522240 SLC9A9Q8IVB4 645 aa14.32□□□□□ -0.12
CPNE3-205ENST00000522240 KSR1Q8IVT5 923 aa14.32□□□□□ -0.12
CPNE3-205ENST00000522240 STARD7Q9NQZ5 370 aa14.32□□□□□ -0.12
CPNE3-205ENST00000522240 SAMSN1Q9NSI8 373 aaKnown RBP14.32□□□□□ -0.12
CPNE3-205ENST00000522240 PRMT7Q9NVM4 692 aaPredicted RBP14.32□□□□□ -0.12
CPNE3-205ENST00000522240 HNRNPDLO14979 420 aaKnown RBP14.31□□□□□ -0.12
CPNE3-205ENST00000522240 SLC16A3O15427 465 aaKnown RBP14.31□□□□□ -0.12
CPNE3-205ENST00000522240 GNA14O95837 355 aa14.31□□□□□ -0.12
CPNE3-205ENST00000522240 NR3C1P04150 777 aa14.31□□□□□ -0.12
CPNE3-205ENST00000522240 PRKCBP05771 671 aa14.31□□□□□ -0.12
CPNE3-205ENST00000522240 SRGAP2CP0DJJ0 459 aa14.31□□□□□ -0.12
CPNE3-205ENST00000522240 NR2F2P24468 414 aa14.31□□□□□ -0.12
CPNE3-205ENST00000522240 EEF1GP26641 437 aaKnown RBP14.31□□□□□ -0.12
CPNE3-205ENST00000522240 ZNF200P98182 395 aaPredicted RBP14.31□□□□□ -0.12
CPNE3-205ENST00000522240 MBTD1Q05BQ5 628 aa14.31□□□□□ -0.12
CPNE3-205ENST00000522240 PCBP1Q15365 356 aaKnown RBP eCLIP14.31□□□□□ -0.12
CPNE3-205ENST00000522240 MAPK6Q16659 721 aa14.31□□□□□ -0.12
CPNE3-205ENST00000522240 FAM187BQ17R55 369 aa14.31□□□□□ -0.12
CPNE3-205ENST00000522240 ZPBP2Q6X784 338 aa14.31□□□□□ -0.12
CPNE3-205ENST00000522240 SRGAP1Q7Z6B7 1085 aa14.31□□□□□ -0.12
CPNE3-205ENST00000522240 RSPH3Q86UC2 560 aa14.31□□□□□ -0.12
CPNE3-205ENST00000522240 PRIMPOLQ96LW4 560 aa14.31□□□□□ -0.12
CPNE3-205ENST00000522240 SRRTQ9BXP5 876 aaKnown RBP14.31□□□□□ -0.12
CPNE3-205ENST00000522240 FAM49AQ9H0Q0 323 aaPredicted RBP14.31□□□□□ -0.12
CPNE3-205ENST00000522240 IFT122Q9HBG6 1241 aa14.31□□□□□ -0.12
CPNE3-205ENST00000522240 TRIP12Q14669 1992 aaPredicted RBP14.31□□□□□ -0.12
CPNE3-205ENST00000522240 A0A087WZ62 844 aa14.3□□□□□ -0.12
CPNE3-205ENST00000522240 KIAA0391O15091 583 aaKnown RBP14.3□□□□□ -0.12
CPNE3-205ENST00000522240 CETN3O15182 167 aa14.3□□□□□ -0.12
CPNE3-205ENST00000522240 CAND2O75155 1236 aa14.3□□□□□ -0.12
CPNE3-205ENST00000522240 GPR32O75388 356 aa14.3□□□□□ -0.12
CPNE3-205ENST00000522240 SGPL1O95470 568 aa14.3□□□□□ -0.12
CPNE3-205ENST00000522240 GARTP22102 1010 aa14.3□□□□□ -0.12
CPNE3-205ENST00000522240 MARSP56192 900 aaKnown RBP14.3□□□□□ -0.12
CPNE3-205ENST00000522240 NLRP11P59045 1033 aaKnown RBP14.3□□□□□ -0.12
CPNE3-205ENST00000522240 PTK7Q13308 1070 aa14.3□□□□□ -0.12
CPNE3-205ENST00000522240 HSP90AA2PQ14568 343 aaPredicted RBP14.3□□□□□ -0.12
CPNE3-205ENST00000522240 HABP4Q5JVS0 413 aaKnown RBP14.3□□□□□ -0.12
CPNE3-205ENST00000522240 FILIP1Q7Z7B0 1213 aa14.3□□□□□ -0.12
CPNE3-205ENST00000522240 IRF2BP1Q8IU81 584 aa14.3□□□□□ -0.12
CPNE3-205ENST00000522240 ANKLE1Q8NAG6 615 aa14.3□□□□□ -0.12
CPNE3-205ENST00000522240 ANKRD20A12PQ8NF67 263 aa14.3□□□□□ -0.12
CPNE3-205ENST00000522240 U2AF1L4Q8WU68 220 aaKnown RBP14.3□□□□□ -0.12
CPNE3-205ENST00000522240 PPP1R13LQ8WUF5 828 aa14.3□□□□□ -0.12
CPNE3-205ENST00000522240 DNAJB3Q8WWF6 145 aa14.3□□□□□ -0.12
CPNE3-205ENST00000522240 NLRP7Q8WX94 980 aa14.3□□□□□ -0.12
CPNE3-205ENST00000522240 VTI1AQ96AJ9 217 aa14.3□□□□□ -0.12
CPNE3-205ENST00000522240 BICD1Q96G01 975 aa14.3□□□□□ -0.12
CPNE3-205ENST00000522240 CNOT6LQ96LI5 555 aaKnown RBP14.3□□□□□ -0.12
CPNE3-205ENST00000522240 SCLT1Q96NL6 688 aa14.3□□□□□ -0.12
CPNE3-205ENST00000522240 FDXACB1Q9BRP7 624 aaPredicted RBP14.3□□□□□ -0.12
CPNE3-205ENST00000522240 MKNK1Q9BUB5 465 aa14.3□□□□□ -0.12
CPNE3-205ENST00000522240 MRPL4Q9BYD3 311 aaKnown RBP14.3□□□□□ -0.12
CPNE3-205ENST00000522240 GCOM2Q9BZD3 368 aaPredicted RBP14.3□□□□□ -0.12
CPNE3-205ENST00000522240 ADAMTS10Q9H324 1103 aa14.3□□□□□ -0.12
CPNE3-205ENST00000522240 FZD8Q9H461 694 aa14.3□□□□□ -0.12
CPNE3-205ENST00000522240 DMAC2Q9NW81 257 aa14.3□□□□□ -0.12
CPNE3-205ENST00000522240 MAGEC2Q9UBF1 373 aaPredicted RBP14.3□□□□□ -0.12
CPNE3-205ENST00000522240 STYXL1Q9Y6J8 313 aa14.3□□□□□ -0.12
CPNE3-205ENST00000522240 CNTNAP2Q9UHC6 1331 aa14.3□□□□□ -0.12
CPNE3-205ENST00000522240 KCNJ18B7U540 433 aa14.29□□□□□ -0.12
CPNE3-205ENST00000522240 INO80B-WBP1J3KQ70 363 aa14.29□□□□□ -0.12
CPNE3-205ENST00000522240 ARVCFO00192 962 aa14.29□□□□□ -0.12
CPNE3-205ENST00000522240 ACKR2O00590 384 aa14.29□□□□□ -0.12
CPNE3-205ENST00000522240 ATP1A3P13637 1013 aa14.29□□□□□ -0.12
CPNE3-205ENST00000522240 TIE1P35590 1138 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms