RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 PRKCBP05771 671 aa23.42■■□□□ 1.34
R3HCC1-208ENST00000522012 LIG4P49917 911 aa23.42■■□□□ 1.34
R3HCC1-208ENST00000522012 CYP2J2P51589 502 aa23.42■■□□□ 1.34
R3HCC1-208ENST00000522012 SNRPFP62306 86 aaKnown RBP23.42■■□□□ 1.34
R3HCC1-208ENST00000522012 PTPN11Q06124 597 aaPredicted RBP23.42■■□□□ 1.34
R3HCC1-208ENST00000522012 SPAG1Q07617 926 aa23.42■■□□□ 1.34
R3HCC1-208ENST00000522012 TCP11X2Q5H9J9 407 aa23.42■■□□□ 1.34
R3HCC1-208ENST00000522012 FILIP1Q7Z7B0 1213 aa23.42■■□□□ 1.34
R3HCC1-208ENST00000522012 ZNF410Q86VK4 478 aa23.42■■□□□ 1.34
R3HCC1-208ENST00000522012 NME8Q8N427 588 aa23.42■■□□□ 1.34
R3HCC1-208ENST00000522012 ANKRD20A12PQ8NF67 263 aa23.42■■□□□ 1.34
R3HCC1-208ENST00000522012 ADAMTS10Q9H324 1103 aa23.42■■□□□ 1.34
R3HCC1-208ENST00000522012 HTTP42858 3142 aa23.41■■□□□ 1.34
R3HCC1-208ENST00000522012 A0A0U1RQG5 324 aaPredicted RBP23.41■■□□□ 1.34
R3HCC1-208ENST00000522012 GPR32O75388 356 aa23.41■■□□□ 1.34
R3HCC1-208ENST00000522012 MBTD1Q05BQ5 628 aa23.41■■□□□ 1.34
R3HCC1-208ENST00000522012 NFIL3Q16649 462 aa23.41■■□□□ 1.34
R3HCC1-208ENST00000522012 CEP135Q66GS9 1140 aa23.41■■□□□ 1.34
R3HCC1-208ENST00000522012 ARMCX5Q6P1M9 558 aa23.41■■□□□ 1.34
R3HCC1-208ENST00000522012 SARM1Q6SZW1 724 aa23.41■■□□□ 1.34
R3HCC1-208ENST00000522012 ZC3H3Q8IXZ2 948 aaKnown RBP23.41■■□□□ 1.34
R3HCC1-208ENST00000522012 U2AF1L4Q8WU68 220 aaKnown RBP23.41■■□□□ 1.34
R3HCC1-208ENST00000522012 CNOT6LQ96LI5 555 aaKnown RBP23.41■■□□□ 1.34
R3HCC1-208ENST00000522012 TARS2Q9BW92 718 aaKnown RBP23.41■■□□□ 1.34
R3HCC1-208ENST00000522012 PCIF1Q9H4Z3 704 aa23.41■■□□□ 1.34
R3HCC1-208ENST00000522012 MINDY3Q9H8M7 445 aa23.41■■□□□ 1.34
R3HCC1-208ENST00000522012 NOD1Q9Y239 953 aa23.41■■□□□ 1.34
R3HCC1-208ENST00000522012 CSDE1O75534 798 aaKnown RBP23.4■■□□□ 1.34
R3HCC1-208ENST00000522012 SGPL1O95470 568 aa23.4■■□□□ 1.34
R3HCC1-208ENST00000522012 ADCY5O95622 1261 aa23.4■■□□□ 1.34
R3HCC1-208ENST00000522012 EEF1GP26641 437 aaKnown RBP23.4■■□□□ 1.34
R3HCC1-208ENST00000522012 RSPH3Q86UC2 560 aa23.4■■□□□ 1.34
R3HCC1-208ENST00000522012 SERINC5Q86VE9 423 aa23.4■■□□□ 1.34
R3HCC1-208ENST00000522012 IFNLR1Q8IU57 520 aaPredicted RBP23.4■■□□□ 1.34
R3HCC1-208ENST00000522012 CBWD1Q9BRT8 395 aa23.4■■□□□ 1.34
R3HCC1-208ENST00000522012 MRPL4Q9BYD3 311 aaKnown RBP23.4■■□□□ 1.34
R3HCC1-208ENST00000522012 GCOM2Q9BZD3 368 aaPredicted RBP23.4■■□□□ 1.34
R3HCC1-208ENST00000522012 FZD8Q9H461 694 aa23.4■■□□□ 1.34
R3HCC1-208ENST00000522012 TRMT13Q9NUP7 481 aaKnown RBP23.4■■□□□ 1.34
R3HCC1-208ENST00000522012 IFNKQ9P0W0 207 aa23.4■■□□□ 1.34
R3HCC1-208ENST00000522012 CCDC40Q4G0X9 1142 aa23.39■■□□□ 1.34
R3HCC1-208ENST00000522012 SLC39A4Q6P5W5 647 aa23.39■■□□□ 1.34
R3HCC1-208ENST00000522012 CRISPLD2Q9H0B8 497 aa23.39■■□□□ 1.34
R3HCC1-208ENST00000522012 CDHR5Q9HBB8 845 aa23.39■■□□□ 1.34
R3HCC1-208ENST00000522012 DMAC2Q9NW81 257 aa23.39■■□□□ 1.34
R3HCC1-208ENST00000522012 LIMA1Q9UHB6 759 aaKnown RBP23.39■■□□□ 1.34
R3HCC1-208ENST00000522012 ARVCFO00192 962 aa23.38■■□□□ 1.33
R3HCC1-208ENST00000522012 EXOC3O60645 756 aa23.38■■□□□ 1.33
R3HCC1-208ENST00000522012 GNA14O95837 355 aa23.38■■□□□ 1.33
R3HCC1-208ENST00000522012 PIGRP01833 764 aa23.38■■□□□ 1.33
R3HCC1-208ENST00000522012 EDN1P05305 212 aa23.38■■□□□ 1.33
R3HCC1-208ENST00000522012 MTIF2P46199 727 aaKnown RBP23.38■■□□□ 1.33
R3HCC1-208ENST00000522012 UBASH3AP57075 661 aa23.38■■□□□ 1.33
R3HCC1-208ENST00000522012 PRPF4BQ13523 1007 aaKnown RBP23.38■■□□□ 1.33
R3HCC1-208ENST00000522012 MYBPC2Q14324 1141 aa23.38■■□□□ 1.33
R3HCC1-208ENST00000522012 KRT31Q15323 416 aa23.38■■□□□ 1.33
R3HCC1-208ENST00000522012 TMEM132AQ24JP5 1023 aa23.38■■□□□ 1.33
R3HCC1-208ENST00000522012 SRGAP1Q7Z6B7 1085 aa23.38■■□□□ 1.33
R3HCC1-208ENST00000522012 SLC9A9Q8IVB4 645 aa23.38■■□□□ 1.33
R3HCC1-208ENST00000522012 C12orf56Q8IXR9 622 aa23.38■■□□□ 1.33
R3HCC1-208ENST00000522012 SLC43A3Q8NBI5 491 aa23.38■■□□□ 1.33
R3HCC1-208ENST00000522012 POMGNT1Q8WZA1 660 aa23.38■■□□□ 1.33
R3HCC1-208ENST00000522012 OSMRQ99650 979 aa23.38■■□□□ 1.33
R3HCC1-208ENST00000522012 PRMT7Q9NVM4 692 aaPredicted RBP23.38■■□□□ 1.33
R3HCC1-208ENST00000522012 TAB2Q9NYJ8 693 aa23.38■■□□□ 1.33
R3HCC1-208ENST00000522012 MYH11P35749 1972 aa23.38■■□□□ 1.33
R3HCC1-208ENST00000522012 SCN10AQ9Y5Y9 1956 aa23.38■■□□□ 1.33
R3HCC1-208ENST00000522012 ACKR2O00590 384 aa23.38■■□□□ 1.33
R3HCC1-208ENST00000522012 IQCF3P0C7M6 154 aa23.38■■□□□ 1.33
R3HCC1-208ENST00000522012 ADSSP30520 456 aa23.38■■□□□ 1.33
R3HCC1-208ENST00000522012 MATR3P43243 847 aaKnown RBP eCLIP23.38■■□□□ 1.33
R3HCC1-208ENST00000522012 CASP4P49662 377 aa23.38■■□□□ 1.33
R3HCC1-208ENST00000522012 ZNF75DP51815 510 aa23.38■■□□□ 1.33
R3HCC1-208ENST00000522012 ZNF710Q8N1W2 664 aa23.38■■□□□ 1.33
R3HCC1-208ENST00000522012 WNT8BQ93098 351 aa23.38■■□□□ 1.33
R3HCC1-208ENST00000522012 CTAGE1Q96RT6 745 aa23.38■■□□□ 1.33
R3HCC1-208ENST00000522012 HSPBP1Q9NZL4 362 aa23.38■■□□□ 1.33
R3HCC1-208ENST00000522012 FRMD4BQ9Y2L6 1034 aa23.38■■□□□ 1.33
R3HCC1-208ENST00000522012 TTLL13PA6NNM8 815 aa23.37■■□□□ 1.33
R3HCC1-208ENST00000522012 M0QZ92 97 aa23.37■■□□□ 1.33
R3HCC1-208ENST00000522012 B4GALT5O43286 388 aa23.37■■□□□ 1.33
R3HCC1-208ENST00000522012 AKAP3O75969 853 aa23.37■■□□□ 1.33
R3HCC1-208ENST00000522012 EPB41P11171 864 aaKnown RBP23.37■■□□□ 1.33
R3HCC1-208ENST00000522012 PSMC2P35998 433 aaKnown RBP23.37■■□□□ 1.33
R3HCC1-208ENST00000522012 MRPS6P82932 125 aaKnown RBP23.37■■□□□ 1.33
R3HCC1-208ENST00000522012 PTK7Q13308 1070 aa23.37■■□□□ 1.33
R3HCC1-208ENST00000522012 ZPBP2Q6X784 338 aa23.37■■□□□ 1.33
R3HCC1-208ENST00000522012 NAP1L5Q96NT1 182 aaPredicted RBP23.37■■□□□ 1.33
R3HCC1-208ENST00000522012 ACO2Q99798 780 aaKnown RBP23.37■■□□□ 1.33
R3HCC1-208ENST00000522012 XPO4Q9C0E2 1151 aaKnown RBP23.37■■□□□ 1.33
R3HCC1-208ENST00000522012 SENP6Q9GZR1 1112 aaPredicted RBP23.37■■□□□ 1.33
R3HCC1-208ENST00000522012 TRPV6Q9H1D0 765 aa23.37■■□□□ 1.33
R3HCC1-208ENST00000522012 VPS16Q9H269 839 aa23.37■■□□□ 1.33
R3HCC1-208ENST00000522012 SLC16A3O15427 465 aaKnown RBP23.36■■□□□ 1.33
R3HCC1-208ENST00000522012 CBFA2T2O43439 604 aa23.36■■□□□ 1.33
R3HCC1-208ENST00000522012 PRKCSHP14314 528 aaPredicted RBP23.36■■□□□ 1.33
R3HCC1-208ENST00000522012 DARSP14868 501 aaKnown RBP23.36■■□□□ 1.33
R3HCC1-208ENST00000522012 GARTP22102 1010 aa23.36■■□□□ 1.33
R3HCC1-208ENST00000522012 CRYBB1P53674 252 aaPredicted RBP23.36■■□□□ 1.33
R3HCC1-208ENST00000522012 FAM187BQ17R55 369 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms