RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 LMBR1Q8WVP7 490 aa9.3□□□□□ -0.92
VPS13B-210ENST00000521932 CALML4Q96GE6 196 aa9.3□□□□□ -0.92
VPS13B-210ENST00000521932 HTATIP2Q9BUP3 242 aa9.3□□□□□ -0.92
VPS13B-210ENST00000521932 TIMMDC1Q9NPL8 285 aa9.3□□□□□ -0.92
VPS13B-210ENST00000521932 PDLIM7Q9NR12 457 aa9.3□□□□□ -0.92
VPS13B-210ENST00000521932 CYP26B1Q9NR63 512 aa9.3□□□□□ -0.92
VPS13B-210ENST00000521932 TRMT13Q9NUP7 481 aaKnown RBP9.3□□□□□ -0.92
VPS13B-210ENST00000521932 DDX19AQ9NUU7 478 aaKnown RBP9.3□□□□□ -0.92
VPS13B-210ENST00000521932 CCDC39Q9UFE4 941 aa9.3□□□□□ -0.92
VPS13B-210ENST00000521932 KIAA1024Q9UPX6 916 aa9.3□□□□□ -0.92
VPS13B-210ENST00000521932 DNM3Q9UQ16 869 aa9.3□□□□□ -0.92
VPS13B-210ENST00000521932 USTQ9Y2C2 406 aa9.3□□□□□ -0.92
VPS13B-210ENST00000521932 SMIM35A0A1B0GVV1 85 aa9.29□□□□□ -0.92
VPS13B-210ENST00000521932 TMEM150BA6NC51 233 aa9.29□□□□□ -0.92
VPS13B-210ENST00000521932 DCDC2CA8MYV0 355 aa9.29□□□□□ -0.92
VPS13B-210ENST00000521932 E9PMD0 336 aa9.29□□□□□ -0.92
VPS13B-210ENST00000521932 TLR3O15455 904 aaKnown RBP9.29□□□□□ -0.92
VPS13B-210ENST00000521932 MAGEB2O15479 319 aa9.29□□□□□ -0.92
VPS13B-210ENST00000521932 TREHO43280 583 aa9.29□□□□□ -0.92
VPS13B-210ENST00000521932 ATP9BO43861 1147 aa9.29□□□□□ -0.92
VPS13B-210ENST00000521932 MAFO75444 373 aaPredicted RBP9.29□□□□□ -0.92
VPS13B-210ENST00000521932 C22orf31O95567 290 aa9.29□□□□□ -0.92
VPS13B-210ENST00000521932 EYA4O95677 639 aa9.29□□□□□ -0.92
VPS13B-210ENST00000521932 TXLNAP40222 546 aa9.29□□□□□ -0.92
VPS13B-210ENST00000521932 NPEPPSP55786 919 aa9.29□□□□□ -0.92
VPS13B-210ENST00000521932 CHMP4BP1P59074 171 aa9.29□□□□□ -0.92
VPS13B-210ENST00000521932 ZNF200P98182 395 aaPredicted RBP9.29□□□□□ -0.92
VPS13B-210ENST00000521932 TLE2Q04725 743 aa9.29□□□□□ -0.92
VPS13B-210ENST00000521932 RBL2Q08999 1139 aa9.29□□□□□ -0.92
VPS13B-210ENST00000521932 PTK7Q13308 1070 aa9.29□□□□□ -0.92
VPS13B-210ENST00000521932 KARSQ15046 597 aaKnown RBP9.29□□□□□ -0.92
VPS13B-210ENST00000521932 MAP7D1Q3KQU3 841 aa9.29□□□□□ -0.92
VPS13B-210ENST00000521932 C4orf17Q53FE4 359 aa9.29□□□□□ -0.92
VPS13B-210ENST00000521932 FAM47CQ5HY64 1035 aa9.29□□□□□ -0.92
VPS13B-210ENST00000521932 TAF2Q6P1X5 1199 aa9.29□□□□□ -0.92
VPS13B-210ENST00000521932 TRMT1LQ7Z2T5 733 aaKnown RBP9.29□□□□□ -0.92
VPS13B-210ENST00000521932 KCNK18Q7Z418 384 aa9.29□□□□□ -0.92
VPS13B-210ENST00000521932 SERINC5Q86VE9 423 aa9.29□□□□□ -0.92
VPS13B-210ENST00000521932 SYT2Q8N9I0 419 aaPredicted RBP9.29□□□□□ -0.92
VPS13B-210ENST00000521932 PPP1R13LQ8WUF5 828 aa9.29□□□□□ -0.92
VPS13B-210ENST00000521932 CDK5RAP3Q96JB5 506 aa9.29□□□□□ -0.92
VPS13B-210ENST00000521932 CEP170P1Q96L14 293 aa9.29□□□□□ -0.92
VPS13B-210ENST00000521932 TRPV6Q9H1D0 765 aa9.29□□□□□ -0.92
VPS13B-210ENST00000521932 DHX33Q9H6R0 707 aaKnown RBP9.29□□□□□ -0.92
VPS13B-210ENST00000521932 TUBE1Q9UJT0 475 aa9.29□□□□□ -0.92
VPS13B-210ENST00000521932 HPSEQ9Y251 543 aa9.29□□□□□ -0.92
VPS13B-210ENST00000521932 PCDHA2Q9Y5H9 948 aa9.29□□□□□ -0.92
VPS13B-210ENST00000521932 TCHHQ07283 1943 aa9.29□□□□□ -0.92
VPS13B-210ENST00000521932 WDR81Q562E7 1941 aa9.29□□□□□ -0.92
VPS13B-210ENST00000521932 MYH9P35579 1960 aaKnown RBP9.28□□□□□ -0.92
VPS13B-210ENST00000521932 A0A087WWV3 80 aa9.28□□□□□ -0.92
VPS13B-210ENST00000521932 A0A087X0B3 334 aa9.28□□□□□ -0.92
VPS13B-210ENST00000521932 PQBP1O60828 265 aaKnown RBP9.28□□□□□ -0.92
VPS13B-210ENST00000521932 RPLP2P05387 115 aaKnown RBP9.28□□□□□ -0.92
VPS13B-210ENST00000521932 CLTBP09497 229 aa9.28□□□□□ -0.92
VPS13B-210ENST00000521932 PLCG1P19174 1290 aa9.28□□□□□ -0.92
VPS13B-210ENST00000521932 SLC12A3P55017 1021 aa9.28□□□□□ -0.92
VPS13B-210ENST00000521932 TBC1D8BQ0IIM8 1120 aa9.28□□□□□ -0.92
VPS13B-210ENST00000521932 MTERF2Q49AM1 385 aa9.28□□□□□ -0.92
VPS13B-210ENST00000521932 NAALADL2Q58DX5 795 aa9.28□□□□□ -0.92
VPS13B-210ENST00000521932 XKR9Q5GH70 373 aa9.28□□□□□ -0.92
VPS13B-210ENST00000521932 RRAGBQ5VZM2 374 aa9.28□□□□□ -0.92
VPS13B-210ENST00000521932 PLA2G4FQ68DD2 849 aa9.28□□□□□ -0.92
VPS13B-210ENST00000521932 CCDC73Q6ZRK6 1079 aa9.28□□□□□ -0.92
VPS13B-210ENST00000521932 NME8Q8N427 588 aa9.28□□□□□ -0.92
VPS13B-210ENST00000521932 LINC01465Q8N7H1 131 aa9.28□□□□□ -0.92
VPS13B-210ENST00000521932 LRRC15Q8TF66 581 aa9.28□□□□□ -0.92
VPS13B-210ENST00000521932 TRAPPC12Q8WVT3 735 aa9.28□□□□□ -0.92
VPS13B-210ENST00000521932 SLC7A3Q8WY07 619 aa9.28□□□□□ -0.92
VPS13B-210ENST00000521932 GTPBP3Q969Y2 492 aaKnown RBP9.28□□□□□ -0.92
VPS13B-210ENST00000521932 JPH2Q9BR39 696 aaPredicted RBP9.28□□□□□ -0.92
VPS13B-210ENST00000521932 SH2D3AQ9BRG2 576 aa9.28□□□□□ -0.92
VPS13B-210ENST00000521932 PYM1Q9BRP8 204 aaKnown RBP9.28□□□□□ -0.92
VPS13B-210ENST00000521932 BHMT2Q9H2M3 363 aa9.28□□□□□ -0.92
VPS13B-210ENST00000521932 BLOC1S4Q9NUP1 217 aa9.28□□□□□ -0.92
VPS13B-210ENST00000521932 FAM13BQ9NYF5 915 aa9.28□□□□□ -0.92
VPS13B-210ENST00000521932 KCND2Q9NZV8 630 aa9.28□□□□□ -0.92
VPS13B-210ENST00000521932 ATP11BQ9Y2G3 1177 aa9.28□□□□□ -0.92
VPS13B-210ENST00000521932 GAS2O43903 313 aaKnown RBP9.27□□□□□ -0.93
VPS13B-210ENST00000521932 CAND2O75155 1236 aa9.27□□□□□ -0.93
VPS13B-210ENST00000521932 PLA2G4BP0C869 781 aa9.27□□□□□ -0.93
VPS13B-210ENST00000521932 CYP2C9P11712 490 aa9.27□□□□□ -0.93
VPS13B-210ENST00000521932 TMOD1P28289 359 aa9.27□□□□□ -0.93
VPS13B-210ENST00000521932 GDF10P55107 478 aa9.27□□□□□ -0.93
VPS13B-210ENST00000521932 IGBP1P78318 339 aa9.27□□□□□ -0.93
VPS13B-210ENST00000521932 ZRSR1Q15695 479 aaKnown RBP9.27□□□□□ -0.93
VPS13B-210ENST00000521932 TRIM71Q2Q1W2 868 aaKnown RBP9.27□□□□□ -0.93
VPS13B-210ENST00000521932 RINT1Q6NUQ1 792 aa9.27□□□□□ -0.93
VPS13B-210ENST00000521932 EFCAB12Q6NXP0 572 aa9.27□□□□□ -0.93
VPS13B-210ENST00000521932 RUFY4Q6ZNE9 571 aa9.27□□□□□ -0.93
VPS13B-210ENST00000521932 C1orf186Q6ZWK4 172 aa9.27□□□□□ -0.93
VPS13B-210ENST00000521932 KIAA0319LQ8IZA0 1049 aa9.27□□□□□ -0.93
VPS13B-210ENST00000521932 IQUBQ8NA54 791 aa9.27□□□□□ -0.93
VPS13B-210ENST00000521932 CAGE1Q8TC20 777 aa9.27□□□□□ -0.93
VPS13B-210ENST00000521932 LARP4BQ92615 738 aaKnown RBP9.27□□□□□ -0.93
VPS13B-210ENST00000521932 DHX38Q92620 1227 aaKnown RBP9.27□□□□□ -0.93
VPS13B-210ENST00000521932 RAD54LQ92698 747 aa9.27□□□□□ -0.93
VPS13B-210ENST00000521932 ZBTB10Q96DT7 871 aa9.27□□□□□ -0.93
VPS13B-210ENST00000521932 PLIN2Q99541 437 aa9.27□□□□□ -0.93
VPS13B-210ENST00000521932 PANK2Q9BZ23 570 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms