RNA–Protein interactions for RNA: ENST00000521477.5

DENND3-216, Transcript of DENN domain containing 3, humanhuman

TSL 3

Gene DENND3, Length 381 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-216ENST00000521477 KBTBD4Q9NVX7 518 aa13.1□□□□□ -0.31
DENND3-216ENST00000521477 KCNH3Q9ULD8 1083 aa13.1□□□□□ -0.31
DENND3-216ENST00000521477 LAMA2P24043 3122 aaKnown RBP13.1□□□□□ -0.31
DENND3-216ENST00000521477 RALGAPA2Q2PPJ7 1873 aa13.1□□□□□ -0.31
DENND3-216ENST00000521477 GBF1Q92538 1859 aa13.1□□□□□ -0.31
DENND3-216ENST00000521477 TCHHQ07283 1943 aa13.09□□□□□ -0.31
DENND3-216ENST00000521477 A0A087WWV3 80 aa13.09□□□□□ -0.31
DENND3-216ENST00000521477 A0A1B0GUA9 196 aa13.09□□□□□ -0.31
DENND3-216ENST00000521477 GOLGA6L4A6NEF3 574 aa13.09□□□□□ -0.31
DENND3-216ENST00000521477 K7ERI5 159 aa13.09□□□□□ -0.31
DENND3-216ENST00000521477 MGEA5O60502 916 aa13.09□□□□□ -0.31
DENND3-216ENST00000521477 HOXA11P31270 313 aaPredicted RBP13.09□□□□□ -0.31
DENND3-216ENST00000521477 NCKAP1LP55160 1127 aa13.09□□□□□ -0.31
DENND3-216ENST00000521477 PEX3P56589 373 aa13.09□□□□□ -0.31
DENND3-216ENST00000521477 STRN3Q13033 797 aa13.09□□□□□ -0.31
DENND3-216ENST00000521477 PRPF4BQ13523 1007 aaKnown RBP13.09□□□□□ -0.31
DENND3-216ENST00000521477 GIT2Q14161 759 aa13.09□□□□□ -0.31
DENND3-216ENST00000521477 PPP2R2DQ66LE6 453 aa13.09□□□□□ -0.31
DENND3-216ENST00000521477 SLC27A1Q6PCB7 646 aa13.09□□□□□ -0.31
DENND3-216ENST00000521477 STXBP4Q6ZWJ1 553 aa13.09□□□□□ -0.31
DENND3-216ENST00000521477 ABI1Q8IZP0 508 aa13.09□□□□□ -0.31
DENND3-216ENST00000521477 BSNDQ8WZ55 320 aa13.09□□□□□ -0.31
DENND3-216ENST00000521477 MRPS27Q92552 414 aaKnown RBP13.09□□□□□ -0.31
DENND3-216ENST00000521477 MRPL4Q9BYD3 311 aaKnown RBP13.09□□□□□ -0.31
DENND3-216ENST00000521477 TMEM117Q9H0C3 514 aa13.09□□□□□ -0.31
DENND3-216ENST00000521477 MINDY3Q9H8M7 445 aa13.09□□□□□ -0.31
DENND3-216ENST00000521477 OLFML3Q9NRN5 406 aa13.09□□□□□ -0.31
DENND3-216ENST00000521477 FAM105AQ9NUU6 356 aa13.09□□□□□ -0.31
DENND3-216ENST00000521477 PCDH10Q9P2E7 1040 aa13.09□□□□□ -0.31
DENND3-216ENST00000521477 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.09□□□□□ -0.31
DENND3-216ENST00000521477 FRMD3A2A2Y4 597 aa13.08□□□□□ -0.32
DENND3-216ENST00000521477 CCDC169A6NNP5 214 aa13.08□□□□□ -0.32
DENND3-216ENST00000521477 SOX1O00570 391 aaPredicted RBP13.08□□□□□ -0.32
DENND3-216ENST00000521477 RB1P06400 928 aa13.08□□□□□ -0.32
DENND3-216ENST00000521477 CA3P07451 260 aa13.08□□□□□ -0.32
DENND3-216ENST00000521477 SLFN14P0C7P3 912 aa13.08□□□□□ -0.32
DENND3-216ENST00000521477 ARF4P18085 180 aaPredicted RBP13.08□□□□□ -0.32
DENND3-216ENST00000521477 KYAT1Q16773 422 aa13.08□□□□□ -0.32
DENND3-216ENST00000521477 KANK3Q6NY19 840 aa13.08□□□□□ -0.32
DENND3-216ENST00000521477 ZPBP2Q6X784 338 aa13.08□□□□□ -0.32
DENND3-216ENST00000521477 MRPL10Q7Z7H8 261 aaKnown RBP13.08□□□□□ -0.32
DENND3-216ENST00000521477 ZNF598Q86UK7 904 aaKnown RBP13.08□□□□□ -0.32
DENND3-216ENST00000521477 FAM178BQ8IXR5 827 aa13.08□□□□□ -0.32
DENND3-216ENST00000521477 CCDC65Q8IXS2 484 aa13.08□□□□□ -0.32
DENND3-216ENST00000521477 FIBCD1Q8N539 461 aa13.08□□□□□ -0.32
DENND3-216ENST00000521477 TMEM161BQ8NDZ6 487 aa13.08□□□□□ -0.32
DENND3-216ENST00000521477 DDX12PQ92771 950 aa13.08□□□□□ -0.32
DENND3-216ENST00000521477 ZNF668Q96K58 619 aaPredicted RBP13.08□□□□□ -0.32
DENND3-216ENST00000521477 TGS1Q96RS0 853 aaKnown RBP13.08□□□□□ -0.32
DENND3-216ENST00000521477 PLVAPQ9BX97 442 aa13.08□□□□□ -0.32
DENND3-216ENST00000521477 TRIM6Q9C030 488 aaPredicted RBP13.08□□□□□ -0.32
DENND3-216ENST00000521477 ZNF576Q9H609 170 aa13.08□□□□□ -0.32
DENND3-216ENST00000521477 AAASQ9NRG9 546 aa13.08□□□□□ -0.32
DENND3-216ENST00000521477 KANSL3Q9P2N6 904 aa13.08□□□□□ -0.32
DENND3-216ENST00000521477 STK39Q9UEW8 545 aa13.08□□□□□ -0.32
DENND3-216ENST00000521477 HPSEQ9Y251 543 aa13.08□□□□□ -0.32
DENND3-216ENST00000521477 TNFSF13BQ9Y275 285 aa13.08□□□□□ -0.32
DENND3-216ENST00000521477 INPPL1O15357 1258 aa13.07□□□□□ -0.32
DENND3-216ENST00000521477 POLR2DO15514 142 aaKnown RBP13.07□□□□□ -0.32
DENND3-216ENST00000521477 TRAK2O60296 914 aa13.07□□□□□ -0.32
DENND3-216ENST00000521477 PFKFB1P16118 471 aa13.07□□□□□ -0.32
DENND3-216ENST00000521477 FGFR4P22455 802 aa13.07□□□□□ -0.32
DENND3-216ENST00000521477 SYKP43405 635 aa13.07□□□□□ -0.32
DENND3-216ENST00000521477 ERVK-21P61565 698 aa13.07□□□□□ -0.32
DENND3-216ENST00000521477 BTG3Q14201 252 aaPredicted RBP13.07□□□□□ -0.32
DENND3-216ENST00000521477 TMEM132AQ24JP5 1023 aa13.07□□□□□ -0.32
DENND3-216ENST00000521477 LRRC43Q8N309 656 aa13.07□□□□□ -0.32
DENND3-216ENST00000521477 MYCT1Q8N699 235 aa13.07□□□□□ -0.32
DENND3-216ENST00000521477 PDILTQ8N807 584 aa13.07□□□□□ -0.32
DENND3-216ENST00000521477 LRRC15Q8TF66 581 aa13.07□□□□□ -0.32
DENND3-216ENST00000521477 CLP1Q92989 425 aaKnown RBP13.07□□□□□ -0.32
DENND3-216ENST00000521477 DHX58Q96C10 678 aa13.07□□□□□ -0.32
DENND3-216ENST00000521477 LRCH3Q96II8 777 aa13.07□□□□□ -0.32
DENND3-216ENST00000521477 IPO9Q96P70 1041 aaKnown RBP13.07□□□□□ -0.32
DENND3-216ENST00000521477 C7orf25Q9BPX7 421 aa13.07□□□□□ -0.32
DENND3-216ENST00000521477 TRIM9Q9C026 710 aa13.07□□□□□ -0.32
DENND3-216ENST00000521477 NKX2-4Q9H2Z4 354 aa13.07□□□□□ -0.32
DENND3-216ENST00000521477 YBX2Q9Y2T7 364 aaKnown RBP13.07□□□□□ -0.32
DENND3-216ENST00000521477 GIT1Q9Y2X7 761 aa13.07□□□□□ -0.32
DENND3-216ENST00000521477 PCDHB2Q9Y5E7 798 aa13.07□□□□□ -0.32
DENND3-216ENST00000521477 A0A087X0B3 334 aa13.06□□□□□ -0.32
DENND3-216ENST00000521477 PVALEFA0A1B0GWK0 134 aa13.06□□□□□ -0.32
DENND3-216ENST00000521477 GRXCR1A8MXD5 290 aa13.06□□□□□ -0.32
DENND3-216ENST00000521477 C5orf67F2Z3F1 127 aa13.06□□□□□ -0.32
DENND3-216ENST00000521477 CSDE1O75534 798 aaKnown RBP13.06□□□□□ -0.32
DENND3-216ENST00000521477 UPP2O95045 317 aa13.06□□□□□ -0.32
DENND3-216ENST00000521477 PIGRP01833 764 aa13.06□□□□□ -0.32
DENND3-216ENST00000521477 RABGGTBP53611 331 aa13.06□□□□□ -0.32
DENND3-216ENST00000521477 GTF2BQ00403 316 aa13.06□□□□□ -0.32
DENND3-216ENST00000521477 TAP1Q03518 808 aa13.06□□□□□ -0.32
DENND3-216ENST00000521477 DHX8Q14562 1220 aaKnown RBP13.06□□□□□ -0.32
DENND3-216ENST00000521477 HSP90AA2PQ14568 343 aaPredicted RBP13.06□□□□□ -0.32
DENND3-216ENST00000521477 ATF7IP2Q5U623 682 aa13.06□□□□□ -0.32
DENND3-216ENST00000521477 GLB1LQ6UWU2 654 aa13.06□□□□□ -0.32
DENND3-216ENST00000521477 TMEM87AQ8NBN3 555 aa13.06□□□□□ -0.32
DENND3-216ENST00000521477 URGCPQ8TCY9 931 aa13.06□□□□□ -0.32
DENND3-216ENST00000521477 P2RX5Q93086 422 aa13.06□□□□□ -0.32
DENND3-216ENST00000521477 DNAJC19Q96DA6 116 aa13.06□□□□□ -0.32
DENND3-216ENST00000521477 GTPBP4Q9BZE4 634 aaKnown RBP13.06□□□□□ -0.32
DENND3-216ENST00000521477 LMCD1Q9NZU5 365 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms