RNA–Protein interactions for RNA: ENST00000521312.1

UBR5-209, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

TSL 3

Gene UBR5, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-209ENST00000521312 YOD1Q5VVQ6 348 aaPredicted RBP4.47□□□□□ -1.69
UBR5-209ENST00000521312 ANKS3Q6ZW76 656 aa4.47□□□□□ -1.69
UBR5-209ENST00000521312 ST13P5Q8NFI4 369 aaPredicted RBP4.47□□□□□ -1.69
UBR5-209ENST00000521312 UBXN4Q92575 508 aa4.47□□□□□ -1.69
UBR5-209ENST00000521312 C1QTNF7Q9BXJ2 289 aa4.47□□□□□ -1.69
UBR5-209ENST00000521312 KMT5AQ9NQR1 393 aa4.47□□□□□ -1.69
UBR5-209ENST00000521312 B3GALT1Q9Y5Z6 326 aa4.47□□□□□ -1.69
UBR5-209ENST00000521312 COL3A1P02461 1466 aaPredicted RBP4.46□□□□□ -1.7
UBR5-209ENST00000521312 HOXA3O43365 443 aaPredicted RBP4.46□□□□□ -1.7
UBR5-209ENST00000521312 KLF4O43474 513 aa4.46□□□□□ -1.7
UBR5-209ENST00000521312 DNAJC6O75061 913 aa4.46□□□□□ -1.7
UBR5-209ENST00000521312 STC2O76061 302 aa4.46□□□□□ -1.7
UBR5-209ENST00000521312 SLC6A3Q01959 620 aa4.46□□□□□ -1.7
UBR5-209ENST00000521312 BEAN1Q3B7T3 259 aa4.46□□□□□ -1.7
UBR5-209ENST00000521312 CATSPEREQ5SY80 951 aa4.46□□□□□ -1.7
UBR5-209ENST00000521312 LILRA3Q8N6C8 439 aaPredicted RBP4.46□□□□□ -1.7
UBR5-209ENST00000521312 OR52N2Q8NGI0 321 aa4.46□□□□□ -1.7
UBR5-209ENST00000521312 HNRNPLLQ8WVV9 542 aaKnown RBP4.46□□□□□ -1.7
UBR5-209ENST00000521312 DLG3Q92796 817 aa4.46□□□□□ -1.7
UBR5-209ENST00000521312 CDC6Q99741 560 aa4.46□□□□□ -1.7
UBR5-209ENST00000521312 HIRIP3Q9BW71 556 aaPredicted RBP4.46□□□□□ -1.7
UBR5-209ENST00000521312 DNAI1Q9UI46 699 aa4.46□□□□□ -1.7
UBR5-209ENST00000521312 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.46□□□□□ -1.7
UBR5-209ENST00000521312 CLCA2Q9UQC9 943 aa4.46□□□□□ -1.7
UBR5-209ENST00000521312 SLC12A8A0AV02 714 aa4.45□□□□□ -1.7
UBR5-209ENST00000521312 DIRC3C9JPN6 131 aa4.45□□□□□ -1.7
UBR5-209ENST00000521312 MAFGO15525 162 aa4.45□□□□□ -1.7
UBR5-209ENST00000521312 SPATA31D3P0C874 917 aa4.45□□□□□ -1.7
UBR5-209ENST00000521312 SUMO1P63165 101 aaKnown RBP4.45□□□□□ -1.7
UBR5-209ENST00000521312 DDR2Q16832 855 aa4.45□□□□□ -1.7
UBR5-209ENST00000521312 FAM214AQ32MH5 1076 aa4.45□□□□□ -1.7
UBR5-209ENST00000521312 TM4SF20Q53R12 229 aa4.45□□□□□ -1.7
UBR5-209ENST00000521312 SLFN12LQ6IEE8 588 aa4.45□□□□□ -1.7
UBR5-209ENST00000521312 SPATA31D4Q6ZUB0 917 aa4.45□□□□□ -1.7
UBR5-209ENST00000521312 BRAPQ7Z569 592 aa4.45□□□□□ -1.7
UBR5-209ENST00000521312 C1QL2Q7Z5L3 287 aa4.45□□□□□ -1.7
UBR5-209ENST00000521312 BMP8AQ7Z5Y6 402 aa4.45□□□□□ -1.7
UBR5-209ENST00000521312 RTN4RL1Q86UN2 441 aaPredicted RBP4.45□□□□□ -1.7
UBR5-209ENST00000521312 CKAP2LQ8IYA6 745 aa4.45□□□□□ -1.7
UBR5-209ENST00000521312 RPGRQ92834 1020 aaKnown RBP4.45□□□□□ -1.7
UBR5-209ENST00000521312 PCDHA9Q9Y5H5 950 aa4.45□□□□□ -1.7
UBR5-209ENST00000521312 PRLP01236 227 aa4.44□□□□□ -1.7
UBR5-209ENST00000521312 DDX6P26196 483 aaKnown RBP eCLIP4.44□□□□□ -1.7
UBR5-209ENST00000521312 RGS3P49796 1198 aa4.44□□□□□ -1.7
UBR5-209ENST00000521312 GABREP78334 506 aa4.44□□□□□ -1.7
UBR5-209ENST00000521312 SRSF4Q08170 494 aaKnown RBP4.44□□□□□ -1.7
UBR5-209ENST00000521312 RAB33AQ14088 237 aa4.44□□□□□ -1.7
UBR5-209ENST00000521312 MAN2A1Q16706 1144 aa4.44□□□□□ -1.7
UBR5-209ENST00000521312 ARHGEF25Q86VW2 580 aa4.44□□□□□ -1.7
UBR5-209ENST00000521312 CERS3Q8IU89 383 aa4.44□□□□□ -1.7
UBR5-209ENST00000521312 CPEB3Q8NE35 698 aaKnown RBP4.44□□□□□ -1.7
UBR5-209ENST00000521312 FOXRED1Q96CU9 486 aaPredicted RBP4.44□□□□□ -1.7
UBR5-209ENST00000521312 UIMC1Q96RL1 719 aa4.44□□□□□ -1.7
UBR5-209ENST00000521312 DNAJC2Q99543 621 aaKnown RBP4.44□□□□□ -1.7
UBR5-209ENST00000521312 RNF181Q9P0P0 153 aa4.44□□□□□ -1.7
UBR5-209ENST00000521312 SETD1BQ9UPS6 1966 aaKnown RBP4.44□□□□□ -1.7
UBR5-209ENST00000521312 UNC119BA6NIH7 251 aa4.43□□□□□ -1.7
UBR5-209ENST00000521312 RASGRP1O95267 797 aa4.43□□□□□ -1.7
UBR5-209ENST00000521312 MATN4O95460 622 aa4.43□□□□□ -1.7
UBR5-209ENST00000521312 CBSLP0DN79 551 aa4.43□□□□□ -1.7
UBR5-209ENST00000521312 HNRNPLP14866 589 aaKnown RBP eCLIP4.43□□□□□ -1.7
UBR5-209ENST00000521312 CBSP35520 551 aa4.43□□□□□ -1.7
UBR5-209ENST00000521312 SOGA3Q5TF21 947 aa4.43□□□□□ -1.7
UBR5-209ENST00000521312 SLC44A3Q8N4M1 653 aa4.43□□□□□ -1.7
UBR5-209ENST00000521312 CELF2-AS1Q8N7Q2 184 aa4.43□□□□□ -1.7
UBR5-209ENST00000521312 PMFBP1Q8TBY8 1022 aa4.43□□□□□ -1.7
UBR5-209ENST00000521312 ZNF778Q96MU6 729 aa4.43□□□□□ -1.7
UBR5-209ENST00000521312 ACSS2Q9NR19 701 aa4.43□□□□□ -1.7
UBR5-209ENST00000521312 SEMA4GQ9NTN9 838 aa4.43□□□□□ -1.7
UBR5-209ENST00000521312 POLR2AP24928 1970 aaKnown RBP4.43□□□□□ -1.7
UBR5-209ENST00000521312 PRR5-ARHGAP8B1AHC4 643 aa4.42□□□□□ -1.7
UBR5-209ENST00000521312 FSBPO95073 299 aa4.42□□□□□ -1.7
UBR5-209ENST00000521312 CRTAMO95727 393 aa4.42□□□□□ -1.7
UBR5-209ENST00000521312 FNTBP49356 437 aa4.42□□□□□ -1.7
UBR5-209ENST00000521312 WNT3AP56704 352 aa4.42□□□□□ -1.7
UBR5-209ENST00000521312 BCAR1P56945 870 aa4.42□□□□□ -1.7
UBR5-209ENST00000521312 PIK3R6Q5UE93 754 aa4.42□□□□□ -1.7
UBR5-209ENST00000521312 CC2D1AQ6P1N0 951 aaPredicted RBP4.42□□□□□ -1.7
UBR5-209ENST00000521312 DOK3Q7L591 496 aa4.42□□□□□ -1.7
UBR5-209ENST00000521312 OR5M3Q8NGP4 307 aa4.42□□□□□ -1.7
UBR5-209ENST00000521312 MAML3Q96JK9 1138 aa4.42□□□□□ -1.7
UBR5-209ENST00000521312 PKNOX2Q96KN3 472 aa4.42□□□□□ -1.7
UBR5-209ENST00000521312 TRIM55Q9BYV6 548 aa4.42□□□□□ -1.7
UBR5-209ENST00000521312 CPEB1Q9BZB8 566 aaKnown RBP4.42□□□□□ -1.7
UBR5-209ENST00000521312 HAPLN2Q9GZV7 340 aa4.42□□□□□ -1.7
UBR5-209ENST00000521312 DKK2Q9UBU2 259 aa4.42□□□□□ -1.7
UBR5-209ENST00000521312 TRBV23-1A0A0A0MS06 115 aa4.41□□□□□ -1.7
UBR5-209ENST00000521312 UBA6A0AVT1 1052 aaPredicted RBP4.41□□□□□ -1.7
UBR5-209ENST00000521312 PROP1O75360 226 aa4.41□□□□□ -1.7
UBR5-209ENST00000521312 MPLP40238 635 aa4.41□□□□□ -1.7
UBR5-209ENST00000521312 RNASE9P60153 205 aaKnown RBP4.41□□□□□ -1.7
UBR5-209ENST00000521312 IRF9Q00978 393 aa4.41□□□□□ -1.7
UBR5-209ENST00000521312 SERINC3Q13530 473 aa4.41□□□□□ -1.7
UBR5-209ENST00000521312 TTC38Q5R3I4 469 aa4.41□□□□□ -1.7
UBR5-209ENST00000521312 PRAMEF9Q5VWM5 478 aa4.41□□□□□ -1.7
UBR5-209ENST00000521312 ARMC6Q6NXE6 501 aa4.41□□□□□ -1.7
UBR5-209ENST00000521312 SPATA3Q8NHX4 192 aa4.41□□□□□ -1.7
UBR5-209ENST00000521312 WASF1Q92558 559 aa4.41□□□□□ -1.7
UBR5-209ENST00000521312 ZNF669Q96BR6 464 aaPredicted RBP4.41□□□□□ -1.7
UBR5-209ENST00000521312 CELF4Q9BZC1 486 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms