RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 HAUS3Q68CZ6 603 aa11.94□□□□□ -0.5
PVT1-209ENST00000520913 NOTUMQ6P988 496 aa11.94□□□□□ -0.5
PVT1-209ENST00000520913 CNNM3Q8NE01 707 aa11.94□□□□□ -0.5
PVT1-209ENST00000520913 PIGOQ8TEQ8 1089 aa11.94□□□□□ -0.5
PVT1-209ENST00000520913 CCDC51Q96ER9 411 aa11.94□□□□□ -0.5
PVT1-209ENST00000520913 NFKBIZQ9BYH8 718 aa11.94□□□□□ -0.5
PVT1-209ENST00000520913 EPHX3Q9H6B9 360 aa11.94□□□□□ -0.5
PVT1-209ENST00000520913 RSAD1Q9HA92 442 aa11.94□□□□□ -0.5
PVT1-209ENST00000520913 KIF3AQ9Y496 699 aa11.94□□□□□ -0.5
PVT1-209ENST00000520913 PCDHB2Q9Y5E7 798 aa11.94□□□□□ -0.5
PVT1-209ENST00000520913 CITO14578 2027 aa11.94□□□□□ -0.5
PVT1-209ENST00000520913 MYH15Q9Y2K3 1946 aa11.94□□□□□ -0.5
PVT1-209ENST00000520913 MEIS3P2A8K0S8 358 aa11.93□□□□□ -0.5
PVT1-209ENST00000520913 HIDE1A8MVS5 230 aa11.93□□□□□ -0.5
PVT1-209ENST00000520913 NT5C1B-RDH14C9J2C7 533 aa11.93□□□□□ -0.5
PVT1-209ENST00000520913 INO80B-WBP1J3KQ70 363 aa11.93□□□□□ -0.5
PVT1-209ENST00000520913 PER2O15055 1255 aa11.93□□□□□ -0.5
PVT1-209ENST00000520913 TSPAN1O60635 241 aa11.93□□□□□ -0.5
PVT1-209ENST00000520913 OFD1O75665 1012 aa11.93□□□□□ -0.5
PVT1-209ENST00000520913 XRCC6P12956 609 aaKnown RBP eCLIP11.93□□□□□ -0.5
PVT1-209ENST00000520913 ALADP13716 330 aa11.93□□□□□ -0.5
PVT1-209ENST00000520913 NCLP19338 710 aaKnown RBP11.93□□□□□ -0.5
PVT1-209ENST00000520913 HOXA11P31270 313 aaPredicted RBP11.93□□□□□ -0.5
PVT1-209ENST00000520913 CA8P35219 290 aa11.93□□□□□ -0.5
PVT1-209ENST00000520913 TECP42680 631 aa11.93□□□□□ -0.5
PVT1-209ENST00000520913 MBTD1Q05BQ5 628 aa11.93□□□□□ -0.5
PVT1-209ENST00000520913 NCBP1Q09161 790 aaKnown RBP11.93□□□□□ -0.5
PVT1-209ENST00000520913 BMS1Q14692 1282 aaKnown RBP11.93□□□□□ -0.5
PVT1-209ENST00000520913 UBXN11Q5T124 520 aa11.93□□□□□ -0.5
PVT1-209ENST00000520913 POTEGQ6S5H5 508 aa11.93□□□□□ -0.5
PVT1-209ENST00000520913 AGMOQ6ZNB7 445 aa11.93□□□□□ -0.5
PVT1-209ENST00000520913 MRPL10Q7Z7H8 261 aaKnown RBP11.93□□□□□ -0.5
PVT1-209ENST00000520913 MCPH1Q8NEM0 835 aa11.93□□□□□ -0.5
PVT1-209ENST00000520913 ASAP3Q8TDY4 903 aa11.93□□□□□ -0.5
PVT1-209ENST00000520913 POLR3CQ9BUI4 534 aaPredicted RBP11.93□□□□□ -0.5
PVT1-209ENST00000520913 GBP3Q9H0R5 595 aa11.93□□□□□ -0.5
PVT1-209ENST00000520913 ZBP1Q9H171 429 aa11.93□□□□□ -0.5
PVT1-209ENST00000520913 POLR3FQ9H1D9 316 aaPredicted RBP11.93□□□□□ -0.5
PVT1-209ENST00000520913 NRDE2Q9H7Z3 1164 aa11.93□□□□□ -0.5
PVT1-209ENST00000520913 UPF2Q9HAU5 1272 aaKnown RBP11.93□□□□□ -0.5
PVT1-209ENST00000520913 UBN1Q9NPG3 1134 aa11.93□□□□□ -0.5
PVT1-209ENST00000520913 DBR1Q9UK59 544 aaKnown RBP11.93□□□□□ -0.5
PVT1-209ENST00000520913 USP15Q9Y4E8 981 aaPredicted RBP11.93□□□□□ -0.5
PVT1-209ENST00000520913 ZMYM2Q9UBW7 1377 aa11.92□□□□□ -0.5
PVT1-209ENST00000520913 DCXO43602 365 aa11.92□□□□□ -0.5
PVT1-209ENST00000520913 GPR37L1O60883 481 aa11.92□□□□□ -0.5
PVT1-209ENST00000520913 MED24O75448 989 aa11.92□□□□□ -0.5
PVT1-209ENST00000520913 SPATA31C1P0DKV0 1188 aa11.92□□□□□ -0.5
PVT1-209ENST00000520913 ITGA4P13612 1032 aa11.92□□□□□ -0.5
PVT1-209ENST00000520913 MUTP22033 750 aa11.92□□□□□ -0.5
PVT1-209ENST00000520913 GLRA2P23416 452 aa11.92□□□□□ -0.5
PVT1-209ENST00000520913 RPA1P27694 616 aa11.92□□□□□ -0.5
PVT1-209ENST00000520913 ARL2P36404 184 aa11.92□□□□□ -0.5
PVT1-209ENST00000520913 KCNC3Q14003 757 aa11.92□□□□□ -0.5
PVT1-209ENST00000520913 ZNF174Q15697 407 aa11.92□□□□□ -0.5
PVT1-209ENST00000520913 TMEM184AQ6ZMB5 413 aa11.92□□□□□ -0.5
PVT1-209ENST00000520913 CATSPER3Q86XQ3 398 aa11.92□□□□□ -0.5
PVT1-209ENST00000520913 HACE1Q8IYU2 909 aa11.92□□□□□ -0.5
PVT1-209ENST00000520913 VN1R2Q8NFZ6 395 aa11.92□□□□□ -0.5
PVT1-209ENST00000520913 IGSF21Q96ID5 467 aa11.92□□□□□ -0.5
PVT1-209ENST00000520913 NACC1Q96RE7 527 aa11.92□□□□□ -0.5
PVT1-209ENST00000520913 LRFN3Q9BTN0 628 aa11.92□□□□□ -0.5
PVT1-209ENST00000520913 TRIM6Q9C030 488 aaPredicted RBP11.92□□□□□ -0.5
PVT1-209ENST00000520913 CSRNP2Q9H175 543 aa11.92□□□□□ -0.5
PVT1-209ENST00000520913 KANSL3Q9P2N6 904 aa11.92□□□□□ -0.5
PVT1-209ENST00000520913 DNAJB4Q9UDY4 337 aa11.92□□□□□ -0.5
PVT1-209ENST00000520913 STK39Q9UEW8 545 aa11.92□□□□□ -0.5
PVT1-209ENST00000520913 IPPQ9Y573 584 aa11.92□□□□□ -0.5
PVT1-209ENST00000520913 KMT2EQ8IZD2 1858 aa11.91□□□□□ -0.5
PVT1-209ENST00000520913 WDFY4Q6ZS81 3184 aa11.91□□□□□ -0.5
PVT1-209ENST00000520913 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.91□□□□□ -0.5
PVT1-209ENST00000520913 FAM86C2PA6NEL3 165 aa11.91□□□□□ -0.5
PVT1-209ENST00000520913 C2orf71A6NGG8 1288 aa11.91□□□□□ -0.5
PVT1-209ENST00000520913 LRRIQ4A6NIV6 560 aa11.91□□□□□ -0.5
PVT1-209ENST00000520913 GALTP07902 379 aa11.91□□□□□ -0.5
PVT1-209ENST00000520913 U2AF2P26368 475 aaKnown RBP eCLIP11.91□□□□□ -0.5
PVT1-209ENST00000520913 SLC11A1P49279 550 aa11.91□□□□□ -0.5
PVT1-209ENST00000520913 FXR2P51116 673 aaKnown RBP eCLIP11.91□□□□□ -0.5
PVT1-209ENST00000520913 RBM10P98175 930 aaKnown RBP11.91□□□□□ -0.5
PVT1-209ENST00000520913 GIT2Q14161 759 aa11.91□□□□□ -0.5
PVT1-209ENST00000520913 AMHR2Q16671 573 aa11.91□□□□□ -0.5
PVT1-209ENST00000520913 ANKRD54Q6NXT1 300 aa11.91□□□□□ -0.5
PVT1-209ENST00000520913 LLGL2Q6P1M3 1020 aa11.91□□□□□ -0.5
PVT1-209ENST00000520913 SLC27A1Q6PCB7 646 aa11.91□□□□□ -0.5
PVT1-209ENST00000520913 DDX53Q86TM3 631 aaKnown RBP11.91□□□□□ -0.5
PVT1-209ENST00000520913 TMEM173Q86WV6 379 aaPredicted RBP11.91□□□□□ -0.5
PVT1-209ENST00000520913 ZBTB8OSQ8IWT0 167 aa11.91□□□□□ -0.5
PVT1-209ENST00000520913 VPS52Q8N1B4 723 aa11.91□□□□□ -0.5
PVT1-209ENST00000520913 SMG8Q8ND04 991 aaKnown RBP11.91□□□□□ -0.5
PVT1-209ENST00000520913 CASP10Q92851 521 aa11.91□□□□□ -0.5
PVT1-209ENST00000520913 CPB2Q96IY4 423 aa11.91□□□□□ -0.5
PVT1-209ENST00000520913 PRIMPOLQ96LW4 560 aa11.91□□□□□ -0.5
PVT1-209ENST00000520913 FAM193BQ96PV7 902 aaPredicted RBP11.91□□□□□ -0.5
PVT1-209ENST00000520913 TMEM175Q9BSA9 504 aa11.91□□□□□ -0.5
PVT1-209ENST00000520913 EIF2AQ9BY44 585 aaKnown RBP11.91□□□□□ -0.5
PVT1-209ENST00000520913 RAB34Q9BZG1 259 aa11.91□□□□□ -0.5
PVT1-209ENST00000520913 C11orf16Q9NQ32 467 aa11.91□□□□□ -0.5
PVT1-209ENST00000520913 PRMT7Q9NVM4 692 aaPredicted RBP11.91□□□□□ -0.5
PVT1-209ENST00000520913 HCN4Q9Y3Q4 1203 aa11.91□□□□□ -0.5
PVT1-209ENST00000520913 HCFC2Q9Y5Z7 792 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms