RNA–Protein interactions for RNA: ENST00000520204.5

FAM49B-216, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5

Gene FAM49B, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-216ENST00000520204 ECM1Q16610 540 aa18.32■□□□□ 0.52
FAM49B-216ENST00000520204 TWF2Q6IBS0 349 aaKnown RBP18.32■□□□□ 0.52
FAM49B-216ENST00000520204 KCNT2Q6UVM3 1135 aa18.32■□□□□ 0.52
FAM49B-216ENST00000520204 MAEAQ7L5Y9 396 aa18.32■□□□□ 0.52
FAM49B-216ENST00000520204 ZNF598Q86UK7 904 aaKnown RBP18.32■□□□□ 0.52
FAM49B-216ENST00000520204 SMRP1Q8NCR6 262 aa18.32■□□□□ 0.52
FAM49B-216ENST00000520204 ASAP3Q8TDY4 903 aa18.32■□□□□ 0.52
FAM49B-216ENST00000520204 MRPS27Q92552 414 aaKnown RBP18.32■□□□□ 0.52
FAM49B-216ENST00000520204 TRAIPQ9BWF2 469 aa18.32■□□□□ 0.52
FAM49B-216ENST00000520204 BARX2Q9UMQ3 279 aaPredicted RBP18.32■□□□□ 0.52
FAM49B-216ENST00000520204 PLXNA4Q9HCM2 1894 aa18.31■□□□□ 0.52
FAM49B-216ENST00000520204 ARHGEF35A5YM69 484 aa18.31■□□□□ 0.52
FAM49B-216ENST00000520204 PDCP20941 246 aa18.31■□□□□ 0.52
FAM49B-216ENST00000520204 PPM1AP35813 382 aa18.31■□□□□ 0.52
FAM49B-216ENST00000520204 PTENP60484 403 aa18.31■□□□□ 0.52
FAM49B-216ENST00000520204 ATP2C1P98194 919 aaPredicted RBP18.31■□□□□ 0.52
FAM49B-216ENST00000520204 KRT17Q04695 432 aa18.31■□□□□ 0.52
FAM49B-216ENST00000520204 POU5F1BQ06416 359 aa18.31■□□□□ 0.52
FAM49B-216ENST00000520204 DUSP6Q16828 381 aa18.31■□□□□ 0.52
FAM49B-216ENST00000520204 PPP4R3CPQ6ZMV5 832 aa18.31■□□□□ 0.52
FAM49B-216ENST00000520204 LRRC43Q8N309 656 aa18.31■□□□□ 0.52
FAM49B-216ENST00000520204 MCPH1Q8NEM0 835 aa18.31■□□□□ 0.52
FAM49B-216ENST00000520204 SNX29Q8TEQ0 813 aa18.31■□□□□ 0.52
FAM49B-216ENST00000520204 ZNF558Q96NG5 402 aa18.31■□□□□ 0.52
FAM49B-216ENST00000520204 POLR3FQ9H1D9 316 aaPredicted RBP18.31■□□□□ 0.52
FAM49B-216ENST00000520204 KIAA1024Q9UPX6 916 aa18.31■□□□□ 0.52
FAM49B-216ENST00000520204 C5orf42Q9H799 3197 aa18.31■□□□□ 0.52
FAM49B-216ENST00000520204 VPS37CA5D8V6 355 aaPredicted RBP18.3■□□□□ 0.52
FAM49B-216ENST00000520204 PP2D1A8MPX8 630 aa18.3■□□□□ 0.52
FAM49B-216ENST00000520204 K7ELQ4 463 aaPredicted RBP18.3■□□□□ 0.52
FAM49B-216ENST00000520204 SKIP12755 728 aa18.3■□□□□ 0.52
FAM49B-216ENST00000520204 ATF7P17544 494 aaPredicted RBP18.3■□□□□ 0.52
FAM49B-216ENST00000520204 GLRA2P23416 452 aa18.3■□□□□ 0.52
FAM49B-216ENST00000520204 CAPSQ13938 189 aa18.3■□□□□ 0.52
FAM49B-216ENST00000520204 KRT79Q5XKE5 535 aa18.3■□□□□ 0.52
FAM49B-216ENST00000520204 PADI6Q6TGC4 694 aa18.3■□□□□ 0.52
FAM49B-216ENST00000520204 BRAPQ7Z569 592 aa18.3■□□□□ 0.52
FAM49B-216ENST00000520204 RNF135Q8IUD6 432 aa18.3■□□□□ 0.52
FAM49B-216ENST00000520204 INTS4Q96HW7 963 aaKnown RBP18.3■□□□□ 0.52
FAM49B-216ENST00000520204 NGRNQ9NPE2 291 aaKnown RBP18.3■□□□□ 0.52
FAM49B-216ENST00000520204 GPRC5CQ9NQ84 441 aa18.3■□□□□ 0.52
FAM49B-216ENST00000520204 AGPAT5Q9NUQ2 364 aa18.3■□□□□ 0.52
FAM49B-216ENST00000520204 SPG21Q9NZD8 308 aa18.3■□□□□ 0.52
FAM49B-216ENST00000520204 ZNF623O75123 536 aa18.29■□□□□ 0.52
FAM49B-216ENST00000520204 CYP11B2P19099 503 aa18.29■□□□□ 0.52
FAM49B-216ENST00000520204 CDC25AP30304 524 aa18.29■□□□□ 0.52
FAM49B-216ENST00000520204 HOXA11P31270 313 aaPredicted RBP18.29■□□□□ 0.52
FAM49B-216ENST00000520204 HERC4Q5GLZ8 1057 aaPredicted RBP18.29■□□□□ 0.52
FAM49B-216ENST00000520204 CLLU1OSQ5K130 101 aa18.29■□□□□ 0.52
FAM49B-216ENST00000520204 PLPP4Q5VZY2 271 aa18.29■□□□□ 0.52
FAM49B-216ENST00000520204 IFNLR1Q8IU57 520 aaPredicted RBP18.29■□□□□ 0.52
FAM49B-216ENST00000520204 HELQQ8TDG4 1101 aa18.29■□□□□ 0.52
FAM49B-216ENST00000520204 TCF25Q9BQ70 676 aa18.29■□□□□ 0.52
FAM49B-216ENST00000520204 ENTPD7Q9NQZ7 604 aa18.29■□□□□ 0.52
FAM49B-216ENST00000520204 FAM105AQ9NUU6 356 aa18.29■□□□□ 0.52
FAM49B-216ENST00000520204 DDX19AQ9NUU7 478 aaKnown RBP18.29■□□□□ 0.52
FAM49B-216ENST00000520204 MUTYHQ9UIF7 546 aa18.29■□□□□ 0.52
FAM49B-216ENST00000520204 USP15Q9Y4E8 981 aaPredicted RBP18.29■□□□□ 0.52
FAM49B-216ENST00000520204 INO80B-WBP1J3KQ70 363 aa18.28■□□□□ 0.52
FAM49B-216ENST00000520204 SRGAP2BP0DMP2 458 aa18.28■□□□□ 0.52
FAM49B-216ENST00000520204 RAB27AP51159 221 aa18.28■□□□□ 0.52
FAM49B-216ENST00000520204 RBM10P98175 930 aaKnown RBP18.28■□□□□ 0.52
FAM49B-216ENST00000520204 PCBP1Q15365 356 aaKnown RBP eCLIP18.28■□□□□ 0.524e-6■■■■■ 36.2
FAM49B-216ENST00000520204 ARL6IP4Q66PJ3 421 aaKnown RBP18.28■□□□□ 0.52
FAM49B-216ENST00000520204 TMEM184AQ6ZMB5 413 aa18.28■□□□□ 0.52
FAM49B-216ENST00000520204 TMC7Q7Z402 723 aa18.28■□□□□ 0.52
FAM49B-216ENST00000520204 VN1R2Q8NFZ6 395 aa18.28■□□□□ 0.52
FAM49B-216ENST00000520204 MMTAG2Q9BU76 263 aaKnown RBP18.28■□□□□ 0.52
FAM49B-216ENST00000520204 MRPL9Q9BYD2 267 aaKnown RBP18.28■□□□□ 0.52
FAM49B-216ENST00000520204 NFKBIZQ9BYH8 718 aa18.28■□□□□ 0.52
FAM49B-216ENST00000520204 BHMT2Q9H2M3 363 aa18.28■□□□□ 0.52
FAM49B-216ENST00000520204 FOXD4L1Q9NU39 408 aa18.28■□□□□ 0.52
FAM49B-216ENST00000520204 DNM3Q9UQ16 869 aa18.28■□□□□ 0.52
FAM49B-216ENST00000520204 VWA3AA6NCI4 1184 aa18.27■□□□□ 0.52
FAM49B-216ENST00000520204 LOC730098B7Z3J9 87 aa18.27■□□□□ 0.52
FAM49B-216ENST00000520204 ERLIN2O94905 339 aa18.27■□□□□ 0.52
FAM49B-216ENST00000520204 SYT1P21579 422 aa18.27■□□□□ 0.52
FAM49B-216ENST00000520204 AXLP30530 894 aa18.27■□□□□ 0.52
FAM49B-216ENST00000520204 PBX3P40426 434 aa18.27■□□□□ 0.52
FAM49B-216ENST00000520204 MBTD1Q05BQ5 628 aa18.27■□□□□ 0.52
FAM49B-216ENST00000520204 NCBP1Q09161 790 aaKnown RBP18.27■□□□□ 0.52
FAM49B-216ENST00000520204 KCNC3Q14003 757 aa18.27■□□□□ 0.52
FAM49B-216ENST00000520204 LONRF3Q496Y0 759 aa18.27■□□□□ 0.52
FAM49B-216ENST00000520204 RSPH1Q8WYR4 309 aa18.27■□□□□ 0.52
FAM49B-216ENST00000520204 LPPQ93052 612 aa18.27■□□□□ 0.52
FAM49B-216ENST00000520204 SNX21Q969T3 373 aa18.27■□□□□ 0.52
FAM49B-216ENST00000520204 PHF7Q9BWX1 381 aaPredicted RBP18.27■□□□□ 0.52
FAM49B-216ENST00000520204 PCDHB2Q9Y5E7 798 aa18.27■□□□□ 0.52
FAM49B-216ENST00000520204 LRRIQ4A6NIV6 560 aa18.26■□□□□ 0.51
FAM49B-216ENST00000520204 HIDE1A8MVS5 230 aa18.26■□□□□ 0.51
FAM49B-216ENST00000520204 E9PMD0 336 aa18.26■□□□□ 0.51
FAM49B-216ENST00000520204 TSPAN1O60635 241 aa18.26■□□□□ 0.51
FAM49B-216ENST00000520204 ALDH7A1P49419 539 aaKnown RBP18.26■□□□□ 0.51
FAM49B-216ENST00000520204 CBX2Q14781 532 aaPredicted RBP18.26■□□□□ 0.51
FAM49B-216ENST00000520204 AMHR2Q16671 573 aa18.26■□□□□ 0.51
FAM49B-216ENST00000520204 UBXN11Q5T124 520 aa18.26■□□□□ 0.51
FAM49B-216ENST00000520204 MRPL10Q7Z7H8 261 aaKnown RBP18.26■□□□□ 0.51
FAM49B-216ENST00000520204 SLC39A11Q8N1S5 342 aa18.26■□□□□ 0.51
FAM49B-216ENST00000520204 SUSD6Q92537 303 aa18.26■□□□□ 0.51
FAM49B-216ENST00000520204 EDAQ92838 391 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms