RNA–Protein interactions for RNA: ENST00000520008.5

POLB-208, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-208ENST00000520008 PSPC1Q8WXF1 523 aaKnown RBP13.19□□□□□ -0.3
POLB-208ENST00000520008 TNFRSF25Q93038 417 aa13.19□□□□□ -0.3
POLB-208ENST00000520008 CEP170P1Q96L14 293 aa13.19□□□□□ -0.3
POLB-208ENST00000520008 PDRG1Q9NUG6 133 aa13.19□□□□□ -0.3
POLB-208ENST00000520008 TPCN1Q9ULQ1 816 aa13.19□□□□□ -0.3
POLB-208ENST00000520008 SORCS3Q9UPU3 1222 aa13.19□□□□□ -0.3
POLB-208ENST00000520008 INPP5FQ9Y2H2 1132 aa13.19□□□□□ -0.3
POLB-208ENST00000520008 C2orf16Q68DN1 1984 aa13.19□□□□□ -0.3
POLB-208ENST00000520008 CNTNAP2Q9UHC6 1331 aa13.18□□□□□ -0.3
POLB-208ENST00000520008 GAS2O43903 313 aaKnown RBP13.18□□□□□ -0.3
POLB-208ENST00000520008 LILRB3O75022 631 aa13.18□□□□□ -0.3
POLB-208ENST00000520008 DDHD2O94830 711 aa13.18□□□□□ -0.3
POLB-208ENST00000520008 BRD1O95696 1058 aa13.18□□□□□ -0.3
POLB-208ENST00000520008 EFEMP2O95967 443 aa13.18□□□□□ -0.3
POLB-208ENST00000520008 WEE2P0C1S8 567 aa13.18□□□□□ -0.3
POLB-208ENST00000520008 AVPR2P30518 371 aa13.18□□□□□ -0.3
POLB-208ENST00000520008 YWHABP31946 246 aaKnown RBP13.18□□□□□ -0.3
POLB-208ENST00000520008 LAMTOR4Q0VGL1 99 aa13.18□□□□□ -0.3
POLB-208ENST00000520008 MTMR3Q13615 1198 aa13.18□□□□□ -0.3
POLB-208ENST00000520008 BMS1Q14692 1282 aaKnown RBP13.18□□□□□ -0.3
POLB-208ENST00000520008 EMC2Q15006 297 aa13.18□□□□□ -0.3
POLB-208ENST00000520008 PIK3AP1Q6ZUJ8 805 aa13.18□□□□□ -0.3
POLB-208ENST00000520008 EXOC8Q8IYI6 725 aa13.18□□□□□ -0.3
POLB-208ENST00000520008 UBALD2Q8IYN6 164 aa13.18□□□□□ -0.3
POLB-208ENST00000520008 ZDHHC14Q8IZN3 488 aa13.18□□□□□ -0.3
POLB-208ENST00000520008 C12orf76Q8N812 135 aaPredicted RBP13.18□□□□□ -0.3
POLB-208ENST00000520008 KREMEN2Q8NCW0 462 aa13.18□□□□□ -0.3
POLB-208ENST00000520008 TMEM143Q96AN5 459 aa13.18□□□□□ -0.3
POLB-208ENST00000520008 PGBD4Q96DM1 585 aa13.18□□□□□ -0.3
POLB-208ENST00000520008 RIPOR3Q96MK2 946 aa13.18□□□□□ -0.3
POLB-208ENST00000520008 RSAD1Q9HA92 442 aa13.18□□□□□ -0.3
POLB-208ENST00000520008 XPNPEP1Q9NQW7 623 aa13.18□□□□□ -0.3
POLB-208ENST00000520008 USTQ9Y2C2 406 aa13.18□□□□□ -0.3
POLB-208ENST00000520008 CACNA1HO95180 2353 aa13.18□□□□□ -0.3
POLB-208ENST00000520008 PLXNA3P51805 1871 aa13.17□□□□□ -0.3
POLB-208ENST00000520008 FAM205CA6NFA0 338 aa13.17□□□□□ -0.3
POLB-208ENST00000520008 CCNT1O60563 726 aaKnown RBP13.17□□□□□ -0.3
POLB-208ENST00000520008 FDPSP14324 419 aaKnown RBP13.17□□□□□ -0.3
POLB-208ENST00000520008 NCLP19338 710 aaKnown RBP13.17□□□□□ -0.3
POLB-208ENST00000520008 CLCN4P51793 760 aa13.17□□□□□ -0.3
POLB-208ENST00000520008 RNASELQ05823 741 aaKnown RBP13.17□□□□□ -0.3
POLB-208ENST00000520008 RARS2Q5T160 578 aaKnown RBP13.17□□□□□ -0.3
POLB-208ENST00000520008 KANK3Q6NY19 840 aa13.17□□□□□ -0.3
POLB-208ENST00000520008 FERMT3Q86UX7 667 aa13.17□□□□□ -0.3
POLB-208ENST00000520008 IFNLR1Q8IU57 520 aaPredicted RBP13.17□□□□□ -0.3
POLB-208ENST00000520008 RNF168Q8IYW5 571 aaPredicted RBP13.17□□□□□ -0.3
POLB-208ENST00000520008 SMG8Q8ND04 991 aaKnown RBP13.17□□□□□ -0.3
POLB-208ENST00000520008 NAP1L4Q99733 375 aaKnown RBP13.17□□□□□ -0.3
POLB-208ENST00000520008 TMEM175Q9BSA9 504 aa13.17□□□□□ -0.3
POLB-208ENST00000520008 SMOC2Q9H3U7 446 aa13.17□□□□□ -0.3
POLB-208ENST00000520008 TSHZ2Q9NRE2 1034 aa13.17□□□□□ -0.3
POLB-208ENST00000520008 MARCH5Q9NX47 278 aa13.17□□□□□ -0.3
POLB-208ENST00000520008 RGL1Q9NZL6 768 aa13.17□□□□□ -0.3
POLB-208ENST00000520008 STK39Q9UEW8 545 aa13.17□□□□□ -0.3
POLB-208ENST00000520008 ZBTB39O15060 712 aa13.16□□□□□ -0.3
POLB-208ENST00000520008 ASAP2O43150 1006 aa13.16□□□□□ -0.3
POLB-208ENST00000520008 TSPAN1O60635 241 aa13.16□□□□□ -0.3
POLB-208ENST00000520008 DTNBO60941 627 aa13.16□□□□□ -0.3
POLB-208ENST00000520008 SLITRK3O94933 977 aa13.16□□□□□ -0.3
POLB-208ENST00000520008 LYPLA2O95372 231 aa13.16□□□□□ -0.3
POLB-208ENST00000520008 SRGAP2CP0DJJ0 459 aa13.16□□□□□ -0.3
POLB-208ENST00000520008 XBP1P17861 261 aa13.16□□□□□ -0.3
POLB-208ENST00000520008 CA8P35219 290 aa13.16□□□□□ -0.3
POLB-208ENST00000520008 NUBP1P53384 320 aa13.16□□□□□ -0.3
POLB-208ENST00000520008 DSC1Q08554 894 aa13.16□□□□□ -0.3
POLB-208ENST00000520008 PCBP1Q15365 356 aaKnown RBP eCLIP13.16□□□□□ -0.3
POLB-208ENST00000520008 GPR149Q86SP6 731 aa13.16□□□□□ -0.3
POLB-208ENST00000520008 PPFIBP1Q86W92 1011 aa13.16□□□□□ -0.3
POLB-208ENST00000520008 SLFN12Q8IYM2 578 aa13.16□□□□□ -0.3
POLB-208ENST00000520008 TDRD5Q8NAT2 981 aaKnown RBP13.16□□□□□ -0.3
POLB-208ENST00000520008 RNF149Q8NC42 400 aa13.16□□□□□ -0.3
POLB-208ENST00000520008 URGCPQ8TCY9 931 aa13.16□□□□□ -0.3
POLB-208ENST00000520008 TCP11Q8WWU5 503 aa13.16□□□□□ -0.3
POLB-208ENST00000520008 DYDC2Q96IM9 177 aa13.16□□□□□ -0.3
POLB-208ENST00000520008 KLHL5Q96PQ7 755 aa13.16□□□□□ -0.3
POLB-208ENST00000520008 GBP3Q9H0R5 595 aa13.16□□□□□ -0.3
POLB-208ENST00000520008 SLKQ9H2G2 1235 aaPredicted RBP13.16□□□□□ -0.3
POLB-208ENST00000520008 ZSWIM4Q9H7M6 989 aa13.16□□□□□ -0.3
POLB-208ENST00000520008 SFXN1Q9H9B4 322 aa13.16□□□□□ -0.3
POLB-208ENST00000520008 BMP2KQ9NSY1 1161 aaPredicted RBP13.16□□□□□ -0.3
POLB-208ENST00000520008 KANSL3Q9P2N6 904 aa13.16□□□□□ -0.3
POLB-208ENST00000520008 MYO10Q9HD67 2058 aa13.16□□□□□ -0.3
POLB-208ENST00000520008 NRP1O14786 923 aa13.15□□□□□ -0.3
POLB-208ENST00000520008 SOD2P04179 222 aa13.15□□□□□ -0.3
POLB-208ENST00000520008 ASGR2P07307 311 aa13.15□□□□□ -0.3
POLB-208ENST00000520008 CNPP09543 421 aaKnown RBP13.15□□□□□ -0.3
POLB-208ENST00000520008 PTENP60484 403 aa13.15□□□□□ -0.3
POLB-208ENST00000520008 CYP4A11Q02928 519 aa13.15□□□□□ -0.3
POLB-208ENST00000520008 POU5F1BQ06416 359 aa13.15□□□□□ -0.3
POLB-208ENST00000520008 NR5A1Q13285 461 aa13.15□□□□□ -0.3
POLB-208ENST00000520008 CTTNQ14247 550 aaKnown RBP13.15□□□□□ -0.3
POLB-208ENST00000520008 AMHR2Q16671 573 aa13.15□□□□□ -0.3
POLB-208ENST00000520008 ATAT1Q5SQI0 421 aa13.15□□□□□ -0.3
POLB-208ENST00000520008 NCAPH2Q6IBW4 605 aa13.15□□□□□ -0.3
POLB-208ENST00000520008 OTUD6AQ7L8S5 288 aa13.15□□□□□ -0.3
POLB-208ENST00000520008 ZBTB33Q86T24 672 aa13.15□□□□□ -0.3
POLB-208ENST00000520008 COLGALT2Q8IYK4 626 aa13.15□□□□□ -0.3
POLB-208ENST00000520008 CNNM3Q8NE01 707 aa13.15□□□□□ -0.3
POLB-208ENST00000520008 MTRQ99707 1265 aa13.15□□□□□ -0.3
POLB-208ENST00000520008 HSD17B14Q9BPX1 270 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms