RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 TMED1Q13445 227 aa14.53□□□□□ -0.08
PABPC1-208ENST00000519004 RRP1BQ14684 758 aaKnown RBP14.53□□□□□ -0.08
PABPC1-208ENST00000519004 TMEM259Q4ZIN3 620 aa14.53□□□□□ -0.08
PABPC1-208ENST00000519004 ARHGEF18Q6ZSZ5 1173 aa14.53□□□□□ -0.08
PABPC1-208ENST00000519004 SCUBE1Q8IWY4 988 aa14.53□□□□□ -0.08
PABPC1-208ENST00000519004 SLF2Q8IX21 1173 aa14.53□□□□□ -0.08
PABPC1-208ENST00000519004 SLC15A3Q8IY34 581 aa14.53□□□□□ -0.08
PABPC1-208ENST00000519004 ST13P4Q8IZP2 240 aaPredicted RBP14.53□□□□□ -0.08
PABPC1-208ENST00000519004 ARL10Q8N8L6 244 aa14.53□□□□□ -0.08
PABPC1-208ENST00000519004 PLBD2Q8NHP8 589 aa14.53□□□□□ -0.08
PABPC1-208ENST00000519004 C10orf82Q8WW14 230 aa14.53□□□□□ -0.08
PABPC1-208ENST00000519004 NMD3Q96D46 503 aaKnown RBP14.53□□□□□ -0.08
PABPC1-208ENST00000519004 RASAL2Q9UJF2 1139 aa14.53□□□□□ -0.08
PABPC1-208ENST00000519004 NENFQ9UMX5 172 aa14.53□□□□□ -0.08
PABPC1-208ENST00000519004 CNTNAP5Q8WYK1 1306 aa14.53□□□□□ -0.08
PABPC1-208ENST00000519004 POTEFA5A3E0 1075 aa14.52□□□□□ -0.08
PABPC1-208ENST00000519004 GSG1L2A8MUP6 293 aa14.52□□□□□ -0.08
PABPC1-208ENST00000519004 POTEIP0CG38 1075 aa14.52□□□□□ -0.08
PABPC1-208ENST00000519004 IDO1P14902 403 aa14.52□□□□□ -0.08
PABPC1-208ENST00000519004 ALOX15P16050 662 aaPredicted RBP14.52□□□□□ -0.08
PABPC1-208ENST00000519004 PAX3P23760 479 aa14.52□□□□□ -0.08
PABPC1-208ENST00000519004 ADARP55265 1226 aaKnown RBP14.52□□□□□ -0.08
PABPC1-208ENST00000519004 CTC1Q2NKJ3 1217 aa14.52□□□□□ -0.08
PABPC1-208ENST00000519004 CCDC92Q53HC0 331 aaPredicted RBP14.52□□□□□ -0.08
PABPC1-208ENST00000519004 POTEEQ6S8J3 1075 aa14.52□□□□□ -0.08
PABPC1-208ENST00000519004 SYCE1Q8N0S2 351 aa14.52□□□□□ -0.08
PABPC1-208ENST00000519004 RUNDC3BQ96NL0 473 aa14.52□□□□□ -0.08
PABPC1-208ENST00000519004 AGAP3Q96P47 875 aa14.52□□□□□ -0.08
PABPC1-208ENST00000519004 GANQ9H2C0 597 aa14.52□□□□□ -0.08
PABPC1-208ENST00000519004 PTTG2Q9NZH5 202 aa14.52□□□□□ -0.08
PABPC1-208ENST00000519004 PHTF1Q9UMS5 762 aa14.52□□□□□ -0.08
PABPC1-208ENST00000519004 ADAMTS7Q9UKP4 1686 aa14.52□□□□□ -0.09
PABPC1-208ENST00000519004 NBPF26B4DH59 902 aa14.52□□□□□ -0.09
PABPC1-208ENST00000519004 MAGEB2O15479 319 aa14.52□□□□□ -0.09
PABPC1-208ENST00000519004 ZFXP17010 805 aaPredicted RBP14.52□□□□□ -0.09
PABPC1-208ENST00000519004 YY1P25490 414 aa14.52□□□□□ -0.09
PABPC1-208ENST00000519004 EMP3P54852 163 aa14.52□□□□□ -0.09
PABPC1-208ENST00000519004 TNIP1Q15025 636 aa14.52□□□□□ -0.09
PABPC1-208ENST00000519004 EXOC3L4Q17RC7 722 aa14.52□□□□□ -0.09
PABPC1-208ENST00000519004 KBTBD12Q3ZCT8 623 aa14.52□□□□□ -0.09
PABPC1-208ENST00000519004 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.52□□□□□ -0.09
PABPC1-208ENST00000519004 ALKBH5Q6P6C2 394 aaKnown RBP14.52□□□□□ -0.09
PABPC1-208ENST00000519004 IZUMO2Q6UXV1 221 aa14.52□□□□□ -0.09
PABPC1-208ENST00000519004 IRF2BP2Q7Z5L9 587 aa14.52□□□□□ -0.09
PABPC1-208ENST00000519004 PPP2R3CQ969Q6 453 aa14.52□□□□□ -0.09
PABPC1-208ENST00000519004 C18orf8Q96DM3 657 aa14.52□□□□□ -0.09
PABPC1-208ENST00000519004 UNC45AQ9H3U1 944 aa14.52□□□□□ -0.09
PABPC1-208ENST00000519004 PARP2Q9UGN5 583 aa14.52□□□□□ -0.09
PABPC1-208ENST00000519004 AMFRQ9UKV5 643 aa14.52□□□□□ -0.09
PABPC1-208ENST00000519004 CCDC88AQ3V6T2 1871 aa14.52□□□□□ -0.09
PABPC1-208ENST00000519004 FAM205AQ6ZU69 1335 aa14.52□□□□□ -0.09
PABPC1-208ENST00000519004 A0A0A6YYK5 440 aaPredicted RBP14.51□□□□□ -0.09
PABPC1-208ENST00000519004 BTBD19C9JJ37 291 aa14.51□□□□□ -0.09
PABPC1-208ENST00000519004 MAGEB3O15480 346 aa14.51□□□□□ -0.09
PABPC1-208ENST00000519004 EXOC3O60645 756 aa14.51□□□□□ -0.09
PABPC1-208ENST00000519004 OR6B1O95007 311 aa14.51□□□□□ -0.09
PABPC1-208ENST00000519004 ASMTLO95671 621 aa14.51□□□□□ -0.09
PABPC1-208ENST00000519004 NPM1P06748 294 aaKnown RBP eCLIP14.51□□□□□ -0.09
PABPC1-208ENST00000519004 VEGFAP15692 232 aaPredicted RBP14.51□□□□□ -0.09
PABPC1-208ENST00000519004 GSTM4Q03013 218 aa14.51□□□□□ -0.09
PABPC1-208ENST00000519004 LRRC63Q05C16 580 aa14.51□□□□□ -0.09
PABPC1-208ENST00000519004 PRPF4BQ13523 1007 aaKnown RBP14.51□□□□□ -0.09
PABPC1-208ENST00000519004 TXNRD1Q16881 649 aa14.51□□□□□ -0.09
PABPC1-208ENST00000519004 SYDE2Q5VT97 1194 aa14.51□□□□□ -0.09
PABPC1-208ENST00000519004 SPOCK2Q92563 424 aa14.51□□□□□ -0.09
PABPC1-208ENST00000519004 SMC6Q96SB8 1091 aa14.51□□□□□ -0.09
PABPC1-208ENST00000519004 SETDB2Q96T68 719 aa14.51□□□□□ -0.09
PABPC1-208ENST00000519004 CDC42EP4Q9H3Q1 356 aaKnown RBP14.51□□□□□ -0.09
PABPC1-208ENST00000519004 ARMT1Q9H993 441 aa14.51□□□□□ -0.09
PABPC1-208ENST00000519004 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.51□□□□□ -0.09
PABPC1-208ENST00000519004 NUMBLQ9Y6R0 609 aa14.51□□□□□ -0.09
PABPC1-208ENST00000519004 WNK3Q9BYP7 1800 aa14.51□□□□□ -0.09
PABPC1-208ENST00000519004 ANKRD63C9JTQ0 380 aa14.51□□□□□ -0.09
PABPC1-208ENST00000519004 GSC2O15499 205 aa14.51□□□□□ -0.09
PABPC1-208ENST00000519004 PRKAB2O43741 272 aa14.51□□□□□ -0.09
PABPC1-208ENST00000519004 MLH1P40692 756 aa14.51□□□□□ -0.09
PABPC1-208ENST00000519004 TXKP42681 527 aa14.51□□□□□ -0.09
PABPC1-208ENST00000519004 WDR4P57081 412 aaKnown RBP14.51□□□□□ -0.09
PABPC1-208ENST00000519004 DNAJC3Q13217 504 aa14.51□□□□□ -0.09
PABPC1-208ENST00000519004 SH3D19Q5HYK7 790 aa14.51□□□□□ -0.09
PABPC1-208ENST00000519004 CFAP157Q5JU67 520 aa14.51□□□□□ -0.09
PABPC1-208ENST00000519004 RINLQ6ZS11 566 aa14.51□□□□□ -0.09
PABPC1-208ENST00000519004 TMTC3Q6ZXV5 915 aa14.51□□□□□ -0.09
PABPC1-208ENST00000519004 CABP7Q86V35 215 aa14.51□□□□□ -0.09
PABPC1-208ENST00000519004 SATL1Q86VE3 508 aa14.51□□□□□ -0.09
PABPC1-208ENST00000519004 MAP7D3Q8IWC1 876 aa14.51□□□□□ -0.09
PABPC1-208ENST00000519004 GUF1Q8N442 669 aaKnown RBP14.51□□□□□ -0.09
PABPC1-208ENST00000519004 RSPH1Q8WYR4 309 aa14.51□□□□□ -0.09
PABPC1-208ENST00000519004 ZNF496Q96IT1 587 aaPredicted RBP14.51□□□□□ -0.09
PABPC1-208ENST00000519004 ECSITQ9BQ95 431 aa14.51□□□□□ -0.09
PABPC1-208ENST00000519004 SAR1AQ9NR31 198 aa14.51□□□□□ -0.09
PABPC1-208ENST00000519004 ARHGEF38Q9NXL2 777 aa14.51□□□□□ -0.09
PABPC1-208ENST00000519004 NKIRAS1Q9NYS0 192 aa14.51□□□□□ -0.09
PABPC1-208ENST00000519004 CLIC5Q9NZA1 410 aa14.51□□□□□ -0.09
PABPC1-208ENST00000519004 SMIM31A0A1B0GVY4 71 aa14.5□□□□□ -0.09
PABPC1-208ENST00000519004 HNRNPCL1O60812 293 aaKnown RBP14.5□□□□□ -0.09
PABPC1-208ENST00000519004 GALK1P51570 392 aa14.5□□□□□ -0.09
PABPC1-208ENST00000519004 NPEPPSP55786 919 aa14.5□□□□□ -0.09
PABPC1-208ENST00000519004 DSG1Q02413 1049 aa14.5□□□□□ -0.09
PABPC1-208ENST00000519004 MAP3K10Q02779 954 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms