RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 ABCD1P33897 745 aa14.31□□□□□ -0.12
PABPC1-205ENST00000518196 NPTX2P47972 431 aa14.31□□□□□ -0.12
PABPC1-205ENST00000518196 EFNA5P52803 228 aa14.31□□□□□ -0.12
PABPC1-205ENST00000518196 PNOCQ13519 176 aa14.31□□□□□ -0.12
PABPC1-205ENST00000518196 TMEM132AQ24JP5 1023 aa14.31□□□□□ -0.12
PABPC1-205ENST00000518196 SKOR2Q2VWA4 1001 aaPredicted RBP14.31□□□□□ -0.12
PABPC1-205ENST00000518196 PROX2Q3B8N5 592 aa14.31□□□□□ -0.12
PABPC1-205ENST00000518196 FBXO47Q5MNV8 452 aa14.31□□□□□ -0.12
PABPC1-205ENST00000518196 TRAF7Q6Q0C0 670 aa14.31□□□□□ -0.12
PABPC1-205ENST00000518196 SFR1Q86XK3 245 aa14.31□□□□□ -0.12
PABPC1-205ENST00000518196 FAM178BQ8IXR5 827 aa14.31□□□□□ -0.12
PABPC1-205ENST00000518196 TTC13Q8NBP0 860 aa14.31□□□□□ -0.12
PABPC1-205ENST00000518196 SMARCE1Q969G3 411 aa14.31□□□□□ -0.12
PABPC1-205ENST00000518196 SCLYQ96I15 445 aa14.31□□□□□ -0.12
PABPC1-205ENST00000518196 NTPCRQ9BSD7 190 aaKnown RBP14.31□□□□□ -0.12
PABPC1-205ENST00000518196 NFKBIZQ9BYH8 718 aa14.31□□□□□ -0.12
PABPC1-205ENST00000518196 WNT8AQ9H1J5 351 aa14.31□□□□□ -0.12
PABPC1-205ENST00000518196 NUP62CLQ9H1M0 184 aa14.31□□□□□ -0.12
PABPC1-205ENST00000518196 CLSTN2Q9H4D0 955 aa14.31□□□□□ -0.12
PABPC1-205ENST00000518196 MRPL44Q9H9J2 332 aaKnown RBP14.31□□□□□ -0.12
PABPC1-205ENST00000518196 IFT122Q9HBG6 1241 aa14.31□□□□□ -0.12
PABPC1-205ENST00000518196 ZMYND8Q9ULU4 1186 aaPredicted RBP14.31□□□□□ -0.12
PABPC1-205ENST00000518196 UMODL1Q5DID0 1318 aa14.31□□□□□ -0.12
PABPC1-205ENST00000518196 PHLPP2Q6ZVD8 1323 aa14.31□□□□□ -0.12
PABPC1-205ENST00000518196 TANC1Q9C0D5 1861 aa14.3□□□□□ -0.12
PABPC1-205ENST00000518196 INO80B-WBP1J3KQ70 363 aa14.3□□□□□ -0.12
PABPC1-205ENST00000518196 K7ENM7 598 aa14.3□□□□□ -0.12
PABPC1-205ENST00000518196 GPR182O15218 404 aa14.3□□□□□ -0.12
PABPC1-205ENST00000518196 KLRC4O43908 158 aa14.3□□□□□ -0.12
PABPC1-205ENST00000518196 RPS6KA5O75582 802 aa14.3□□□□□ -0.12
PABPC1-205ENST00000518196 GHRP10912 638 aa14.3□□□□□ -0.12
PABPC1-205ENST00000518196 SYN1P17600 705 aa14.3□□□□□ -0.12
PABPC1-205ENST00000518196 SFPQP23246 707 aaKnown RBP eCLIP14.3□□□□□ -0.12
PABPC1-205ENST00000518196 NCKAP1LP55160 1127 aa14.3□□□□□ -0.12
PABPC1-205ENST00000518196 PSMD2Q13200 908 aa14.3□□□□□ -0.12
PABPC1-205ENST00000518196 PCBP1Q15365 356 aaKnown RBP eCLIP14.3□□□□□ -0.124e-40■■■□□ 17.7
PABPC1-205ENST00000518196 CAMK4Q16566 473 aa14.3□□□□□ -0.12
PABPC1-205ENST00000518196 KMT5BQ4FZB7 885 aa14.3□□□□□ -0.12
PABPC1-205ENST00000518196 CDCA2Q69YH5 1023 aaPredicted RBP14.3□□□□□ -0.12
PABPC1-205ENST00000518196 TSHZ1Q6ZSZ6 1077 aa14.3□□□□□ -0.12
PABPC1-205ENST00000518196 STXBP4Q6ZWJ1 553 aa14.3□□□□□ -0.12
PABPC1-205ENST00000518196 METTL3Q86U44 580 aaKnown RBP14.3□□□□□ -0.12
PABPC1-205ENST00000518196 RPUSD2Q8IZ73 545 aaKnown RBP14.3□□□□□ -0.12
PABPC1-205ENST00000518196 SYAP1Q96A49 352 aaPredicted RBP14.3□□□□□ -0.12
PABPC1-205ENST00000518196 LBHD1Q9BQE6 289 aaPredicted RBP14.3□□□□□ -0.12
PABPC1-205ENST00000518196 TMEM134Q9H6X4 195 aa14.3□□□□□ -0.12
PABPC1-205ENST00000518196 OLFML3Q9NRN5 406 aa14.3□□□□□ -0.12
PABPC1-205ENST00000518196 RMND1Q9NWS8 449 aa14.3□□□□□ -0.12
PABPC1-205ENST00000518196 NOC2LQ9Y3T9 749 aaKnown RBP14.3□□□□□ -0.12
PABPC1-205ENST00000518196 SCN5AQ14524 2016 aa14.29□□□□□ -0.12
PABPC1-205ENST00000518196 MKI67P46013 3256 aaKnown RBP14.29□□□□□ -0.12
PABPC1-205ENST00000518196 K7ERI5 159 aa14.29□□□□□ -0.12
PABPC1-205ENST00000518196 ITGB8P26012 769 aa14.29□□□□□ -0.12
PABPC1-205ENST00000518196 NCBP1Q09161 790 aaKnown RBP14.29□□□□□ -0.12
PABPC1-205ENST00000518196 STRN3Q13033 797 aa14.29□□□□□ -0.12
PABPC1-205ENST00000518196 PAK2Q13177 524 aa14.29□□□□□ -0.12
PABPC1-205ENST00000518196 PPIGQ13427 754 aaKnown RBP eCLIP14.29□□□□□ -0.12
PABPC1-205ENST00000518196 ALCAMQ13740 583 aa14.29□□□□□ -0.12
PABPC1-205ENST00000518196 LPIN1Q14693 890 aa14.29□□□□□ -0.12
PABPC1-205ENST00000518196 KCNB1Q14721 858 aa14.29□□□□□ -0.12
PABPC1-205ENST00000518196 NFKBIBQ15653 356 aa14.29□□□□□ -0.12
PABPC1-205ENST00000518196 MAPK6Q16659 721 aa14.29□□□□□ -0.12
PABPC1-205ENST00000518196 FAM26FQ5R3K3 315 aa14.29□□□□□ -0.12
PABPC1-205ENST00000518196 FAM43BQ6ZT52 329 aaPredicted RBP14.29□□□□□ -0.12
PABPC1-205ENST00000518196 CATSPER4Q7RTX7 472 aa14.29□□□□□ -0.12
PABPC1-205ENST00000518196 ZNF720Q7Z2F6 126 aa14.29□□□□□ -0.12
PABPC1-205ENST00000518196 HAUS6Q7Z4H7 955 aa14.29□□□□□ -0.12
PABPC1-205ENST00000518196 BADQ92934 168 aa14.29□□□□□ -0.12
PABPC1-205ENST00000518196 GSDMAQ96QA5 445 aa14.29□□□□□ -0.12
PABPC1-205ENST00000518196 KIFC3Q9BVG8 833 aa14.29□□□□□ -0.12
PABPC1-205ENST00000518196 GTPBP4Q9BZE4 634 aaKnown RBP14.29□□□□□ -0.12
PABPC1-205ENST00000518196 PRMT7Q9NVM4 692 aaPredicted RBP14.29□□□□□ -0.12
PABPC1-205ENST00000518196 TBC1D7Q9P0N9 293 aa14.29□□□□□ -0.12
PABPC1-205ENST00000518196 ARHGAP28Q9P2N2 729 aa14.29□□□□□ -0.12
PABPC1-205ENST00000518196 PCDHA5Q9Y5H7 936 aa14.29□□□□□ -0.12
PABPC1-205ENST00000518196 SIP14410 1827 aa14.29□□□□□ -0.12
PABPC1-205ENST00000518196 DENND3A2RUS2 1198 aa14.28□□□□□ -0.12
PABPC1-205ENST00000518196 NBNO60934 754 aa14.28□□□□□ -0.12
PABPC1-205ENST00000518196 CSDE1O75534 798 aaKnown RBP14.28□□□□□ -0.12
PABPC1-205ENST00000518196 ERLIN2O94905 339 aa14.28□□□□□ -0.12
PABPC1-205ENST00000518196 RHOBTB3O94955 611 aa14.28□□□□□ -0.12
PABPC1-205ENST00000518196 GCNT3O95395 438 aa14.28□□□□□ -0.12
PABPC1-205ENST00000518196 CXCL10P02778 98 aa14.28□□□□□ -0.12
PABPC1-205ENST00000518196 PRKCBP05771 671 aa14.28□□□□□ -0.12
PABPC1-205ENST00000518196 PFKMP08237 780 aa14.28□□□□□ -0.12
PABPC1-205ENST00000518196 NMT1P30419 496 aaKnown RBP14.28□□□□□ -0.12
PABPC1-205ENST00000518196 FPGSQ05932 587 aa14.28□□□□□ -0.12
PABPC1-205ENST00000518196 MBTD1Q05BQ5 628 aa14.28□□□□□ -0.12
PABPC1-205ENST00000518196 NFX1Q12986 1120 aaKnown RBP14.28□□□□□ -0.12
PABPC1-205ENST00000518196 MBTPS1Q14703 1052 aa14.28□□□□□ -0.12
PABPC1-205ENST00000518196 KLHL40Q2TBA0 621 aa14.28□□□□□ -0.12
PABPC1-205ENST00000518196 CCDC183Q5T5S1 534 aa14.28□□□□□ -0.12
PABPC1-205ENST00000518196 DEFB128Q7Z7B8 93 aa14.28□□□□□ -0.12
PABPC1-205ENST00000518196 TMEM161BQ8NDZ6 487 aa14.28□□□□□ -0.12
PABPC1-205ENST00000518196 TMEM40Q8WWA1 233 aa14.28□□□□□ -0.12
PABPC1-205ENST00000518196 SEPT8Q92599 483 aa14.28□□□□□ -0.12
PABPC1-205ENST00000518196 APBB2Q92870 758 aa14.28□□□□□ -0.12
PABPC1-205ENST00000518196 PRIMPOLQ96LW4 560 aa14.28□□□□□ -0.12
PABPC1-205ENST00000518196 ST6GALNAC4Q9H4F1 302 aa14.28□□□□□ -0.12
PABPC1-205ENST00000518196 ST3GAL5Q9UNP4 418 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms