RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 CYB5R4Q7L1T6 521 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 FAM35AQ86V20 835 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 SMAP1Q8IYB5 467 aaPredicted RBP3.15□□□□□ -1.9
SKP1-204ENST00000517691 GMCL1P1Q8NEA9 526 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 GPRC5AQ8NFJ5 357 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 CD99L2Q8TCZ2 262 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 JPH3Q8WXH2 748 aaPredicted RBP3.15□□□□□ -1.9
SKP1-204ENST00000517691 LPAR1Q92633 364 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 NINJ1Q92982 152 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 TNFRSF25Q93038 417 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 ERO1AQ96HE7 468 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 TTC14Q96N46 770 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 TMEM47Q9BQJ4 181 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 UBE2OQ9C0C9 1292 aaKnown RBP3.15□□□□□ -1.9
SKP1-204ENST00000517691 IFT122Q9HBG6 1241 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 BRMS1Q9HCU9 246 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 SH2B1Q9NRF2 756 aaPredicted RBP3.15□□□□□ -1.9
SKP1-204ENST00000517691 TCP11L1Q9NUJ3 509 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 OBP2AQ9NY56 170 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 POLG2Q9UHN1 485 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 USP25Q9UHP3 1055 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 SLC6A14Q9UN76 642 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 CYP8B1Q9UNU6 501 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 TRIM33Q9UPN9 1127 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 PLAAQ9Y263 795 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 DIS3Q9Y2L1 958 aaKnown RBP3.15□□□□□ -1.9
SKP1-204ENST00000517691 TAF6LQ9Y6J9 622 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 DOCK2Q92608 1830 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 MYO5AQ9Y4I1 1855 aaKnown RBP3.15□□□□□ -1.9
SKP1-204ENST00000517691 TNKSO95271 1327 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 FRMPD2Q68DX3 1309 aaPredicted RBP3.15□□□□□ -1.91
SKP1-204ENST00000517691 ECM29Q5VYK3 1845 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 CCDC69A6NI79 296 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 WDR46O15213 610 aaKnown RBP3.15□□□□□ -1.91
SKP1-204ENST00000517691 ZBED4O75132 1171 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 SMNDC1O75940 238 aaKnown RBP eCLIP3.15□□□□□ -1.91
SKP1-204ENST00000517691 EYA4O95677 639 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 GOLGA8HP0CJ92 632 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 ESRRAP11474 423 aaPredicted RBP3.15□□□□□ -1.91
SKP1-204ENST00000517691 SELPP16109 830 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 HOXD10P28358 340 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 SLC16A2P36021 539 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 PSMC4P43686 418 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 GCLCP48506 637 aaPredicted RBP3.15□□□□□ -1.91
SKP1-204ENST00000517691 SARSP49591 514 aaKnown RBP3.15□□□□□ -1.91
SKP1-204ENST00000517691 NT5C2P49902 561 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 STAT2P52630 851 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 SNAP25P60880 206 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 CLCQ05315 142 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 PPP2R3AQ06190 1150 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 ITKQ08881 620 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 TBC1D8BQ0IIM8 1120 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 KRT32Q14532 448 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 SETDB1Q15047 1291 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 PCSK7Q16549 785 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 HGSNATQ68CP4 663 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 RCSD1Q6JBY9 416 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 PDXDC1Q6P996 788 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 C17orf99Q6UX52 265 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 SYNE3Q6ZMZ3 975 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 STOX1Q6ZVD7 989 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 KCTD1Q719H9 257 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 CATIPQ7Z7H3 387 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 PDZD3Q86UT5 571 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 AFAP1L2Q8N4X5 818 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 ENAHQ8N8S7 591 aaPredicted RBP3.15□□□□□ -1.91
SKP1-204ENST00000517691 CHURC1Q8WUH1 139 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 NUP133Q8WUM0 1156 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 GAL3ST3Q96A11 431 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 MTMR8Q96EF0 704 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 TRMT2BQ96GJ1 504 aaKnown RBP3.15□□□□□ -1.91
SKP1-204ENST00000517691 C12orf42Q96LP6 360 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 JAKMIP1Q96N16 626 aaKnown RBP3.15□□□□□ -1.91
SKP1-204ENST00000517691 NEK1Q96PY6 1258 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 SLF1Q9BQI6 1058 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 LPIN3Q9BQK8 851 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 CENPOQ9BU64 300 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 SELENOOQ9BVL4 669 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 USP26Q9BXU7 913 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 LRRC2Q9BYS8 371 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 TRIM8Q9BZR9 551 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 ARHGAP39Q9C0H5 1083 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 MIR1-1HGQ9H1L0 117 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 ALDH8A1Q9H2A2 487 aaPredicted RBP3.15□□□□□ -1.91
SKP1-204ENST00000517691 VAT1LQ9HCJ6 419 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 FBXO28Q9NVF7 368 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 CACNA2D2Q9NY47 1150 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 RBPJLQ9UBG7 517 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 ZNF69Q9UC07 566 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 EVLQ9UI08 416 aaPredicted RBP3.15□□□□□ -1.91
SKP1-204ENST00000517691 ZNF180Q9UJW8 692 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 FEM1BQ9UK73 627 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 NOL7Q9UMY1 257 aaKnown RBP3.15□□□□□ -1.91
SKP1-204ENST00000517691 TRIM17Q9Y577 477 aa3.15□□□□□ -1.91
SKP1-204ENST00000517691 ADARB2-AS1A8MUL3 147 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 VWA5AO00534 786 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 SOX1O00570 391 aaPredicted RBP3.14□□□□□ -1.91
SKP1-204ENST00000517691 TNPO2O14787 897 aaKnown RBP3.14□□□□□ -1.91
SKP1-204ENST00000517691 GJB6O95452 261 aa3.14□□□□□ -1.91
SKP1-204ENST00000517691 PARP1P09874 1014 aaKnown RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms