RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 ANK1P16157 1881 aa10.89□□□□□ -0.67
CLN8-202ENST00000517514 CEP290O15078 2479 aa10.89□□□□□ -0.67
CLN8-202ENST00000517514 COL4A6Q14031 1691 aa10.89□□□□□ -0.67
CLN8-202ENST00000517514 TRIP11Q15643 1979 aa10.88□□□□□ -0.67
CLN8-202ENST00000517514 RANBP2P49792 3224 aaKnown RBP10.88□□□□□ -0.67
CLN8-202ENST00000517514 PHLPP2Q6ZVD8 1323 aa10.88□□□□□ -0.67
CLN8-202ENST00000517514 ANKRD63C9JTQ0 380 aa10.88□□□□□ -0.67
CLN8-202ENST00000517514 INO80B-WBP1J3KQ70 363 aa10.88□□□□□ -0.67
CLN8-202ENST00000517514 K7ENM7 598 aa10.88□□□□□ -0.67
CLN8-202ENST00000517514 M0QZ92 97 aa10.88□□□□□ -0.67
CLN8-202ENST00000517514 BIN1O00499 593 aa10.88□□□□□ -0.67
CLN8-202ENST00000517514 TGFB1I1O43294 461 aa10.88□□□□□ -0.67
CLN8-202ENST00000517514 RPS6KA5O75582 802 aa10.88□□□□□ -0.67
CLN8-202ENST00000517514 PRKCBP05771 671 aa10.88□□□□□ -0.67
CLN8-202ENST00000517514 ACRP10323 421 aa10.88□□□□□ -0.67
CLN8-202ENST00000517514 ARF4P18085 180 aaPredicted RBP10.88□□□□□ -0.67
CLN8-202ENST00000517514 PSMD2Q13200 908 aa10.88□□□□□ -0.67
CLN8-202ENST00000517514 BMT2Q1RMZ1 405 aa10.88□□□□□ -0.67
CLN8-202ENST00000517514 UBXN11Q5T124 520 aa10.88□□□□□ -0.67
CLN8-202ENST00000517514 CCDC183Q5T5S1 534 aa10.88□□□□□ -0.67
CLN8-202ENST00000517514 DEFB128Q7Z7B8 93 aa10.88□□□□□ -0.67
CLN8-202ENST00000517514 CDR2LQ86X02 465 aaPredicted RBP10.88□□□□□ -0.67
CLN8-202ENST00000517514 MAP4K3Q8IVH8 894 aa10.88□□□□□ -0.67
CLN8-202ENST00000517514 CPB2Q96IY4 423 aa10.88□□□□□ -0.67
CLN8-202ENST00000517514 ZBTB45Q96K62 511 aaPredicted RBP10.88□□□□□ -0.67
CLN8-202ENST00000517514 MED15Q96RN5 788 aa10.88□□□□□ -0.67
CLN8-202ENST00000517514 TARS2Q9BW92 718 aaKnown RBP10.88□□□□□ -0.67
CLN8-202ENST00000517514 INO80BQ9C086 356 aaPredicted RBP10.88□□□□□ -0.67
CLN8-202ENST00000517514 C2orf40Q9H1Z8 148 aa10.88□□□□□ -0.67
CLN8-202ENST00000517514 PTPRHQ9HD43 1115 aa10.88□□□□□ -0.67
CLN8-202ENST00000517514 AGPAT5Q9NUQ2 364 aa10.88□□□□□ -0.67
CLN8-202ENST00000517514 TTC3P53804 2025 aa10.87□□□□□ -0.67
CLN8-202ENST00000517514 CNTNAP2Q9UHC6 1331 aa10.87□□□□□ -0.67
CLN8-202ENST00000517514 PPP1R3GB7ZBB8 358 aa10.87□□□□□ -0.67
CLN8-202ENST00000517514 K7ERI5 159 aa10.87□□□□□ -0.67
CLN8-202ENST00000517514 ACKR2O00590 384 aa10.87□□□□□ -0.67
CLN8-202ENST00000517514 EIF3DO15371 548 aaKnown RBP eCLIP10.87□□□□□ -0.67
CLN8-202ENST00000517514 SMC2O95347 1197 aa10.87□□□□□ -0.67
CLN8-202ENST00000517514 GCNT3O95395 438 aa10.87□□□□□ -0.67
CLN8-202ENST00000517514 PIGRP01833 764 aa10.87□□□□□ -0.67
CLN8-202ENST00000517514 PTMSP20962 102 aa10.87□□□□□ -0.67
CLN8-202ENST00000517514 PROZP22891 400 aa10.87□□□□□ -0.67
CLN8-202ENST00000517514 ADSSP30520 456 aa10.87□□□□□ -0.67
CLN8-202ENST00000517514 RFC2P35250 354 aa10.87□□□□□ -0.67
CLN8-202ENST00000517514 PRCPP42785 496 aa10.87□□□□□ -0.67
CLN8-202ENST00000517514 EFNA5P52803 228 aa10.87□□□□□ -0.67
CLN8-202ENST00000517514 SMTNP53814 917 aa10.87□□□□□ -0.67
CLN8-202ENST00000517514 COBLL1Q53SF7 1204 aa10.87□□□□□ -0.67
CLN8-202ENST00000517514 L1TD1Q5T7N2 865 aaKnown RBP10.87□□□□□ -0.67
CLN8-202ENST00000517514 ZNF658Q5TYW1 1059 aaPredicted RBP10.87□□□□□ -0.67
CLN8-202ENST00000517514 ZBTB8OSQ8IWT0 167 aa10.87□□□□□ -0.67
CLN8-202ENST00000517514 CRIPAKQ8N1N5 446 aa10.87□□□□□ -0.67
CLN8-202ENST00000517514 USP38Q8NB14 1042 aa10.87□□□□□ -0.67
CLN8-202ENST00000517514 ZSWIM2Q8NEG5 633 aa10.87□□□□□ -0.67
CLN8-202ENST00000517514 SCLT1Q96NL6 688 aa10.87□□□□□ -0.67
CLN8-202ENST00000517514 ACO2Q99798 780 aaKnown RBP10.87□□□□□ -0.67
CLN8-202ENST00000517514 FUCA2Q9BTY2 467 aa10.87□□□□□ -0.67
CLN8-202ENST00000517514 KCTD10Q9H3F6 313 aa10.87□□□□□ -0.67
CLN8-202ENST00000517514 PDZD7Q9H5P4 517 aa10.87□□□□□ -0.67
CLN8-202ENST00000517514 IL23AQ9NPF7 189 aa10.87□□□□□ -0.67
CLN8-202ENST00000517514 PRMT7Q9NVM4 692 aaPredicted RBP10.87□□□□□ -0.67
CLN8-202ENST00000517514 HOOK1Q9UJC3 728 aaKnown RBP10.87□□□□□ -0.67
CLN8-202ENST00000517514 MAPK8IP1Q9UQF2 711 aa10.87□□□□□ -0.67
CLN8-202ENST00000517514 PDCD11Q14690 1871 aaKnown RBP10.87□□□□□ -0.67
CLN8-202ENST00000517514 PDE4DIPQ5VU43 2346 aa10.86□□□□□ -0.67
CLN8-202ENST00000517514 A0A1B0GUA9 196 aa10.86□□□□□ -0.67
CLN8-202ENST00000517514 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.86□□□□□ -0.67
CLN8-202ENST00000517514 H0YGN5 161 aa10.86□□□□□ -0.67
CLN8-202ENST00000517514 MEFVO15553 781 aaPredicted RBP10.86□□□□□ -0.67
CLN8-202ENST00000517514 PARNO95453 639 aaKnown RBP10.86□□□□□ -0.67
CLN8-202ENST00000517514 MAGEA10P43363 369 aaPredicted RBP10.86□□□□□ -0.67
CLN8-202ENST00000517514 PMS1P54277 932 aaKnown RBP10.86□□□□□ -0.67
CLN8-202ENST00000517514 NFX1Q12986 1120 aaKnown RBP10.86□□□□□ -0.67
CLN8-202ENST00000517514 PAK2Q13177 524 aa10.86□□□□□ -0.67
CLN8-202ENST00000517514 MAPK6Q16659 721 aa10.86□□□□□ -0.67
CLN8-202ENST00000517514 SKOR2Q2VWA4 1001 aaPredicted RBP10.86□□□□□ -0.67
CLN8-202ENST00000517514 ZCWPW2Q504Y3 356 aa10.86□□□□□ -0.67
CLN8-202ENST00000517514 TMEM240Q5SV17 173 aa10.86□□□□□ -0.67
CLN8-202ENST00000517514 CATSPER4Q7RTX7 472 aa10.86□□□□□ -0.67
CLN8-202ENST00000517514 NELFCDQ8IXH7 590 aa10.86□□□□□ -0.67
CLN8-202ENST00000517514 ADSSL1Q8N142 457 aa10.86□□□□□ -0.67
CLN8-202ENST00000517514 GUF1Q8N442 669 aaKnown RBP10.86□□□□□ -0.67
CLN8-202ENST00000517514 TMEM199Q8N511 208 aa10.86□□□□□ -0.67
CLN8-202ENST00000517514 HVCN1Q96D96 273 aa10.86□□□□□ -0.67
CLN8-202ENST00000517514 PRIMPOLQ96LW4 560 aa10.86□□□□□ -0.67
CLN8-202ENST00000517514 EIF2AQ9BY44 585 aaKnown RBP10.86□□□□□ -0.67
CLN8-202ENST00000517514 IFIH1Q9BYX4 1025 aaKnown RBP10.86□□□□□ -0.67
CLN8-202ENST00000517514 SEMA6BQ9H3T3 888 aa10.86□□□□□ -0.67
CLN8-202ENST00000517514 PCDHB13Q9Y5F0 798 aa10.86□□□□□ -0.67
CLN8-202ENST00000517514 GBF1Q92538 1859 aa10.86□□□□□ -0.67
CLN8-202ENST00000517514 RALGAPA2Q2PPJ7 1873 aa10.85□□□□□ -0.67
CLN8-202ENST00000517514 FNDC1Q4ZHG4 1894 aaPredicted RBP10.85□□□□□ -0.67
CLN8-202ENST00000517514 CHD9Q3L8U1 2897 aa10.85□□□□□ -0.67
CLN8-202ENST00000517514 ENPP3O14638 875 aa10.85□□□□□ -0.67
CLN8-202ENST00000517514 GPR182O15218 404 aa10.85□□□□□ -0.67
CLN8-202ENST00000517514 FAM189A1O60320 539 aa10.85□□□□□ -0.67
CLN8-202ENST00000517514 ATF7P17544 494 aaPredicted RBP10.85□□□□□ -0.67
CLN8-202ENST00000517514 SFPQP23246 707 aaKnown RBP eCLIP10.85□□□□□ -0.67
CLN8-202ENST00000517514 NLRP12P59046 1061 aa10.85□□□□□ -0.67
CLN8-202ENST00000517514 FAM189BP81408 668 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms