RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 JAK3P52333 1124 aa6.5□□□□□ -1.37
SCARNA6.1-201ENST00000516989 TLE2Q04725 743 aa6.5□□□□□ -1.37
SCARNA6.1-201ENST00000516989 ORC2Q13416 577 aaPredicted RBP6.5□□□□□ -1.37
SCARNA6.1-201ENST00000516989 PKP1Q13835 747 aa6.5□□□□□ -1.37
SCARNA6.1-201ENST00000516989 LRRC26Q2I0M4 334 aa6.5□□□□□ -1.37
SCARNA6.1-201ENST00000516989 KIAA0753Q2KHM9 967 aa6.5□□□□□ -1.37
SCARNA6.1-201ENST00000516989 TMEM266Q2M3C6 531 aa6.5□□□□□ -1.37
SCARNA6.1-201ENST00000516989 TRIM60Q495X7 471 aa6.5□□□□□ -1.37
SCARNA6.1-201ENST00000516989 DTHD1Q6ZMT9 781 aa6.5□□□□□ -1.37
SCARNA6.1-201ENST00000516989 UBE2Q1Q7Z7E8 422 aa6.5□□□□□ -1.37
SCARNA6.1-201ENST00000516989 NLRP8Q86W28 1048 aa6.5□□□□□ -1.37
SCARNA6.1-201ENST00000516989 CKAP2LQ8IYA6 745 aa6.5□□□□□ -1.37
SCARNA6.1-201ENST00000516989 SMAP1Q8IYB5 467 aaPredicted RBP6.5□□□□□ -1.37
SCARNA6.1-201ENST00000516989 PGBD3Q8N328 593 aa6.5□□□□□ -1.37
SCARNA6.1-201ENST00000516989 C7orf31Q8N865 590 aa6.5□□□□□ -1.37
SCARNA6.1-201ENST00000516989 KAT2BQ92831 832 aa6.5□□□□□ -1.37
SCARNA6.1-201ENST00000516989 TNPO1Q92973 898 aaKnown RBP6.5□□□□□ -1.37
SCARNA6.1-201ENST00000516989 ZNF396Q96N95 335 aaPredicted RBP6.5□□□□□ -1.37
SCARNA6.1-201ENST00000516989 MTMR9Q96QG7 549 aa6.5□□□□□ -1.37
SCARNA6.1-201ENST00000516989 CRISPLD1Q9H336 500 aa6.5□□□□□ -1.37
SCARNA6.1-201ENST00000516989 RNPEPQ9H4A4 650 aa6.5□□□□□ -1.37
SCARNA6.1-201ENST00000516989 SUV39H2Q9H5I1 410 aa6.5□□□□□ -1.37
SCARNA6.1-201ENST00000516989 KCNMB3Q9NPA1 279 aa6.5□□□□□ -1.37
SCARNA6.1-201ENST00000516989 ERAP1Q9NZ08 941 aa6.5□□□□□ -1.37
SCARNA6.1-201ENST00000516989 HDAC6Q9UBN7 1215 aa6.5□□□□□ -1.37
SCARNA6.1-201ENST00000516989 ZNF215Q9UL58 517 aaPredicted RBP6.5□□□□□ -1.37
SCARNA6.1-201ENST00000516989 CEP131Q9UPN4 1083 aa6.5□□□□□ -1.37
SCARNA6.1-201ENST00000516989 GRIN2DO15399 1336 aa6.5□□□□□ -1.37
SCARNA6.1-201ENST00000516989 RBBP6Q7Z6E9 1792 aaKnown RBP6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 MYH7BA7E2Y1 1941 aa6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 DCDC2CA8MYV0 355 aa6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 LAD1O00515 517 aa6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 TLR3O15455 904 aaKnown RBP6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 BMP15O95972 392 aa6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 F2P00734 622 aa6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 GNAT1P11488 350 aa6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 HOXD8P13378 290 aaPredicted RBP6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 MARCKSP29966 332 aaPredicted RBP6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 RGS19P49795 217 aa6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 CDK7P50613 346 aa6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 RTP1P59025 263 aa6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 IGBP1P78318 339 aa6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 NUCB2P80303 420 aa6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 MLLT1Q03111 559 aaPredicted RBP6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 PPP2R5CQ13362 524 aa6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 CTTNQ14247 550 aaKnown RBP6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 PLCB4Q15147 1175 aa6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 STK38Q15208 465 aa6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 EPHA7Q15375 998 aa6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 ZRSR1Q15695 479 aaKnown RBP6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 PTGISQ16647 500 aa6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 NFRKBQ6P4R8 1299 aa6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 PLPPR4Q7Z2D5 763 aa6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 CCDC60Q8IWA6 550 aaPredicted RBP6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 TPH2Q8IWU9 490 aa6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 C4orf32Q8N8J7 132 aa6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 RDM1Q8NG50 284 aa6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 SPATA32Q96LK8 384 aa6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 TOX2Q96NM4 488 aa6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 USP28Q96RU2 1077 aa6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 PCYT2Q99447 389 aa6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 GAS2L1Q99501 681 aaPredicted RBP6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 SEZ6LQ9BYH1 1024 aa6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 RAB34Q9BZG1 259 aa6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 TRPV6Q9H1D0 765 aa6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 PRDM5Q9NQX1 630 aaPredicted RBP6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 NRBP2Q9NSY0 501 aa6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 TRMT13Q9NUP7 481 aaKnown RBP6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 SETD4Q9NVD3 440 aa6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 RGL1Q9NZL6 768 aa6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 VAV3Q9UKW4 847 aa6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 DYRK1BQ9Y463 629 aa6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 ATP6V1DQ9Y5K8 247 aa6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 NR2E3Q9Y5X4 410 aa6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 CLIC4Q9Y696 253 aa6.49□□□□□ -1.37
SCARNA6.1-201ENST00000516989 KIAA1217Q5T5P2 1943 aa6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 A0A087WWV3 80 aa6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 IGKV6D-21A0A0A0MT36 114 aa6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 A0A1W2PP55 124 aa6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 C17orf102A2RUQ5 167 aa6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 VWA3AA6NCI4 1184 aa6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 HAS3O00219 553 aa6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 HBP1O60381 514 aa6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 DKC1O60832 514 aaKnown RBP eCLIP6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 SMIM10L2AP0DMW4 78 aa6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 SMIM10L2BP0DMW5 78 aa6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 INSRRP14616 1297 aa6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 NCLP19338 710 aaKnown RBP6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 GSTT1P30711 240 aa6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 QARSP47897 775 aaKnown RBP6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 SLC26A2P50443 739 aa6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 PSMC5P62195 406 aa6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 ZNF200P98182 395 aaPredicted RBP6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 ATP2C1P98194 919 aaPredicted RBP6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 CYP4A11Q02928 519 aa6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 PTPN11Q06124 597 aaPredicted RBP6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 PPFIA1Q13136 1202 aa6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 PDIA5Q14554 519 aa6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 IL17AQ16552 155 aa6.48□□□□□ -1.37
SCARNA6.1-201ENST00000516989 SAMD5Q5TGI4 173 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms