RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 FAM8A1Q9UBU6 413 aa0.15□□□□□ -2.39
RNU6-542P-201ENST00000516405 ICAM5Q9UMF0 924 aa0.15□□□□□ -2.39
RNU6-542P-201ENST00000516405 MTO1Q9Y2Z2 717 aaKnown RBP0.15□□□□□ -2.39
RNU6-542P-201ENST00000516405 PCDHB14Q9Y5E9 798 aa0.15□□□□□ -2.39
RNU6-542P-201ENST00000516405 RBM8AQ9Y5S9 174 aaKnown RBP0.15□□□□□ -2.39
RNU6-542P-201ENST00000516405 F6X3S4 739 aa0.14□□□□□ -2.39
RNU6-542P-201ENST00000516405 H7BY64 318 aa0.14□□□□□ -2.39
RNU6-542P-201ENST00000516405 ICMTO60725 284 aa0.14□□□□□ -2.39
RNU6-542P-201ENST00000516405 FOSP01100 380 aaPredicted RBP0.14□□□□□ -2.39
RNU6-542P-201ENST00000516405 FGBP02675 491 aa0.14□□□□□ -2.39
RNU6-542P-201ENST00000516405 PF4P02776 101 aa0.14□□□□□ -2.39
RNU6-542P-201ENST00000516405 NHLRC4P0CG21 123 aaPredicted RBP0.14□□□□□ -2.39
RNU6-542P-201ENST00000516405 PRF1P14222 555 aa0.14□□□□□ -2.39
RNU6-542P-201ENST00000516405 ARHGAP25P42331 645 aa0.14□□□□□ -2.39
RNU6-542P-201ENST00000516405 HAP1P54257 671 aaPredicted RBP0.14□□□□□ -2.39
RNU6-542P-201ENST00000516405 PMS1P54277 932 aaKnown RBP0.14□□□□□ -2.39
RNU6-542P-201ENST00000516405 CYP4F3Q08477 520 aa0.14□□□□□ -2.39
RNU6-542P-201ENST00000516405 CAMK2GQ13555 558 aaPredicted RBP0.14□□□□□ -2.39
RNU6-542P-201ENST00000516405 KCNC3Q14003 757 aa0.14□□□□□ -2.39
RNU6-542P-201ENST00000516405 FCN2Q15485 313 aa0.14□□□□□ -2.39
RNU6-542P-201ENST00000516405 TCEA2Q15560 299 aa0.14□□□□□ -2.39
RNU6-542P-201ENST00000516405 SLC1A5Q15758 541 aa0.14□□□□□ -2.39
RNU6-542P-201ENST00000516405 METTL24Q5JXM2 366 aa0.14□□□□□ -2.39
RNU6-542P-201ENST00000516405 DMKNQ6E0U4 476 aaPredicted RBP0.14□□□□□ -2.39
RNU6-542P-201ENST00000516405 DGLUCYQ7Z3D6 616 aa0.14□□□□□ -2.39
RNU6-542P-201ENST00000516405 ZNF479Q96JC4 524 aa0.14□□□□□ -2.39
RNU6-542P-201ENST00000516405 DMRTB1Q96MA1 342 aa0.14□□□□□ -2.39
RNU6-542P-201ENST00000516405 CPPED1Q9BRF8 314 aaPredicted RBP0.14□□□□□ -2.39
RNU6-542P-201ENST00000516405 CDIP1Q9H305 208 aa0.14□□□□□ -2.39
RNU6-542P-201ENST00000516405 CDCP1Q9H5V8 836 aa0.14□□□□□ -2.39
RNU6-542P-201ENST00000516405 C12orf49Q9H741 205 aa0.14□□□□□ -2.39
RNU6-542P-201ENST00000516405 SLC6A20Q9NP91 592 aa0.14□□□□□ -2.39
RNU6-542P-201ENST00000516405 PLSCR4Q9NRQ2 329 aa0.14□□□□□ -2.39
RNU6-542P-201ENST00000516405 SERGEFQ9UGK8 458 aa0.14□□□□□ -2.39
RNU6-542P-201ENST00000516405 RCAN3Q9UKA8 241 aa0.14□□□□□ -2.39
RNU6-542P-201ENST00000516405 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP0.13□□□□□ -2.39
RNU6-542P-201ENST00000516405 GOLGA8BA8MQT2 603 aa0.13□□□□□ -2.39
RNU6-542P-201ENST00000516405 GIPC1O14908 333 aa0.13□□□□□ -2.39
RNU6-542P-201ENST00000516405 MAFKO60675 156 aa0.13□□□□□ -2.39
RNU6-542P-201ENST00000516405 PAK4O96013 591 aaPredicted RBP0.13□□□□□ -2.39
RNU6-542P-201ENST00000516405 CFBP00751 764 aa0.13□□□□□ -2.39
RNU6-542P-201ENST00000516405 TUBB4AP04350 444 aa0.13□□□□□ -2.39
RNU6-542P-201ENST00000516405 HLA-DOAP06340 250 aa0.13□□□□□ -2.39
RNU6-542P-201ENST00000516405 NGFRP08138 427 aa0.13□□□□□ -2.39
RNU6-542P-201ENST00000516405 TMEM191BP0C7N4 346 aa0.13□□□□□ -2.39
RNU6-542P-201ENST00000516405 KRT5P13647 590 aa0.13□□□□□ -2.39
RNU6-542P-201ENST00000516405 GM2AP17900 193 aa0.13□□□□□ -2.39
RNU6-542P-201ENST00000516405 KRT9P35527 623 aa0.13□□□□□ -2.39
RNU6-542P-201ENST00000516405 SOX10P56693 466 aa0.13□□□□□ -2.39
RNU6-542P-201ENST00000516405 AMPD2Q01433 879 aa0.13□□□□□ -2.39
RNU6-542P-201ENST00000516405 NHLH2Q02577 135 aa0.13□□□□□ -2.39
RNU6-542P-201ENST00000516405 TCIRG1Q13488 830 aa0.13□□□□□ -2.39
RNU6-542P-201ENST00000516405 SPIDRQ14159 915 aa0.13□□□□□ -2.39
RNU6-542P-201ENST00000516405 MPP2Q14168 576 aa0.13□□□□□ -2.39
RNU6-542P-201ENST00000516405 GAGE13Q4V321 117 aa0.13□□□□□ -2.39
RNU6-542P-201ENST00000516405 XKR4Q5GH76 650 aa0.13□□□□□ -2.39
RNU6-542P-201ENST00000516405 BTNL9Q6UXG8 535 aa0.13□□□□□ -2.39
RNU6-542P-201ENST00000516405 CLEC14AQ86T13 490 aa0.13□□□□□ -2.39
RNU6-542P-201ENST00000516405 KRTAP7-1Q8IUC3 87 aa0.13□□□□□ -2.39
RNU6-542P-201ENST00000516405 LPPQ93052 612 aa0.13□□□□□ -2.39
RNU6-542P-201ENST00000516405 ARL8AQ96BM9 186 aa0.13□□□□□ -2.39
RNU6-542P-201ENST00000516405 DHRS1Q96LJ7 313 aa0.13□□□□□ -2.39
RNU6-542P-201ENST00000516405 MEIS3Q99687 375 aa0.13□□□□□ -2.39
RNU6-542P-201ENST00000516405 LSM14BQ9BX40 385 aaKnown RBP0.13□□□□□ -2.39
RNU6-542P-201ENST00000516405 SPRY4Q9C004 299 aa0.13□□□□□ -2.39
RNU6-542P-201ENST00000516405 FOXP1Q9H334 677 aaPredicted RBP0.13□□□□□ -2.39
RNU6-542P-201ENST00000516405 EPB41L1Q9H4G0 881 aa0.13□□□□□ -2.39
RNU6-542P-201ENST00000516405 GSTO2Q9H4Y5 243 aa0.13□□□□□ -2.39
RNU6-542P-201ENST00000516405 CASS4Q9NQ75 786 aa0.13□□□□□ -2.39
RNU6-542P-201ENST00000516405 CGGBP1Q9UFW8 167 aaPredicted RBP0.13□□□□□ -2.39
RNU6-542P-201ENST00000516405 A0A0B4J293 547 aa0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 PRR23AA6NEV1 266 aa0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 TISP43B9A030 160 aa0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 H3BNX3 289 aa0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 KRIT1O00522 736 aa0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 HOXA3O43365 443 aaPredicted RBP0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 CFIP05156 583 aa0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 ELANEP08246 267 aa0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 FGF3P11487 239 aaPredicted RBP0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 LCP1P13796 627 aa0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 SREBF1P36956 1147 aa0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 GTF2A2P52657 109 aa0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 MAPK10P53779 464 aa0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 EPHA5P54756 1037 aa0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 LMNB2Q03252 620 aa0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 DSC3Q14574 896 aa0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 NFATC4Q14934 902 aa0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 NEUROD2Q15784 382 aa0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 PROSER3Q2NL68 480 aa0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 C14orf177Q52M58 125 aa0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 METRNLQ641Q3 311 aa0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 KIAA0895LQ68EN5 471 aa0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 PHLDB3Q6NSJ2 640 aa0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 ADAM5Q6NVV9 412 aa0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 SHC4Q6S5L8 630 aa0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 LRSAM1Q6UWE0 723 aa0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 MSL3Q8N5Y2 521 aaKnown RBP0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 RCBTB1Q8NDN9 531 aa0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 C16orf52Q8NHV5 167 aa0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 NPLOC4Q8TAT6 608 aa0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms